Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ambrosiozyma_20monospora_20[genbank_20GCA_5F001599995.1_202016-03-
01] 118 sequences; 24,978,438 total letters
Query= NC_001962.1
Length=128413
Score E
Sequences producing significant alignments: (Bits) Value
seq3 109 5e-19
seq17 98.7 8e-16
seq40 89.7 4e-13
>seq3
Length=1000385
Score = 109 bits (120), Expect = 5e-19
Identities = 161/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 25034 AATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGC 25093
||||||||| || | || || ||||| || || || |||||| ||| ||| | |
Sbjct 936521 AATGCAAATTTTTGTTAAGACCTTGACTGGTAAGACAATTACCTTGGAAGTTGAATCTTC 936462
Query 25094 AGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCA 25153
|| || | | | || ||||| || || ||||| |||||| | || |||||
Sbjct 936461 CGACACCATTGACAATGTCAAGTCCAAGATCCAAGATAAGGAAGGTATCCCACCTGATCA 936402
Query 25154 ACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAA 25213
||||||| | |||||||| || || ||||||||||| | ||| || |||| |||||
Sbjct 936401 ACAAAGATTGATCTTTGCCGGTAAGCAATTGGAAGACGGTAGAACCTTGTCCGACTACAA 936342
Query 25214 TATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261
|||||||||||||| ||| | ||| |||| || |||| |||| ||
Sbjct 936341 CATTCAAAAGGAATCCACTTTGCACTTGGTTTTGAGATTGAGAGGTGG 936294
>seq17
Length=626534
Score = 98.7 bits (108), Expect = 8e-16
Identities = 102/134 (76%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 25128 GATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAATTGGAA 25187
|| || |||||| | || || ||||||||| | || ||||| || || |||||||||
Sbjct 620883 GACAAGGAAGGTATCCCACCTGACCAACAAAGATTGATTTTTGCTGGTAAGCAATTGGAA 620824
Query 25188 GATTCCAAAACTATGGCCGATTACAATATTCAAAAGGAATCTACTCTTCACATGGTGTTA 25247
||| | |||| || | || ||||| |||||||||||||| ||||||||| |||| ||
Sbjct 620823 GATGGTAGAACTTTGTCTGACTACAACATTCAAAAGGAATCCACTCTTCACTTGGTTTTG 620764
Query 25248 CGATTACGAGGAGG 25261
|||| |||| ||
Sbjct 620763 AGATTGAGAGGTGG 620750
>seq40
Length=167105
Score = 89.7 bits (98), Expect = 4e-13
Identities = 99/134 (74%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 25128 GATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAATTGGAA 25187
||||| |||||| | || || ||||||||| | || || || || || ||||| |||
Sbjct 19629 GATAAGGAAGGTATTCCACCTGACCAACAAAGATTGATTTTCGCTGGTAAGCAATTAGAA 19688
Query 25188 GATTCCAAAACTATGGCCGATTACAATATTCAAAAGGAATCTACTCTTCACATGGTGTTA 25247
||| | ||| || | || ||||| || ||||||||||| || |||||| |||||||
Sbjct 19689 GATGGTAGAACYTTGTCTGACTACAACATYCAAAAGGAATCAACWCTTCACTTGGTGTTG 19748
Query 25248 CGATTACGAGGAGG 25261
|||| |||| ||
Sbjct 19749 AGATTGAGAGGTGG 19762
Score = 86.0 bits (94), Expect = 5e-12
Identities = 99/134 (74%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 25128 GATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAATTGGAA 25187
||||| || ||| | || |||||||| ||| | || || || || || ||||| |||
Sbjct 19857 GATAAGGAGGGTATTCCACCTGATCAACAGAGATTAATTTTCGCTGGTAAGCAATTAGAA 19916
Query 25188 GATTCCAAAACTATGGCCGATTACAATATTCAAAAGGAATCTACTCTTCACATGGTGTTA 25247
||| | ||| || | || ||||| || ||||||||||| ||||||||| |||| |||
Sbjct 19917 GATGGTAGAACYTTGTCTGACTACAACATCCAAAAGGAATCAACTCTTCACTTGGTTTTA 19976
Query 25248 CGATTACGAGGAGG 25261
|||| |||| ||
Sbjct 19977 AGATTGAGAGGTGG 19990
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 410796209222852
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |