Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ambrosiozyma_20kashinagacola_20[genbank_20GCA_5F001599075.1_202016- 03-01] 23 sequences; 12,320,962 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq5 403 2e-107 seq3 215 7e-51 >seq5 Length=915096 Score = 403 bits (446), Expect = 2e-107 Identities = 1388/2142 (65%), Gaps = 53/2142 (2%) Strand=Plus/Plus Query 76773 TTATCCAATGTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGATAGTACATACCA 76832 ||||| | ||| || ||||| | || | |||| || || | | ||||||||||| Sbjct 37868 TTATCAACTGTGAATTGAATGGCAGCGGCGGCGGCTTGAGTTCTCAAGTAGTACATACCG 37927 Query 76833 GTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTAGGA 76892 || |||| |||| |||| |||||||| |||||| |||| || | | ||| Sbjct 37928 GTCTTTAAACCCTTCTTCCAACCGTAGAAGTGCATGGAAGTCAACTTACCCATAGTTGGA 37987 Query 76893 TCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCC 76952 | | || || ||||| || ||| |||||| | | |||| ||||| ||||| | | Sbjct 37988 GCTCTCAAGTGGATGTTCATAGATTGAGATTGATCAACGTAAGCACCTCTGTCAGCAGAC 38047 Query 76953 ATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCA 77012 || | || || | |||||||| ||||||||||| || || | | |||||| | ||| Sbjct 38048 ATATCAATGATAGACTTTTGAGAAATTTCCCAAACGGTCTTATACAATTGTTTTAATTCA 38107 Query 77013 TCTGGAAGGTTTGTA---TTTTGAATGGAACCACCATCTGATATAATTGTATTCTTTATA 77069 || |||| ||||| ||||||||||||||| ||| || ||||| ||||| ||| Sbjct 38108 TCAGGAACGTTTGGCAAGTTTTGAATGGAACCATTATCAGAAATAATGTGGTTCTTCATA 38167 Query 77070 TCATCATTCCACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGAGGATTAACTATTTGA 77129 |||| ||| ||| || ||| |||| | | | || ||||| ||||| Sbjct 38168 GAGTCATCCCATAATCCAAGGTCAACCAAATCTCTCAACAAGTATGGGTTAACAATTTGG 38227 Query 77130 AATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCA 77189 ||||| |||| | ||||| | || ||||||||| || |||||||| | | ||||| Sbjct 38228 AATTCACCAGCTAGCACTCTTCTAGAGTAAATATTGGAAGTGTATGGTTCGAAACATTCA 38287 Query 77190 TTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTATTT 77249 |||| ||||| ||||| | |||||||||||||||||| || || | ||||| ||| Sbjct 38288 TTGTAACCCAAGATTTGGGAAGTAGAAGCAGTTGGCATTGGAGCAAGTAATAAGGAGTTT 38347 Query 77250 CTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGAAGGT 77309 || | ||||| || ||||| | || || | | | ||| ||||| | ||| | || Sbjct 38348 CTTAAACCATTGGTCATGATTCTTTCCTTCAAGTTATCCCAGTCCCATAAATCAGTTGGC 38407 Query 77310 ACAACATCCCAAAGATCGTATTGTAGAATTCCGTTACTAGCATATGATCCATTATATGTT 77369 | |||| | |||| |||| | || || | ||| || || | | | ||| Sbjct 38408 TTCTTACCCCATAAATCGAATTGCAAGATACCTTGGGAAGCTGGAGAACCTTCAAAAGTT 38467 Query 77370 TCATAAGGTCCTTCTGTTTCAGCTAGTTCACAACTCGCTTCCAATGCTCCGTAATAAATT 77429 ||||| |||||| |||| ||| || || || || || | |||| Sbjct 38468 TCATACTTACCTTCTTCGATGGCTAATTCGACGGAGGCCTCTAAAGCACCATGGTAAAGG 38527 Query 77430 GTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCAAACGGATAATGTAAA 77489 ||||| || || | | || | || ||||| | ||||| ||| | | | | Sbjct 