Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ambrosiozyma_20monospora_20[genbank_20GCA_5F001599995.1_202016-03- 01] 118 sequences; 24,978,438 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq12 273 2e-68 >seq12 Length=722896 Score = 273 bits (302), Expect = 2e-68 Identities = 650/967 (67%), Gaps = 29/967 (3%) Strand=Plus/Minus Query 13846 CAATAAA-AACTAAAAATCAACATCTAACGAAAAAACATT---------ATCGTCTTTGT 13895 |||||| || || |||||| |||| || || ||| | || ||| || || | Sbjct 314521 CAATAATCAATTAGAAATCATCATCGAAAGAGAAACCGTTTTCAACAGGATCCTCCTTCT 314462 Query 13896 TAGAAATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTAC 13955 ||| ||||| || |||||||| ||| |||||| || || ||||||||||| |||| Sbjct 314461 TAGCCATAACACCAGCCTTTTGATAGTCAGAAACTCTCTTCTCGAAGAAGTTAGTCTTAC 314402 Query 13956 CTTCCAGTGATATATTTTCCATAAAATCAAATGGATTTGTTGACATAA-ACACTTTATCA 14014 | ||| || ||||||||||| || || ||||| ||||| ||| | | | || | Sbjct 314401 CAGCCAAGGAAATATTTTCCATGAAGTCGAATGGGTTTGT-GACGTTGTAGATCTTCTTG 314343 Query 14015 CAACCTAGTTCTAATAGTAATCTATCCGCAATGAACTCAATATATTGAGACATTAAATCA 14074 || || | | | | ||||| || |||| || |||| |||||| |||| || ||| Sbjct 314342 CATCCCAAAGCAACCAACAATCTGTCAGCAACAAATTCAACGTATTGACACATCAAGTCA 314283 Query 14075 CAATTCATACCTATTAGTTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGAC 14134 || |||||||| | | || || || | || || || || ||||| || Sbjct 314282 CAGTTCATACCCAACAACTTGACTGGCAAAGCATCAGTGAAGTATCTCTTTTCAATGTCA 314223 Query 14135 ACAGCCTCGTTTATAATAATCGTAATAATTTCATTAGAAGGAGGATATTTTAGATGTTTA 14194 || || || | ||||| | | || |||||| | | || | | || | || Sbjct 314222 ACGGCTTCAGTGATAATCTTGGCAACAATTTCTTCATCTGGGGTGTTGTTCAAGTGAGAG 314163 Query 14195 AAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAA 14254 || | ||||| || |||||| ||| || || |||||||||| || | |||||| || Sbjct 314162 AATAACAAACAAGCGAAATCAGTATGCAGACCTTCATCTCTACAGATCAATTCGTTAGAG 314103 Query 14255 AATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCG 14314 || || || ||||||||||| |||| || || ||||| || || ||||| || || || Sbjct 314102 AAAGTCAAACCTGGCATCAAACCTCTCTTCTTCAACCAGAAGATGGCAGCAAAAGAACCA 314043 Query 14315 GAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTT 14374 || ||||| || |||||||| |||||||| || | |||| ||| |||||| | || ||| Sbjct 314042 GAGAAGAAAATACCCTCAACAGCAGCAAAGGCAACCAATCTTTCACCAAACAAAGCATTT 313983 Query 14375 TTGTTCGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTT-TC 14433 | | || |||||| | |||||| || | ||||| | | ||| | | | ||| || Sbjct 313982 TCATCAGAAATCCATCTCAAAGCCCAGTCCGCTTTTTCTCTGATACA-TGGAACGTTATC 313924 Query 14434 AATAGCATTAAATAAATGTTC--CTTCTCTTTAG-TACTTGAAATGTATGTATCAATAAG 14490 ||||||||| ||||| || |||| |||| | | ||||| | || || ||||| | Sbjct 313923 AATAGCATTGAATAAGAAATCAGCTTC-CTTTGGATCCTTGACA--TAAGTGTCAATCAA 313867 Query 14491 TAAGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACATCT 14550 || || |||||||||| ||||||||||| || || ||||| || ||||| | Sbjct 313866 TAGAGAGTAAGTTTCAGAGTGGATGTTTTCCATCATGATTTGGAAACCGTAGAAACACTT 313807 Query 14551 AGCTTCTGACCATTGTACCTCTGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACC 14610 |||||| | ||| || || | | || |||| |||| |||||||| || ||||| Sbjct 313806 AGCTTCAGGAACTTGAACTTCAGCAGAGAAGTTTTCAACCAAGTTTTCATTGACAATACC 313747 Query 14611 ATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATT-GC--T 14667 ||| ||| ||||| || ||||| | | || || ||| || |||||| || | Sbjct 313746 ATCGGAAGCAGCAAAGAAAGCCAAAACTCTAGACATGAAATAT--CT-TTCATTAGCATT 313690 Query 14668 GA---GTTTTTTCCAATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAA 14724 | || ||||| || | ||||||||||| | ||| | || ||| | ||||| || Sbjct 313689 CAACTTGTTGTTCCAGTCATCCAAATCCTTAGACAAATCAATCTCTTCAGCAGTCCAGAA 313630 Query 14725 ACTAGCAACAGCTTTTTTATACATTACCCATATTTCTTTATATAATATAGGAAAAACTAC 14784 | ||| | || || |||||| ||| ||||| | || || || || | || Sbjct 313629 AGAAGCTTCTTGCTTCTTGTACATTTGCCAGATTTCATGGTACTTGATTGGGAACAAAAC 313570 Query 14785 AAATCTT 14791 ||||||| Sbjct 313569 AAATCTT 313563 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482344888540240