Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ambrosiozyma_20monospora_20[genbank_20GCA_5F001599995.1_202016-03- 01] 118 sequences; 24,978,438 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq23 152 5e-32 seq17 102 7e-17 seq3 89.7 5e-13 >seq23 Length=373761 Score = 152 bits (168), Expect = 5e-32 Identities = 408/622 (66%), Gaps = 4/622 (1%) Strand=Plus/Minus Query 23341 TTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCG 23400 |||||| | |||| || | ||| || ||||| | ||| ||||| || | ||| | Sbjct 128662 TTCAACTCTCTTCATGAACAAATCTGGAATCCACAAAGCTGGGAACAAATCTCTGGCTCT 128603 Query 23401 CACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCA 23460 | || ||||| ||| |||||| | | ||| | |||||| || | ||| || ||||| Sbjct 128602 GATTTCTTCTTTACCGTGATTCTTTCTGATATCAATAAAGTCAAAGATGTCAGCGTGCCA 128543 Query 23461 CGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACG 23520 || || | |||| |||||| || || |||||||| || || || ||||| || || | Sbjct 128542 TGGTTCAATATAAAGGGCAAAAGCACCAGGTCTCTTGTTACCACCTTGATCAACATATCT 128483 Query 23521 GGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCC 23580 || || |||||| | ||||| | ||| || | || ||| || || | ||| || Sbjct 128482 AGCAGTATTGTTGAAAACTCTAACCATAGGAATGATACCATTTGAAGTACCGTTGGTACC 128423 Query 23581 CGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGA 23640 || | ||||| | |||| || |||||||| ||| | ||| || || || | | Sbjct 128422 GGCGATGTAAGAACCAGTGGCTCTAATGTTGTGAATGTGTAGACCAATACCACCTGCAGT 128363 Query 23641 TTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTT 23700 || || |||| || || | |||| || || || || || || || || || || Sbjct 128362 CTTAGAAATCAGAGCACACTCCTTCAATGTATCATAAATACCTTCAATAGAATCTTCCTT 128303 Query 23701 GGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGT 23760 | || ||||||||||| || |||||||| | || ||| | || |||| || Sbjct 128302 CATGGCAACCAAGAAACAAGAGGACATTTGTGGGCGAGGAGTACCAGCGTTAAACAAAGT 128243 Query 23761 CGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATC 23820 || || || || || |||| | ||||| | ||||| || || | | | Sbjct 128242 TGGAGAAGCATGGGTGAAATATCTTTGGGACATCAAGTTGTAAGTCTCTAAAACTTTAGG 128183 Query 23821 AATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTC--G 23878 ||||| || ||||| ||||| ||||| || | ||| |||| | ||| ||||| || Sbjct 128182 AATGTTATCACCGTGAATACCAATGGCAACTCTCATGATCAAATGTTGTGGTCTTTCAGC 128123 Query 23879 ACCGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAG 23938 | | | | || | |||| | || ||||| || | || || || || || || |||||| Sbjct 128122 AACCTTA--CCATCAATTCTCAAAAGATAGGATCTTTCCAAAGTCTTGAAACCGAAATAG 128065 Query 23939 TCATAGTTAAAGTCACGATCGT 23960 | || | || ||||| |||| Sbjct 128064 TTGTATTGGAAATCACGGTCGT 128043 Score = 122 bits (134), Expect = 8e-23 Identities = 451/695 (65%), Gaps = 15/695 (2%) Strand=Plus/Minus Query 22106 TTGTCCACTGTAAACTGTATGGCGTTTGCGGCCGGTTTGGTGCGAAGATAATACATGCCC 22165 || || |||||||| || ||||| ||||| | || || | ||||||||||| || Sbjct 129903 TTATCAACTGTAAATTGAATGGCAGCAGCGGCAGCTTGAGTTCTTAGATAATACATACCA 129844 Query 22166 GTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTTCCATAACTCGGC 22225 ||||||| |||| ||||||| |||| ||||| || || ||||| || || | || Sbjct 129843 GTCTTCAAACCCTTCTTCCAACCGTAGAAATGCATGGAAGTCAACTTACCCATGGTTGGG 129784 Query 22226 AAGTCCATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCGGCGGCC 22285 | || || | || || || || ||||||| | || |||| || || | | Sbjct 129783 TTCTTCAAGTGAATGTTCAAAGATTGGGATTGATCGACGTAAGCACCTCTGTCAGCAGAC 129724 Query 22286 ATATTTATCAATGTACGCATC-GACATTTCCCATACGGTCTTGTACAGTTGCCTGATCTC 22344 |||| || ||| | | || |||||||| || |||||||| | | | | || Sbjct 129723 ATATCAAT-AATAGCCTTTTGAGAAATTTCCCACACAGTCTTGTAAATCTTTTTCAATTC 129665 Query 22345 TAACGGTATCGATTCG--ATCCTCTGGACGGACCCGTTATTGTGTATGATCAAATTTTTA 22402 | | | | | ||| | | | || | ||| ||||||| || || || || || Sbjct 129664 -ATCAGGAAC-ATTAGGCAAGTTTTGAATGGAACCGTTATCAGAAATAATGAAGTTCTTC 129607 Query 22403 ATCGTATCGTTCCACAAACCGATGGCGGTCAAATCTTTGACCAGATGACGGTTCACCACT 22462 || |||| | ||| | ||| | | |||||| || | || | |||| || | | Sbjct 129606 ATGTTATCATCCCAAAGACCCAAGTTAACCAAATCCTTCAACAAGTATGGGTTGACAATT 129547 Query 22463 TGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGAAAGAT 22522 || || || || | |||||| | | |||||||||||| ||| | || |||||| || Sbjct 129546 TGGAATTCACCAGCCAAGACTCTTCTAGAGTAAATGTTGGAGGTGTATGGCTCGAAACAT 129487 Query 22523 TCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGTAGCGAG 22582 ||||||| |||| || |||| || ||||| || ||||| || || |||| | ||| Sbjct 129486 TCATTGTAACCCAAGATTTGAGAAGTGGAAGCAGTTGGCATTGGAGCTAACAACAATGAG 129427 Query 22583 TTTCTCAAGCCGTGCTTTGAAA--TTTTACTCTTGAGCATCGACCAGTCCCACAGATCGG 22640 ||||| || |||||||| || | || || || ||| ||| ||||| | ||| | Sbjct 129426 TTTCTTAAACCGTGCTTGACAATGTCTTCCTTCAAAGAATC--CCACTCCCATAAATCAG 129369 Query 22641 ACGGCGTCACATTGTCCCACATATCGTATTGCAACACGCCGCGACTCGCCGGGCTGCCTT 22700 ||| || || |||| | ||| ||||||| | || || || || ||| | Sbjct 129368 TTGGCTTC---TTACCCCATAAATCAAATTGCAATAATCCTTGAGAAGCTGGAGAGCCCT 129312 Query 22701 CGTACGTTTCGTACGGACCATATATCGCGGCAAGTTC-GCAGCTCGCCTCCAACGCGCCG 22759 | ||||| || | ||| | | | ||| | ||| ||| || ||||| || || Sbjct 129311 TAAAAGTTTCATATGCACCTTCTTCCTTGGCCAATTCAACAG-AAGCTTCCAAACCGGCG 129253 Query 22760 TAATATATAGTCTCGAAGATTTTCTTGTTCAATTC 22794 | ||| | ||| |||||||||| ||||||| || Sbjct 129252 TGATACAAAGTTTCGAAGATTTGAATGTTCAACTC 129218 >seq17 Length=626534 Score = 102 bits (112), Expect = 7e-17 Identities = 161/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249 || ||||||||||| || ||||| || ||||| || || ||||| | || || ||| | Sbjct 620979 AAGATGCAAATTTTTGTTAAGACCCTTACAGGTAAGACCATCACTTTGGAGGTCGAATCC 620920 Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309 || |||| | || | ||||| | || ||||||||||| | || || ||| Sbjct 620919 TCTGACACCATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATCCCACCTGAC 620860 Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369 || || | | || || ||||| || || |||||||| || ||| || || || Sbjct 620859 CAACAAAGATTGATTTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCTGACTAC 620800 Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT 31420 ||||||||||| ||||| |||||||| |||| | ||| |||| || ||| Sbjct 620799 AACATTCAAAAGGAATCCACTCTTCACTTGGTTTTGAGATTGAGAGGTGGT 620749 >seq3 Length=1000385 Score = 89.7 bits (98), Expect = 5e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||||||||| || ||||| |||| || || || || ||| | || |||||| | ||| Sbjct 936520 ATGCAAATTTTTGTTAAGACCTTGACTGGTAAGACAATTACCTTGGAAGTTGAATCTTCC 936461 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | ||||| | || || |||||||| | || || || || Sbjct 936460 GACACCATTGACAATGTCAAGTCCAAGATCCAAGATAAGGAAGGTATCCCACCTGATCAA 936401 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || | | || || || || || || ||||||||| || || || ||| || ||| Sbjct 936400 CAAAGATTGATCTTTGCCGGTAAGCAATTGGAAGACGGTAGAACCTTGTCCGACTACAAC 936341 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 |||||||| ||||| ||| | || |||| | ||| |||| || |||| Sbjct 936340 ATTCAAAAGGAATCCACTTTGCACTTGGTTTTGAGATTGAGAGGTGGTA 936292 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445765742494560