38528 GTTTCAAAGATTTGAATGTTTAACAATTTAGCTTCTGGAGAGTCAAATGGA-ATTCTCAG 38586 Query 77490 AGA-ATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATT 77548 | || || ||||| ||||| || ||||| |||| |||||||||| | |||| | || Sbjct 38587 TAACATGAATGCATCAGCTAAACCTTGAACACCAAGGGCAATAGGTCTGTTTCTCATGTT 38646 Query 77549 GGAAATTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAATTTTATTGAGATTTCT 77608 ||| | |||| | || || |||||||| |||| ||||| ||||| | | |||| Sbjct 38647 AGAACGTCTAGCAGTTTCAACTGGGTAATAATTTCTGTCGATAATCTTATTCA-AGTTCT 38705 Query 77609 AACA-ACTACTTTAACCACGTCCTTTAGTTTAAGAAAAT-----CAAATCTTC----CAT 77658 | | || || || | | || | || || ||| | ||| | ||| ||| Sbjct 38706 TAGAGACAACCTTGGCGATCTCGTGTAACTTTTCAAAGTTGTACCAAGTGTTCTTCTCAT 38765 Query 77659 CT-AT--AACAAACATGTTCAAAG--CTATAGATGCTAGATTACAAACTGCTACCTCATT 77713 | || |||||| | | ||| | || || || | ||||| || || || | Sbjct 38766 CAGATTCAACAAAG--GCTGGAAGGGCAATGGAAGCCAAGTTACACACAGCGGTTTCTTG 38823 Query 77714 AGCGTTGGCATATTGTATTATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGATT 77773 | | || |||| | || || ||| | || | || || | |||| || Sbjct 38824 TTCATCGGAGTATTCAACAATTTCACAACACAAGTTGGAGGACTTAATCATACCCAAGTT 38883 Query 77774 TTGTTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTTC 77833 | ||||||| || || || || | ||||| || | || || || || || || || Sbjct 38884 CTTTTGGTTGGATTTCTTGTTACAGGCATCCTTGTATAACATGAATGGGGTACCAGTCTC 38943 Query 77834 AATCTGTGATTCGATAATAGATTTCCAGACGACTCT--AGCTTTTATCATAGATTTGTA- 77890 | | || | ||| | || || | ||| | ||| | ||| || || | ||| | Sbjct 38944 AGTTTGAGCTTCTAAGATGGAGTACCATA--ACTTTTGAGCCTTGATAGTGGATCTACCC 39001 Query 77891 TCGCCTCTCTCTTTCATATTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACATCATC 77950 | ||| |||||||| ||| ||| | ||| |||||||| || | |||||| | Sbjct 39002 TTACCT-TCTCTTTCGTATCTTTCATACAATTCTTCGAATTCATCACCGTAGACATCACC 39060 Query 77951 CAATCCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTT 78010 || || || |||| |||| | | ||| | ||| ||||||| | ||||| || Sbjct 39061 TAAACCTGGAGCTTCAGATGGGGAGAACAAAGTCCATTCACCATTAGATTCAACTCTCTT 39120 Query 78011 CATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATT 78070 ||| || | ||| || ||||||| || || | ||||| | ||| |||||| || Sbjct 39121 CATGAATAAATCTGGGATCCATAAGGCTGGGAACAAATCTCTAGCTCTGATTTCTTCCTT 39180 Query 78071 TCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATA 78130 || |||||| ||| || | ||| || | ||||||| ||||||||||| | || Sbjct 39181 ACCGTGGTTCTTTCTAATGTCAATAAAATCAAAGATATCAGCGTGCCATGGTTCAATGTA 39240 Query 78131 TATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATT 78190 | || | | | || |||| || ||||| || ||||| | |||||||||||||| || Sbjct 39241 CAAGGCAAAAGCACCTGGTCTCTTGTTACCACCTTGATCAACGTATCTGGCGGTGTTGTT 39300 Query 78191 ATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACT 78250 | ||||||| ||||||||| ||||||||||| || || || || |||| || ||| Sbjct 39301 