Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ambrosiozyma_20kashinagacola_20[genbank_20GCA_5F001599075.1_202016-
03-01] 23 sequences; 12,320,962 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq3 158 3e-33
seq14 134 3e-26
seq5 102 2e-16
>seq3
Length=1585198
Score = 158 bits (174), Expect = 3e-33
Identities = 168/219 (77%), Gaps = 2/219 (1%)
Strand=Plus/Minus
Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG-CAAGCGTGCGGCCATCCTC 282949
|||| ||||| ||| ||| |||||||||||||| || | |||| || | || || ||
Sbjct 1231542 ACCAAGTGTAAAGTGGATTCCTTTTGGATGTTGTAATCGGACAAG-GTTCTACCGTCTTC 1231484
Query 282950 TAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTG 283009
|| ||| || ||||| |||||||| | |||||| ||| || ||||| |||||||||||
Sbjct 1231483 TAATTGCTTACCGGCGAAGATCAATCTTTGTTGATCAGGTGGGATACCTTCCTTGTCTTG 1231424
Query 283010 GATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTT 283069
|||||| | || || | || |||||||| || | |||||| || | |||||| |||||
Sbjct 1231423 GATCTTGGACTTGACATTGTCAATAGTGTCAGAGGATTCGACCTCTAAAGTGATGGTCTT 1231364
Query 283070 ACCCGTCAAAGTCTTAACGAATATCTGCATTTTCATATA 283108
||| || || |||||||| || || ||||| || ||||
Sbjct 1231363 ACCTGTTAAGGTCTTAACAAAAATTTGCATGTTGTTATA 1231325
>seq14
Length=138463
Score = 134 bits (148), Expect = 3e-26
Identities = 145/192 (76%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967
||| ||||| |||||||| |||| | || | ||||| |||| ||| || || |||||
Sbjct 120819 TTCCTTTTGAATGTTGTAATCAGATAAAGTTCTACCATCTTCTAATTGCTTACCAGCAAA 120878
Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027
||| || | |||||| ||| || ||||| ||||| ||||| ||||| | || || |
Sbjct 120879 GATTAATCTTTGTTGATCAGGTGGGATACCTTCCTTATCTTGAATCTTAGACTTGACATT 120938
Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087
|| |||||||| || | ||| || || | |||||| |||||||| || || ||||||||
Sbjct 120939 GTCAATAGTGTCAGAGGATTCAACCTCTAAAGTGATGGTCTTACCAGTTAAGGTCTTAAC 120998
Query 283088 GAATATCTGCAT 283099
||| || |||||
Sbjct 120999 GAAAATTTGCAT 121010
>seq5
Length=915096
Score = 102 bits (112), Expect = 2e-16
Identities = 119/161 (74%), Gaps = 0/161 (0%)
Strand=Plus/Plus
Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCT 282950
|||| || || ||| ||| ||||||||||||||||| | ||| || | ||||| |||
Sbjct 587584 ACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCGGAAAGAGTTCTACCATCTTCT 587643
Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010
| ||| || || |||||||| || | |||||| || || ||||| ||||||||||||
Sbjct 587644 AATTGCTTACCAGCAAAGATTAATCTTTGTTGATCTGGTGGGATACCTTCCTTGTCTTGG 587703
Query 283011 ATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
|| || | ||| || | || || || || || | ||| ||
Sbjct 587704 ATTTTAGATTTGACATTGTCAATGGTATCAGAGGATTCAAC 587744
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046738891539042
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |