Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ambrosiozyma_20kashinagacola_20[genbank_20GCA_5F001599075.1_202016- 03-01] 23 sequences; 12,320,962 total letters Query= NC_033423.1 Length=208501 Score E Sequences producing significant alignments: (Bits) Value seq12 183 4e-41 seq10 86.0 8e-12 >seq12 Length=324105 Score = 183 bits (202), Expect = 4e-41 Identities = 409/609 (67%), Gaps = 24/609 (4%) Strand=Plus/Plus Query 50412 ATATGGGACGCTCACGGTTCCAGATCAAATTTAGATCGTTTAGGATTTAATTACAGAAAC 50471 || ||||| | | |||| || ||| | ||||||| ||||||||| | | | |||| Sbjct 266669 ATTTGGGATGGTAACGGATCTAGAGAATATTTAGACTCTTTAGGATTAACTGAAAGAAGA 266728 Query 50472 AAAGGAGATTTAGGACCTGTTTACGGTTTTCAATGGAGACATTTTGGAGCGCGTTACATA 50531 |||| |||||||| || ||||| || || ||||||||||| ||||| || || | | Sbjct 266729 GAAGGCGATTTAGGTCCAGTTTATGGATTCCAATGGAGACACTTTGGTGCAGAGTATACA 266788 Query 50532 AATTGCGACGTAAATTACGAAGGTCAAGGCGTG-GATCAACTGCAAAAAATTATAACGAC 50590 |||| || | ||||| ||| |||| || |||||| | |||||||| || Sbjct 266789 GATTGTGATGCTGATTACTCTGGT-AAGGGGTATGATCAATTAGCTAAAATTATTGATAC 266847 Query 50591 GTTGAAAACAAACCCCGACGATCGGCGTATTTTAATGACCGCCTGGAATCCAACCGATAT 50650 ||||||| || || ||||| | | ||| | | | || ||||||||| | | | Sbjct 266848 TTTGAAAAATAATCCATACGATAGAAGAATTATTTTATCTGCATGGAATCCACCTGCATT 266907 Query 50651 AGATCAAACCGTTTTACCTCCGTGTCATGTTTTATGTCAATTTTATGCCA------CAGA 50704 | ||| | ||||| || |||||||| || |||||||| |||| | || | Sbjct 266908 CAAGGAAATGGCATTACCACCATGTCATGTGTTTTGTCAATTCTATGTGAACTTCCCAAA 266967 Query 50705 CAATGTT------------TTATCCTGTCAATGTTATCAAAGATCAGCTGATATGGGTTT 50752 ||| ||||| |||||| ||||||||||| ||||||||| || Sbjct 266968 AGATGGAGGTAAACCAAGATTATCATGTCAAATGTATCAAAGATCTTGTGATATGGGATT 267027 Query 50753 AGGCGTTCCTTTCAACGTAGCTTCTTACGCTTTATTAACGTATTTGATCGCTCAAGCCGT 50812 ||| || |||||||| | || ||||| | ||||| || || |||| ||||| || Sbjct 267028 AGGTGTGCCTTTCAATATTGCATCTTATTCATTATTGACTTACATGATTGCTCACATTGT 267087 Query 50813 CGATATGAAACCGGGAGAATTTATTCATACGTTAGGAGACGCTCATATTTACCTCGATCA 50872 |||||| |||| || ||||| ||||| || | || || ||||| | ||| ||||| Sbjct 267088 GGATATGGAACCAGGTGAATTCATTCACACTATGGGTGATTCTCATGTGTACTGTGATCA 267147 Query 50873 CGTCGATGCTTTAAAGGAGCAATTGACTCGAACG-GTAAAGCCGGCGCCGATTTTAATTT 50931 ||| ||||| || || || ||| ||| | || | || ||| | | | || || | Sbjct 267148 CGTTGATGCATTGAAAGAACAAATGAGTAGAGTGCCTAGAGCATTCCCTAAATTGAAGAT 267207 Query 50932 TAAAGAAAAAATCGATCGAACTAAGAGATTTTAAATTTGAAGATTTCG-AATTGTTGGAT 50990 | |||| || | | || | ||||| |||||||| ||||||| ||||||| ||| Sbjct 267208 T-AAGAGAACAGTTACTGATATCGATGATTTCAAATTTGATGATTTCGAAATTGTT-GAT 267265 Query 50991 TACGATCCT 50999 ||| ||||| Sbjct 267266 TACAATCCT 267274 >seq10 Length=448533 Score = 86.0 bits (94), Expect = 8e-12 Identities = 111/151 (74%), Gaps = 2/151 (1%) Strand=Plus/Minus Query 63748 CCAGAAATAGGTGATAAATTTGCTTCTTTTACA-GCTCAAAAAGGTACGTGTGGTATGAT 63806 ||| |||| |||||||||||||| ||| ||| | |||||| ||||| ||||| | Sbjct 399084 CCACAAATTGGTGATAAATTTGCCTCTAG-ACATGGTCAAAAGGGTACCATCGGTATTAC 399026 Query 63807 TTATCGACAAGAAGATATGCCTTTTACCAAAGACGGTATCGTACCCGATCTCGTCATCAA 63866 ||| |||| ||||||||||| || || | ||| | || || ||| | | ||||| Sbjct 399025 ATATAGACATGAAGATATGCCATTCACTGCTCAAGGTTTAGTGCCAGATTTAATTATCAA 398966 Query 63867 TCCACACGCTTTTCCCAGTCGTATGACCGTT 63897 |||||| ||| |||| ||||||||| ||| Sbjct 398965 TCCACATGCTATTCCTTCTCGTATGACTGTT 398935 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 667075008215880