Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ambrosiozyma_20kashinagacola_20[genbank_20GCA_5F001599075.1_202016- 03-01] 23 sequences; 12,320,962 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq3 147 5e-30 seq5 109 1e-18 >seq3 Length=1585198 Score = 147 bits (162), Expect = 5e-30 Identities = 164/219 (75%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958 ||||| ||| | ||| | |||||| || ||||||||||| ||||| | | ||| || || Sbjct 1231549 TCTTAAGACCAAGTGTAAAGTGGATTCCTTTTGGATGTTGTAATCGGACAAGGTTCTACC 1231490 Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018 ||||| | ||||| || |||||||| | | |||||| ||||| || | |||||||| Sbjct 1231489 GTCTTCTAATTGCTTACCGGCGAAGATCAATCTTTGTTGATCAGGTGGGATACCTTCCTT 1231430 Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078 ||| |||||||| || || || || || ||||||||| ||| ||||| | |||||| Sbjct 1231429 GTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAGGATTCGACCTCTAAAGTGAT 1231370 Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 ||||| || || | ||||| ||||| | ||||| || Sbjct 1231369 GGTCTTACCTGTTAAGGTCTTAACAAAAATTTGCATGTT 1231331 >seq5 Length=915096 Score = 109 bits (120), Expect = 1e-18 Identities = 126/170 (74%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958 ||| | ||| | ||| | ||||| || ||||||||||| || || | ||| || || || Sbjct 587577 TCTCAAGACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCGGAAAGAGTTCTACC 587636 Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018 |||||| | ||||| || || ||||| | | |||||| || || || | |||||||| Sbjct 587637 ATCTTCTAATTGCTTACCAGCAAAGATTAATCTTTGTTGATCTGGTGGGATACCTTCCTT 587696 Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCT 211068 ||| ||||| || ||| || || || ||||| |||||| |||||||| Sbjct 587697 GTCTTGGATTTTAGATTTGACATTGTCAATGGTATCAGAGGATTCAACCT 587746 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159151658412395