Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ambrosiozyma_20kashinagacola_20[genbank_20GCA_5F001599075.1_202016- 03-01] 23 sequences; 12,320,962 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq14 89.7 1e-12 seq3 89.7 1e-12 >seq14 Length=138463 Score = 89.7 bits (98), Expect = 1e-12 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 151908 GTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCG 151967 || || || ||||| ||||||||||| | ||||||||| |||||||||| || || Sbjct 120814 GTTGATTCCTTTTGAATGTTGTAATCAGATAAAGTTCTACCATCTTCTAATTGCTTACCA 120873 Query 151968 GCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTG 152027 || ||||| | || || || || | | ||| |||||||| |||||||| || ||| Sbjct 120874 GCAAAGATTAATCTTTGTTGATCAGGTGGGATACCTTCCTTATCTTGAATCTTAGACTTG 120933 Query 152028 ACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTC 152087 ||| | || | |||| || || || || | ||| || || || || || | ||| Sbjct 120934 ACATTGTCAATAGTGTCAGAGGATTCAACCTCTAAAGTGATGGTCTTACCAGTTAAGGTC 120993 Query 152088 TTCACGAAGACCTGCAT 152104 || ||||| | ||||| Sbjct 120994 TTAACGAAAATTTGCAT 121010 >seq3 Length=1585198 Score = 89.7 bits (98), Expect = 1e-12 Identities = 147/211 (70%), Gaps = 1/211 (0%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| || | ||| || || ||||||||||||||||||| || ||||| || ||||||| Sbjct 1231540 CAAG-TGTAAAGTGGATTCCTTTTGGATGTTGTAATCGGACAAGGTTCTACCGTCTTCTA 1231482 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 || ||||||||||| | || || || || | | ||| |||||||| ||||| | Sbjct 1231481 ATTGCTTACCGGCGAAGATCAATCTTTGTTGATCAGGTGGGATACCTTCCTTGTCTTGGA 1231422 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | || |||||| | || | |||| || || || || | ||| || || || | Sbjct 1231421 TCTTGGACTTGACATTGTCAATAGTGTCAGAGGATTCGACCTCTAAAGTGATGGTCTTAC 1231362 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 | || | ||||| || || | ||||| || Sbjct 1231361 CTGTTAAGGTCTTAACAAAAATTTGCATGTT 1231331 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153820459983433