Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ambrosiozyma_20kashinagacola_20[genbank_20GCA_5F001599075.1_202016- 03-01] 23 sequences; 12,320,962 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq14 125 2e-23 seq3 123 6e-23 >seq14 Length=138463 Score = 125 bits (138), Expect = 2e-23 Identities = 159/219 (73%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||||||||| || || | || || || || ||||| | ||||| ||| ||| ||| Sbjct 121007 CAAATTTTCGTTAAGACCTTAACTGGTAAGACCATCACTTTAGAGGTTGAATCCTCTGAC 120948 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || ||||| |||||||| || || ||||| ||||| || || || ||| Sbjct 120947 ACTATTGACAATGTCAAGTCTAAGATTCAAGATAAGGAAGGTATCCCACCTGATCAACAA 120888 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | ||||| || || || || | |||||||| || ||| | | ||||| ||| | Sbjct 120887 AGATTAATCTTTGCTGGTAAGCAATTAGAAGATGGTAGAACTTTATCTGATTACAACATT 120828 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 ||||| |||||||| |||| | ||||| ||| | ||| Sbjct 120827 CAAAAGGAATCAACCTTGCACTTGGTTTTAAGATTGAGA 120789 >seq3 Length=1585198 Score = 123 bits (136), Expect = 6e-23 Identities = 146/195 (75%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 |||||||| || || || | ||||| || || ||||| | ||||| ||| ||| ||| Sbjct 1231337 CAAATTTTTGTTAAGACCTTAACAGGTAAGACCATCACTTTAGAGGTCGAATCCTCTGAC 1231396 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || ||||| ||||| || ||||| ||||| ||||| || || || ||| Sbjct 1231397 ACTATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATCCCACCTGATCAACAA 1231456 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGT 178102 || | ||||||||||| || || | ||||| || || || |||| ||||||| ||| | Sbjct 1231457 AGATTGATCTTCGCCGGTAAGCAATTAGAAGACGGTAGAAC-CTTGTCCGATTACAACAT 1231515 Query 178103 CCAAAAAGAATCAAC 178117 |||||| ||||| || Sbjct 1231516 CCAAAAGGAATCCAC 1231530 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203730845275462