Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ambrosiozyma_20kashinagacola_20[genbank_20GCA_5F001599075.1_202016-
03-01] 23 sequences; 12,320,962 total letters
Query= NC_029997.1
Length=105667
Score E
Sequences producing significant alignments: (Bits) Value
seq14 138 8e-28
seq3 125 5e-24
seq5 84.2 1e-11
>seq14
Length=138463
Score = 138 bits (152), Expect = 8e-28
Identities = 181/246 (74%), Gaps = 5/246 (2%)
Strand=Plus/Minus
Query 23598 TTAATTACTTAAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGA 23657
||||||| || ||||| ||||||||||| ||| | || || || || |||||| | ||
Sbjct 121021 TTAATTA--TAGGATGCAAATTTTCGTTAAGACCTTAACTGGTAAGACCATCACTTTAGA 120964
Query 23658 AGTTGACTCCACGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTG 23716
||||| ||| | |||||| |||| ||| | || | || | || || || ||||||
Sbjct 120963 GGTTGAATCCTCTGACACTATTGACAATGTCAAGTCTAAGA-TTCAAGATAAGGAAGGTA 120905
Query 23717 TACCGCCAGATCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTT 23776
| || || |||||||| | ||||| ||||| || || ||| | ||||| | | ||||
Sbjct 120904 TCCCACCTGATCAACAAAGATTAATCTTTGCTGGTAAGCAATTAGAAGATGGTAGAACTT 120845
Query 23777 TAGGCGATTACAACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAG 23836
|| ||||||||||| ||||| || || || || || || |||||||| ||| |||| |
Sbjct 120844 TATCTGATTACAACATTCAAAAGGAATCAACCTTGCACTTGGTTTTAAGATTGAGAGGTG 120785
Query 23837 G-ATCA 23841
| ||||
Sbjct 120784 GTATCA 120779
>seq3
Length=1585198
Score = 125 bits (138), Expect = 5e-24
Identities = 168/231 (73%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667
|| ||||| ||||| ||||| ||| | || || || || |||||| | || || || |||
Sbjct 1231331 AACATGCAAATTTTTGTTAAGACCTTAACAGGTAAGACCATCACTTTAGAGGTCGAATCC 1231390
Query 23668 ACGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGA 23726
| |||||| |||| ||| | || | || | | ||||| |||||| | || || ||
Sbjct 1231391 TCTGACACTATTGACAATGTCAAGTCCAAGA-TCCAAGACAAGGAAGGTATCCCACCTGA 1231449
Query 23727 TCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTA 23786
|||||| | || || || ||||| || ||| | ||||||| | || || ||||||
Sbjct 1231450 TCAACAAAGATTGATCTTCGCCGGTAAGCAATTAGAAGACGGTAGAACCTTGTCCGATTA 1231509
Query 23787 CAACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837
|||||| ||||| || ||||| ||||| || || ||||| ||| |||| ||
Sbjct 1231510 CAACATCCAAAAGGAATCCACTTTACACTTGGTCTTAAGATTGAGAGGTGG 1231560
>seq5
Length=915096
Score = 84.2 bits (92), Expect = 1e-11
Identities = 128/180 (71%), Gaps = 2/180 (1%)
Strand=Plus/Minus
Query 23659 GTTGACTCCACGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGT 23717
||||| ||| | || || |||| ||| | ||| | |||| | ||||| |||||| |
Sbjct 587744 GTTGAATCCTCTGATACCATTGACAATGTCAAATCTAAAA-TCCAAGACAAGGAAGGTAT 587686
Query 23718 ACCGCCAGATCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTT 23777
|| ||||||||||| | ||||| ||||| || || ||| | ||||| | | ||| |
Sbjct 587685 CCCACCAGATCAACAAAGATTAATCTTTGCTGGTAAGCAATTAGAAGATGGTAGAACTCT 587626
Query 23778 AGGCGATTACAACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837
||| |||||||| ||||| || ||||| || || || || || || || |||| ||
Sbjct 587625 TTCCGACTACAACATCCAAAAGGAATCCACCTTGCACTTGGTCTTGAGATTAAGAGGTGG 587566
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 338009505251684
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |