Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ambrosiozyma_20monospora_20[genbank_20GCA_5F001599995.1_202016-03-
01] 118 sequences; 24,978,438 total letters
Query= NC_001266.1
Length=159857
Score E
Sequences producing significant alignments: (Bits) Value
seq12 221 1e-52
>seq12
Length=722896
Score = 221 bits (244), Expect = 1e-52
Identities = 580/874 (66%), Gaps = 16/874 (2%)
Strand=Plus/Minus
Query 15912 TTTGGTAATCACTAACGCGTTTTTCGAAGAAGTTAGTTTTTCCCTCTAAAGATATATTTT 15971
|||| || ||| ||| | || |||||||||||||| || || | || || |||||||
Sbjct 314443 TTTGATAGTCAGAAACTCTCTTCTCGAAGAAGTTAGTCTTACCAGCCAAGGAAATATTTT 314384
Query 15972 CCATAAAATCAAAGGGATTAGTAGCTGAAAATATCTTAGAGTACCCCAGTTCCGTAACTA 16031
|||| || || || || || || | | ||||| | | |||| | | |
Sbjct 314383 CCATGAAGTCGAATGGGTTTGTGACGTTGTAGATCTTCTTGCATCCCAAAGCAACCAACA 314324
Query 16032 ATCTATCTGCTACAAATTCTATATATTGACACATTAAGTCGCAATTAATTCCTAT-AAGT 16090
|||| || || |||||||| | ||||||||||| ||||| || || || || | || |
Sbjct 314323 ATCTGTCAGCAACAAATTCAACGTATTGACACATCAAGTCACAGTTCATACCCAACAACT 314264
Query 16091 CGTACCGGAAGAGCTTTTGTTAAAAATTGTTGTTCTATCACAACCGCTTCTTTAATGATA 16150
| || || | ||| | || || || | ||| || |||| ||||| | || ||
Sbjct 314263 TG-ACTGGCAAAGCATCAGTGAAGTATCTCTTTTCAATGTCAACGGCTTCAGTGATAATC 314205
Query 16151 TCGGTGGCTCGTGTTTCAGACGGTGTATGGTTTAGGTGTTTAAACATTAGACACGCGAAG 16210
| || | | |||| || || | ||| | ||| || | | ||| |||||
Sbjct 314204 TTGGCAACAATTTCTTCATCTGGGGTGTTGTTCAAGTGAGAGAATAACAAACAAGCGAAA 314145
Query 16211 TCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCTGGCATT 16270
|| ||| || ||||| ||||| | ||| | |||||| || ||||| || ||||||||
Sbjct 314144 TCAGTATGCAGACCTTCATCTCTACAGATCAATTCGTTAGAGAAAGTCAAACCTGGCATC 314085
Query 16271 TTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAAAAGAATATACCCTCA 16330
|||| ||||| |||||||| || |||||||| || || || ||||| |||||||||
Sbjct 314084 AAACCTCTCTTCTTCAACCAGAAGATGGCAGCAAAAGAACCAGAGAAGAAAATACCCTCA 314025
Query 16331 ACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTTATTACGAATCCATTTC 16390
|||| ||||| || | |||| ||| | || ||||| || || | ||||||| ||
Sbjct 314024 ACAGCAGCAAAGGCAACCAATCTTTCACCAAACAAAGCATTTTCATCAGAAATCCATCTC 313965
Query 16391 TGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTT-TCTATGGCCTTAAACAATTT 16449
|||| || ||||||| | | |||| || | |||| || || || || || ||
Sbjct 313964 AAAGCCCAGTCCGCTTTTTCTCTGATAC-ATGGAACGTTATCAATAGCATTGAATAAGAA 313906
Query 16450 CTCTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAAACTGTACATTTCTGAGTG 16509
|| ||||| ||| | | ||| || ||||||| || | ||| |||| |||||
Sbjct 313905 ATCAGCTTCCTTTGGATCCTTGACATAAGTGTCAATCAATAGAGAGTAAGTTTCAGAGTG 313846
Query 16510 TATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCCGCTATTTGTACTTC 16569
||||| || || || || || || ||||| || ||| || | | ||| |||||
Sbjct 313845 GATGTTTTCCATCATGATTTGGAAACCGTAGAAACACTTAGCTTCAGGAACTTGAACTTC 313786
Query 16570 CACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCACTTGCAGCAAAAAACGC 16629
| | || ||| ||| ||| ||||| || ||||| || |||||||| || ||
Sbjct 313785 AGCAGAGAAGTTTTCAACCAAGTTTTCATTGACAATACCATCGGAAGCAGCAAAGAAAGC 313726
Query 16630 CAATATGTGCT-TA---ATGAAATATTTTTCGTCAG-ATGTAA--GAATATGCCAATCTT 16682
||| | || || ||||||||| |||| | || || || | | ||| || |
Sbjct 313725 CAAAA----CTCTAGACATGAAATATCTTTCATTAGCATTCAACTTGTTGTTCCAGTCAT 313670
Query 16683 TTAAATCTTTGGATATATCCACTTCTTCTGGCGTCCAAAAGCTAGCCACTGCCTTTTTAT 16742
||||| || || | ||| | ||||| | ||||| || ||| || ||| || |
Sbjct 313669 CCAAATCCTTAGACAAATCAATCTCTTCAGCAGTCCAGAAAGAAGCTTCTTGCTTCTTGT 313610
Query 16743 ACATTTTCCAAATATCATTGTA-TTGTATGGGAA 16775
|||||| ||| || |||| ||| ||| ||||||
Sbjct 313609 ACATTTGCCAGATTTCATGGTACTTGATTGGGAA 313576
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511413645663760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |