Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ambrosiozyma_20kashinagacola_20[genbank_20GCA_5F001599075.1_202016- 03-01] 23 sequences; 12,320,962 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq14 138 8e-28 seq3 125 5e-24 seq5 84.2 1e-11 >seq14 Length=138463 Score = 138 bits (152), Expect = 8e-28 Identities = 181/246 (74%), Gaps = 5/246 (2%) Strand=Plus/Minus Query 23598 TTAATTACTTAAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGA 23657 ||||||| || ||||| ||||||||||| ||| | || || || || |||||| | || Sbjct 121021 TTAATTA--TAGGATGCAAATTTTCGTTAAGACCTTAACTGGTAAGACCATCACTTTAGA 120964 Query 23658 AGTTGACTCCACGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTG 23716 ||||| ||| | |||||| |||| ||| | || | || | || || || |||||| Sbjct 120963 GGTTGAATCCTCTGACACTATTGACAATGTCAAGTCTAAGA-TTCAAGATAAGGAAGGTA 120905 Query 23717 TACCGCCAGATCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTT 23776 | || || |||||||| | ||||| ||||| || || ||| | ||||| | | |||| Sbjct 120904 TCCCACCTGATCAACAAAGATTAATCTTTGCTGGTAAGCAATTAGAAGATGGTAGAACTT 120845 Query 23777 TAGGCGATTACAACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAG 23836 || ||||||||||| ||||| || || || || || || |||||||| ||| |||| | Sbjct 120844 TATCTGATTACAACATTCAAAAGGAATCAACCTTGCACTTGGTTTTAAGATTGAGAGGTG 120785 Query 23837 G-ATCA 23841 | |||| Sbjct 120784 GTATCA 120779 >seq3 Length=1585198 Score = 125 bits (138), Expect = 5e-24 Identities = 168/231 (73%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 || ||||| ||||| ||||| ||| | || || || || |||||| | || || || ||| Sbjct 1231331 AACATGCAAATTTTTGTTAAGACCTTAACAGGTAAGACCATCACTTTAGAGGTCGAATCC 1231390 Query 23668 ACGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGA 23726 | |||||| |||| ||| | || | || | | ||||| |||||| | || || || Sbjct 1231391 TCTGACACTATTGACAATGTCAAGTCCAAGA-TCCAAGACAAGGAAGGTATCCCACCTGA 1231449 Query 23727 TCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTA 23786 |||||| | || || || ||||| || ||| | ||||||| | || || |||||| Sbjct 1231450 TCAACAAAGATTGATCTTCGCCGGTAAGCAATTAGAAGACGGTAGAACCTTGTCCGATTA 1231509 Query 23787 CAACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 |||||| ||||| || ||||| ||||| || || ||||| ||| |||| || Sbjct 1231510 CAACATCCAAAAGGAATCCACTTTACACTTGGTCTTAAGATTGAGAGGTGG 1231560 >seq5 Length=915096 Score = 84.2 bits (92), Expect = 1e-11 Identities = 128/180 (71%), Gaps = 2/180 (1%) Strand=Plus/Minus Query 23659 GTTGACTCCACGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGT 23717 ||||| ||| | || || |||| ||| | ||| | |||| | ||||| |||||| | Sbjct 587744 GTTGAATCCTCTGATACCATTGACAATGTCAAATCTAAAA-TCCAAGACAAGGAAGGTAT 587686 Query 23718 ACCGCCAGATCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTT 23777 || ||||||||||| | ||||| ||||| || || ||| | ||||| | | ||| | Sbjct 587685 CCCACCAGATCAACAAAGATTAATCTTTGCTGGTAAGCAATTAGAAGATGGTAGAACTCT 587626 Query 23778 AGGCGATTACAACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 ||| |||||||| ||||| || ||||| || || || || || || || |||| || Sbjct 587625 TTCCGACTACAACATCCAAAAGGAATCCACCTTGCACTTGGTCTTGAGATTAAGAGGTGG 587566 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338009505251684