Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ambrosiozyma_20kashinagacola_20[genbank_20GCA_5F001599075.1_202016- 03-01] 23 sequences; 12,320,962 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq3 170 5e-37 seq14 149 1e-30 seq5 129 1e-24 seq11 105 2e-17 >seq3 Length=1585198 Score = 170 bits (188), Expect = 5e-37 Identities = 169/219 (77%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557 ||| | ||| | ||| | ||||||||| ||||||| |||||||||| ||| ||||| || Sbjct 1231549 TCTTAAGACCAAGTGTAAAGTGGATTCCTTTTGGATGTTGTAATCGGACAAGGTTCTACC 1231490 Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617 ||||||| ||||| || |||||||| | || |||||| || || || ||||||||||| Sbjct 1231489 GTCTTCTAATTGCTTACCGGCGAAGATCAATCTTTGTTGATCAGGTGGGATACCTTCCTT 1231430 Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677 |||||||||||| ||| ||| || || ||||| |||| ||| || ||||| ||||| Sbjct 1231429 GTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAGGATTCGACCTCTAAAGTGAT 1231370 Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 ||||| || || || || || | || | |||||| || Sbjct 1231369 GGTCTTACCTGTTAAGGTCTTAACAAAAATTTGCATGTT 1231331 >seq14 Length=138463 Score = 149 bits (164), Expect = 1e-30 Identities = 151/197 (77%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 225517 GTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCA 225576 || ||||| ||||| | |||||||| | |||||||| |||||||||| ||||| ||| Sbjct 120814 GTTGATTCCTTTTGAATGTTGTAATCAGATAAAGTTCTACCATCTTCTAATTGCTTACCA 120873 Query 225577 GCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTC 225636 || ||||| | || |||||| || || || ||||||||||| ||||| ||||| ||| Sbjct 120874 GCAAAGATTAATCTTTGTTGATCAGGTGGGATACCTTCCTTATCTTGAATCTTAGACTTG 120933 Query 225637 ACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTT 225696 ||| || || ||||| |||| ||| || ||||| ||||| ||||| || || || || Sbjct 120934 ACATTGTCAATAGTGTCAGAGGATTCAACCTCTAAAGTGATGGTCTTACCAGTTAAGGTC 120993 Query 225697 TTTATGAACACTTGCAT 225713 || | ||| | |||||| Sbjct 120994 TTAACGAAAATTTGCAT 121010 >seq5 Length=915096 Score = 129 bits (142), Expect = 1e-24 Identities = 133/174 (76%), Gaps = 0/174 (0%) Strand=Plus/Plus Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557 ||||| ||| | ||| | |||||||| ||||||| ||||| |||| | |||||| || Sbjct 587577 TCTCAAGACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCGGAAAGAGTTCTACC 587636 Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617 |||||||| ||||| ||||| ||||| | || |||||| || || || ||||||||||| Sbjct 587637 ATCTTCTAATTGCTTACCAGCAAAGATTAATCTTTGTTGATCTGGTGGGATACCTTCCTT 587696 Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||||||||| || || ||| || ||||| || |||| ||| || | ||| Sbjct 587697 GTCTTGGATTTTAGATTTGACATTGTCAATGGTATCAGAGGATTCAACCTATAA 587750 >seq11 Length=430679 Score = 105 bits (116), Expect = 2e-17 Identities = 88/108 (81%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 4470 GAATATTTGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACC 4529 ||| ||||||||||||||||| || ||||| || || || ||||||||||| |||||||| Sbjct 130268 GAAAATTTGACCATCAGTAATGGAAATAACGTTAGTTGGAATATAAGCAGAGACATCACC 130209 Query 4530 TGCTTGTGTTTCGACAACAGGTAAGGCTGTTAGTGATCCACCACCAAA 4577 |||| ||||| | ||| |||||||| || | || |||||||| || Sbjct 130208 ACCTTGAGTTTCAATAACTGGTAAGGCAGTCAAGGAACCACCACCTAA 130161 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192530848575962