Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ambrosiozyma_20monospora_20[genbank_20GCA_5F001599995.1_202016-03-
01] 118 sequences; 24,978,438 total letters
Query= NC_002520.1
Length=232392
Score E
Sequences producing significant alignments: (Bits) Value
seq40 104 3e-17
seq17 102 1e-16
seq3 98.7 1e-15
>seq40
Length=167105
Score = 104 bits (114), Expect = 3e-17
Identities = 106/138 (77%), Gaps = 2/138 (1%)
Strand=Plus/Minus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTC-TTTAGATATATTATAATCTGA 146109
|||||||| | ||| || ||||| || | || ||||| ||| | || || || || ||
Sbjct 19762 CCACCTCTCAATCTCAACACCAAGTGAAGWGTTGATTCCTTTTGR-ATGTTGTAGTCAGA 19704
Query 146110 AAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGG 146169
| ||||| | ||| |||||||| || ||||| |||||||||||||| || || || ||
Sbjct 19703 CAARGTTCTACCATCTTCTAATTGCTTACCAGCGAAAATCAATCTTTGTTGGTCAGGTGG 19644
Query 146170 AATTCCTTCTTTATCTTG 146187
||| ||||| ||||||||
Sbjct 19643 AATACCTTCCTTATCTTG 19626
>seq17
Length=626534
Score = 102 bits (112), Expect = 1e-16
Identities = 107/138 (78%), Gaps = 2/138 (1%)
Strand=Plus/Plus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTC-TTTAGATATATTATAATCTGA 146109
|||||||| | ||| || ||||| || | ||| ||||| ||| || || || || || ||
Sbjct 620750 CCACCTCTCAATCTCAAAACCAAGTGAAGAGTGGATTCCTTTTGA-ATGTTGTAGTCAGA 620808
Query 146110 AAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGG 146169
| |||||| | ||| || ||||| || |||||||||||||||||||| || || || ||
Sbjct 620809 CAAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAAATCAATCTTTGTTGGTCAGGTGG 620868
Query 146170 AATTCCTTCTTTATCTTG 146187
|| ||||| || |||||
Sbjct 620869 GATACCTTCCTTGTCTTG 620886
>seq3
Length=1000385
Score = 98.7 bits (108), Expect = 1e-15
Identities = 106/138 (77%), Gaps = 2/138 (1%)
Strand=Plus/Plus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTC-TTTAGATATATTATAATCTGA 146109
|||||||| | ||| || ||||| || ||||| ||||| ||| || || || || || ||
Sbjct 936294 CCACCTCTCAATCTCAAAACCAAGTGCAAAGTGGATTCCTTTTGA-ATGTTGTAGTCGGA 936352
Query 146110 AAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGG 146169
| ||||| | || || ||||| || || ||||| ||||||||||| ||||| || ||
Sbjct 936353 CAAGGTTCTACCGTCTTCCAATTGCTTACCGGCAAAGATCAATCTTTGTTGATCAGGTGG 936412
Query 146170 AATTCCTTCTTTATCTTG 146187
|| ||||| ||||||||
Sbjct 936413 GATACCTTCCTTATCTTG 936430
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 743525303298560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |