Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ambrosiozyma_20kashinagacola_20[genbank_20GCA_5F001599075.1_202016- 03-01] 23 sequences; 12,320,962 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq3 158 3e-33 seq14 134 3e-26 seq5 102 2e-16 >seq3 Length=1585198 Score = 158 bits (174), Expect = 3e-33 Identities = 168/219 (77%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG-CAAGCGTGCGGCCATCCTC 282949 |||| ||||| ||| ||| |||||||||||||| || | |||| || | || || || Sbjct 1231542 ACCAAGTGTAAAGTGGATTCCTTTTGGATGTTGTAATCGGACAAG-GTTCTACCGTCTTC 1231484 Query 282950 TAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTG 283009 || ||| || ||||| |||||||| | |||||| ||| || ||||| ||||||||||| Sbjct 1231483 TAATTGCTTACCGGCGAAGATCAATCTTTGTTGATCAGGTGGGATACCTTCCTTGTCTTG 1231424 Query 283010 GATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTT 283069 |||||| | || || | || |||||||| || | |||||| || | |||||| ||||| Sbjct 1231423 GATCTTGGACTTGACATTGTCAATAGTGTCAGAGGATTCGACCTCTAAAGTGATGGTCTT 1231364 Query 283070 ACCCGTCAAAGTCTTAACGAATATCTGCATTTTCATATA 283108 ||| || || |||||||| || || ||||| || |||| Sbjct 1231363 ACCTGTTAAGGTCTTAACAAAAATTTGCATGTTGTTATA 1231325 >seq14 Length=138463 Score = 134 bits (148), Expect = 3e-26 Identities = 145/192 (76%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 ||| ||||| |||||||| |||| | || | ||||| |||| ||| || || ||||| Sbjct 120819 TTCCTTTTGAATGTTGTAATCAGATAAAGTTCTACCATCTTCTAATTGCTTACCAGCAAA 120878 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027 ||| || | |||||| ||| || ||||| ||||| ||||| ||||| | || || | Sbjct 120879 GATTAATCTTTGTTGATCAGGTGGGATACCTTCCTTATCTTGAATCTTAGACTTGACATT 120938 Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 || |||||||| || | ||| || || | |||||| |||||||| || || |||||||| Sbjct 120939 GTCAATAGTGTCAGAGGATTCAACCTCTAAAGTGATGGTCTTACCAGTTAAGGTCTTAAC 120998 Query 283088 GAATATCTGCAT 283099 ||| || ||||| Sbjct 120999 GAAAATTTGCAT 121010 >seq5 Length=915096 Score = 102 bits (112), Expect = 2e-16 Identities = 119/161 (74%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCT 282950 |||| || || ||| ||| ||||||||||||||||| | ||| || | ||||| ||| Sbjct 587584 ACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCGGAAAGAGTTCTACCATCTTCT 587643 Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010 | ||| || || |||||||| || | |||||| || || ||||| |||||||||||| Sbjct 587644 AATTGCTTACCAGCAAAGATTAATCTTTGTTGATCTGGTGGGATACCTTCCTTGTCTTGG 587703 Query 283011 ATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || || | ||| || | || || || || || | ||| || Sbjct 587704 ATTTTAGATTTGACATTGTCAATGGTATCAGAGGATTCAAC 587744 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046738891539042