GAACACTCTCACCATTGGAATGATACCGTTAGAGGTACCGTTAGTACCAGCGATGTAAGA 39360 Query 78251 TCCACTTGCGCGAATATTACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAG 78310 || | || | ||||| ||| || ||| || || || || ||||||| || || Sbjct 39361 ACCGGTAGCTCTGATATTGTGGATGTGTAACCCAATACCACCAGCGGTCTTAGAAATCAG 39420 Query 78311 AGCGCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGTTAAGAAG 78370 ||| || ||||| |||||||| || || || || ||||||| ||||| || | Sbjct 39421 AGCACATTCCTTCAAAGTATCGTAAATCCCTTCAATGGAGTCATCCTTCATGGCAACTAA 39480 Query 78371 AAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATG 78430 ||||| ||||||||| | ||| ||| || |||||||| || || ||||| || || Sbjct 39481 GAAACAAGAAGACATTTGTGGGTGAGGAGTACCAGCATTAAACAAAGTTGGAGACGCGTG 39540 Query 78431 CGTAAACCATTTTTCAGAAAGTAGATTGTATGTTTCAAT-AGCT----GATTCTATGTCC 78485 || || || | ||||| | | ||| || |||||||| | || ||| ||| || Sbjct 39541 AGTGAAGTATCTCTCAGACATCAAATTATAGGTTTCAATCACCTTTGGGATATTATCACC 39600 Query 78486 CATTGATGAATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTA 78545 || || || | || || | ||| | ||| |||||||| || | |||| Sbjct 39601 -----GTGGATACCAATGGCGACTCTCATGGTTAAATGTTGAGGTCTCTCGGCAACCTTA 39655 Query 78546 TTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TG 78603 | ||| | || ||||| ||| ||||||| || ||||| || ||||| || || || Sbjct 39656 CCGTCGATTCTTAATAAGTAAGATCTTTCCAAGGTCTTAAACCCGAAATAATTATAACTG 39715 Query 78604 AAAAGTCTCTCTCGTAAATAATAACAGAATTTAGT--TTATCTTTGTATTTGGTAACAAT 78661 ||| || | || |||| ||| |||| |||| | || || || ||||| ||||| Sbjct 39716 AAA--TCACGGTCATAAACGATAGCAGAGTTTAATTCTTCACTGTGCTTTTGG--ACAAT 39771 Query 78662 ATCCATGACAGTA---GTTGAAATAATAGGAGATCGTACACCATTTTTAGGATTAACATA 78718 ||| | |||| | || | ||||| ||| || ||||| || || || || || Sbjct 39772 ATC---GTAAGTATCCTTGGACACCATAGGGGATGGTTTCCCATTCTTTGGGTTGACGTA 39828 Query 78719 GTTAAATAAATCTTCCATTACATCACTAAATAGtttttttGTTTCCTTGTGTAGATTAGA 78778 | | | | ||| || || | | || | ||| | |||| |||||| | ||||| Sbjct 39829 AGTGTAAAGTTGTTCAATAACTTGAGAGAACTGCTTTGTCGTTTGCTTGTGCAAGTTAGA 39888 Query 78779 TACAGCTATTCTTGCAGCTAGAATAGCATAATCAGGATGTTGTGTAGTACAAGTGGCTGC 78838 | || ||||| ||||||| || |||||||| ||||| ||||| | || || Sbjct 39889 GATGGCGATTCTAGCAGCTAAAACGGCATAATCTGGATGAACAGTAGTCATATAAGCAGC 39948 Query 78839 TATTTCTGCCGCTAAAATATCTAACTCTATAGTTGTGACCCC 78880 |||| || || || |||| || || || || || || || Sbjct 39949 AGTTTCAGCAGCCAAGTTATCCAATTCAATGGTGGTCACACC 39990 >seq3 Length=1585198 Score = 215 bits (238), Expect = 7e-51 Identities = 573/866 (66%), Gaps = 12/866 (1%) Strand=Plus/Minus Query 47871 TTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTTCCATAAAATCAAATGGATTA 47930 || ||||| || ||||| || || |||| || || || ||||| || || ||||| || Sbjct 913926 TTTTCGAAGAAGTTAGTCTTACCAGCCAAGGAGATGTTCTCCATGAAGTCGAATGGGTTG 913867 Query 47931 ACTGCATTATAAAtttttttAAATCCTAATTCTGAAATCAGTCTATCTGCAACGAATTCT 47990 |||| ||||| || ||| | || | | | | |||||| || |||||||| Sbjct 913866 GTAACATTGTAAATCTTCTTACAACCGAGGGCAACTAATAATCTATCAGCGACGAATTCA 913807 Query 47991 ATATATCTTTTCATCATTTCACAATTCATTCCTATAAGTTTAACTGGTAGAGCCTCCGT- 48049 | ||| ||| | ||||| ||||| |||| | || ||||| | || || || Sbjct 913806 ACGTATTGACACATTAAATCACAGTTCATACCTAATAACTTGACTGGCAAGGCATCGGTG 913747 Query 48050 AAGAAACTCTTGTTCGATAGTGACAGCATCCACTATTATCGATGTTACCGTTTCCTCACT 48109 ||| | ||||| ||| || ||||| || || ||| | || | ||| Sbjct 913746 AAGTATCTCTT-TTCAATGTCAACAGCTTCGGTGATGATCTTAGCAACAATGCTTTCATC 913688 Query 48110 TGGTGGATACAACAAATGTTTAAACATTAAACATGCAAAATCACAATGAAGACCTTCATC 48169 ||| | | ||| || |||| || ||| ||||| ||| || | ||||||||| Sbjct 913687 TGGAGTGTTATTCAAGTGAGAGAACAATAGACAAGCAAAGTCAGTGTGTAAACCTTCATC 913628 Query 48170 TCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCA 48229 ||||| || ||||||||||| || || | ||| ||||||| || | || || | ||| Sbjct 913627 TCTACAGATGAATTCGTTAGAGAAAGTTAAACCTGGCATTAAACCTCTCTTCTTCAACCA 913568 Query 48230 AAATATTGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGCGGTAAG 48289 || || | || || || ||||| ||||| || || || ||||| || || || | Sbjct 913567 GAAGATGGAAGCAAAGGAACCAGAGAAGAAGATACCCTCAACGGCAGCGAAGGCAACCAA 913508 Query 48290 TCTCTCTCCGTAACTGGCT---TCGTTGTGTATCCACCGTTGTGCCCAATCAGCCTTCTT 48346 ||| || ||| | |||| || | | ||||| | | ||||| |||||||| || Sbjct 913507 TCTTTCACCGAATAAGGCTTCATCATCGGAGATCCATCTTAAGGCCCATTCAGCCTT-TT 913449 Query 48347 CT-TTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAAGtttttttCATTGCTATCTT 48405 || | | ||| || || ||| || || || || | | | ||| || ||| | Sbjct 913448 CTCTAATACATGGGATGTGTTCAATGGCGTTGAATAAGTAATCAGCTTCCTTTGGATCCT 913389 Query 48406 TAACGTAAGTATCTATTAAAAGACTATACATTTCGGAGTGAATATTTTCAATTGCCATCT 48465 |||||||||| || || || | || | || ||||| || ||||| || || | Sbjct 913388 TAACGTAAGTGTCGATCAATAAGGAGTAAGTCTCAGAGTGTATGTTTTCCATCATGATTT 913329 Query 48466 GAAATCCGTAAAAACATCTCGCTTCTGTGATCTGTACCTCCGTACAAAATCGTTCAGCCA 48525 | || ||||| |||||| | ||||||| ||| || || || | | | || |||| ||| Sbjct 913328 GGAAACCGTAGAAACATTTGGCTTCTGGGATTTGCACTTCAGCAGAGAAGTTTTCAACCA 913269 Query 48526 AATTCTCATTTACTATTCCATCACTAGCAGCAAAAAATGCTAATACATGTTTA-ATAAAA 48584 |||| ||||| || || |||||| ||||| || || ||||| || | | | || || Sbjct 913268 AATTTTCATTGACAATACCATCAGATGCAGCGAAGAAGGCTAACAC-TCTAGAGATGAAG 913210 Query 48585 TATTTTTCGTTGGAAGTCAGT---TTATTCCAGTCATTGATATCTTTTGATATATCTACT 48641 ||| |||||||| | ||| | || |||||||| | | || || |||| ||| | | Sbjct 913209 TATCTTTCGTTGTCATTCAATCTGTTGTTCCAGTCGTGTAAGTCCTTGGATAAATCAATT 913150 Query 48642 TCTTCAGCTGTCCAAAATGATGCCTCTGCTTTTTTATACATATTCCATATATCACTGTAT 48701 ||||| || ||||| || || || || || || || ||||| | ||| || || ||| Sbjct 913149 TCTTCGGCAGTCCAGAAGGAAGCTTCGGCCTTCTTGTACATTTGCCAGATCTCGTGATAT 913090 Query 48702 TGGATTGGGAAAATAACAAATCTATT 48727 | ||||||||| | || ||||| || Sbjct 913089 TTGATTGGGAATAAGACGAATCTCTT 913064 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694668600282720