Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ambrosiozyma_20monospora_20[genbank_20GCA_5F001599995.1_202016-03- 01] 118 sequences; 24,978,438 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq20 167 4e-36 seq40 147 3e-30 seq3 132 7e-26 >seq20 Length=536142 Score = 167 bits (184), Expect = 4e-36 Identities = 386/575 (67%), Gaps = 14/575 (2%) Strand=Plus/Plus Query 205407 ACCAATATTATGAATAAATTCATATGGTTTTAAATTAGTTAAATGTGCAATCATATAAGT 205466 ||| || |||| || |||||| |||| | || | | ||| |||||||||||||| Sbjct 409714 ACCCATGGTATGTATGAATTCACCAGGTTCCATATCAACGACATGAGCAATCATATAAGT 409773 Query 205467 CAATAAACTATAACTAGCAACATTAAATGGTACACCTAAACCCATATCAGCTGATCTTTG 205526 ||| ||| |||| ||| | ||| || || ||||| | |||||||||| |||||||| Sbjct 409774 CAACAAAGCATAAGAAGCGATATTGAAAGGAACACCAAGACCCATATCACAAGATCTTTG 409833 Query 205527 ATACATTTGACATGT-AAGATA--TTTA--TTATT------AATT-ACATGAAATTGTAC 205574 |||||||||||| | || | |||| || || |||| |||| |||||| || Sbjct 409834 ATACATTTGACAACTCAATCTTGGTTTACCTTCTTTTGGGAAATTCACATAAAATTG-AC 409892 Query 205575 AAAACA-ATGACAAGGTGGTATAACCATATTTTCAACATCTATAGGATTCCAGGCTGTTA 205633 |||| | |||||| || || | |||||| || | | || || ||||| |||| | Sbjct 409893 AAAAGACATGACATGGAGGCAATGCCATATCTTTGAAAGCTGGTGGGTTCCAAGCTGACA 409952 Query 205634 ATATTATATTTCTAGATTCAGGtttattttttattttatttatAATATGTGTTAATTGAT 205693 || || ||||| | || || ||||| | | |||| || | || | | ||||| Sbjct 409953 TAATGATTCTTCTATCATATGGATTGTTTTTCAATGTATTGATGACTTGAGCGAGTTGAT 410012 Query 205694 CAAATCCTTGATTTGTATAATTTGTATCCATATCAATATATTTAGCACCAAAATGACGCC 205753 |||| ||||| ||| || | || ||| || | |||| ||||| ||||| | || Sbjct 410013 CAAAACCTTGTCCTGTGTAGTCTGCATCACAGTCCTTGTATTCCGCACCGAAATGTCTCC 410072 Query 205754 ATTGAAAACCATAAACTGGACCTAAATCACCTTCTTTTCTATCATTAAAACCACGttttt 205813 |||| || ||||| ||||||||||| ||||||||| |||| | | | || || | Sbjct 410073 ATTGGAATCCATACACTGGACCTAAGTCACCTTCTCTTCTGTGAGTTAATCCTAAGGAAT 410132 Query 205814 ttatatattttaatgatccattttcatcccaaatatggattcctttattttttaGAATAT 205873 | || | | ||||||||| | |||||||| | | ||||| | || | | Sbjct 410133 CCAAGTACTCTCTTGATCCATTACCTTCCCAAATTTTAACACCTTTGGCTGATAATAGCT 410192 Query 205874 TTGTATTAGTTGATCCAGATATAAACCATAATAATTCTTCAACAATTCCTCTCCAAAACA 205933 | | || || ||||||||||||| | ||| | || ||| ||| | |||| | Sbjct 410193 TACCGTCTGTCTTACCGGATATAAACCATAGAAGTTCATGAAGAATACCTTTGAAAAAAA 410252 Query 205934 TTGATTTTGTTGTAAATAATGGAAATGAATCATCT 205968 | || ||||| || ||||||||| | ||||| Sbjct 410253 CTTTCTTGGTTGTTAACAATGGAAATTGACCATCT 410287 >seq40 Length=167105 Score = 147 bits (162), Expect = 3e-30 Identities = 172/230 (75%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| ||| | || ||| | || || || ||||| ||| | || ||||| || | Sbjct 19764 ATGCAAATCTTTGTTAAAACATTGACTGGTAAGACTATCACTTTGGAAGTTGAATCATCT 19823 Query 124599 GATACAATTTCTAAT-TTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 || || ||| ||| ||||| || || || |||||||| || ||||| ||||||||||| Sbjct 19824 GACACCATTGATAACGTTAAATCA-AAGATCCAAGATAAGGAGGGTATTCCACCTGATCA 19882 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 ||| || | ||||| || || || |||||||| ||| || |||| || || || || Sbjct 19883 ACAGAGATTAATTTTCGCTGGTAAGCAATTAGAAGATGGTAGAACYTTGTCTGACTACAA 19942 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTA 124767 || ||||| ||||||||| | || ||||||||| | || ||||||||| Sbjct 19943 CATCCAAAAGGAATCAACTCTTCACTTGGTTTTAAGATTGAGAGGTGGTA 19992 >seq3 Length=1000385 Score = 132 bits (146), Expect = 7e-26 Identities = 169/233 (73%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 124536 ACAATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCA 124595 ||||||||||| ||| | ||||| | || || || || || || | || ||||| | Sbjct 936523 ACAATGCAAATTTTTGTTAAGACCTTGACTGGTAAGACAATTACCTTGGAAGTTGAATCT 936464 Query 124596 AATGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGAT 124655 || || ||| ||| | || || || |||||||| |||||||| ||||||||| Sbjct 936463 TCCGACACCATTGACAATGTCAAGTCCAAGATCCAAGATAAGGAAGGTATCCCACCTGAT 936404 Query 124656 CAACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTAT 124715 |||||||| | || ||||| || || ||||| || || || |||| || || || Sbjct 936403 CAACAAAGATTGATCTTTGCCGGTAAGCAATTGGAAGACGGTAGAACCTTGTCCGACTAC 936344 Query 124716 AATATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 || |||||||| ||||| |||||||| |||||||| | || |||||||||| Sbjct 936343 AACATTCAAAAGGAATCCACTTTGCACTTGGTTTTGAGATTGAGAGGTGGTAT 936291 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 755454885702400