Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ambrosiozyma_20kashinagacola_20[genbank_20GCA_5F001599075.1_202016-
03-01] 23 sequences; 12,320,962 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq3 170 5e-37
seq14 149 1e-30
seq5 129 1e-24
seq11 105 2e-17
>seq3
Length=1585198
Score = 170 bits (188), Expect = 5e-37
Identities = 169/219 (77%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557
||| | ||| | ||| | ||||||||| ||||||| |||||||||| ||| ||||| ||
Sbjct 1231549 TCTTAAGACCAAGTGTAAAGTGGATTCCTTTTGGATGTTGTAATCGGACAAGGTTCTACC 1231490
Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617
||||||| ||||| || |||||||| | || |||||| || || || |||||||||||
Sbjct 1231489 GTCTTCTAATTGCTTACCGGCGAAGATCAATCTTTGTTGATCAGGTGGGATACCTTCCTT 1231430
Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677
|||||||||||| ||| ||| || || ||||| |||| ||| || ||||| |||||
Sbjct 1231429 GTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAGGATTCGACCTCTAAAGTGAT 1231370
Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716
||||| || || || || || | || | |||||| ||
Sbjct 1231369 GGTCTTACCTGTTAAGGTCTTAACAAAAATTTGCATGTT 1231331
>seq14
Length=138463
Score = 149 bits (164), Expect = 1e-30
Identities = 151/197 (77%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 225517 GTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCA 225576
|| ||||| ||||| | |||||||| | |||||||| |||||||||| ||||| |||
Sbjct 120814 GTTGATTCCTTTTGAATGTTGTAATCAGATAAAGTTCTACCATCTTCTAATTGCTTACCA 120873
Query 225577 GCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTC 225636
|| ||||| | || |||||| || || || ||||||||||| ||||| ||||| |||
Sbjct 120874 GCAAAGATTAATCTTTGTTGATCAGGTGGGATACCTTCCTTATCTTGAATCTTAGACTTG 120933
Query 225637 ACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTT 225696
||| || || ||||| |||| ||| || ||||| ||||| ||||| || || || ||
Sbjct 120934 ACATTGTCAATAGTGTCAGAGGATTCAACCTCTAAAGTGATGGTCTTACCAGTTAAGGTC 120993
Query 225697 TTTATGAACACTTGCAT 225713
|| | ||| | ||||||
Sbjct 120994 TTAACGAAAATTTGCAT 121010
>seq5
Length=915096
Score = 129 bits (142), Expect = 1e-24
Identities = 133/174 (76%), Gaps = 0/174 (0%)
Strand=Plus/Plus
Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557
||||| ||| | ||| | |||||||| ||||||| ||||| |||| | |||||| ||
Sbjct 587577 TCTCAAGACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCGGAAAGAGTTCTACC 587636
Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617
|||||||| ||||| ||||| ||||| | || |||||| || || || |||||||||||
Sbjct 587637 ATCTTCTAATTGCTTACCAGCAAAGATTAATCTTTGTTGATCTGGTGGGATACCTTCCTT 587696
Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
||||||||| || || ||| || ||||| || |||| ||| || | |||
Sbjct 587697 GTCTTGGATTTTAGATTTGACATTGTCAATGGTATCAGAGGATTCAACCTATAA 587750
>seq11
Length=430679
Score = 105 bits (116), Expect = 2e-17
Identities = 88/108 (81%), Gaps = 0/108 (0%)
Strand=Plus/Minus
Query 4470 GAATATTTGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACC 4529
||| ||||||||||||||||| || ||||| || || || ||||||||||| ||||||||
Sbjct 130268 GAAAATTTGACCATCAGTAATGGAAATAACGTTAGTTGGAATATAAGCAGAGACATCACC 130209
Query 4530 TGCTTGTGTTTCGACAACAGGTAAGGCTGTTAGTGATCCACCACCAAA 4577
|||| ||||| | ||| |||||||| || | || |||||||| ||
Sbjct 130208 ACCTTGAGTTTCAATAACTGGTAAGGCAGTCAAGGAACCACCACCTAA 130161
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1192530848575962
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |