Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ambrosiozyma_20monospora_20[genbank_20GCA_5F001599995.1_202016-03-
01] 118 sequences; 24,978,438 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq23 152 5e-32
seq17 102 7e-17
seq3 89.7 5e-13
>seq23
Length=373761
Score = 152 bits (168), Expect = 5e-32
Identities = 408/622 (66%), Gaps = 4/622 (1%)
Strand=Plus/Minus
Query 23341 TTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCG 23400
|||||| | |||| || | ||| || ||||| | ||| ||||| || | ||| |
Sbjct 128662 TTCAACTCTCTTCATGAACAAATCTGGAATCCACAAAGCTGGGAACAAATCTCTGGCTCT 128603
Query 23401 CACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCA 23460
| || ||||| ||| |||||| | | ||| | |||||| || | ||| || |||||
Sbjct 128602 GATTTCTTCTTTACCGTGATTCTTTCTGATATCAATAAAGTCAAAGATGTCAGCGTGCCA 128543
Query 23461 CGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACG 23520
|| || | |||| |||||| || || |||||||| || || || ||||| || || |
Sbjct 128542 TGGTTCAATATAAAGGGCAAAAGCACCAGGTCTCTTGTTACCACCTTGATCAACATATCT 128483
Query 23521 GGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCC 23580
|| || |||||| | ||||| | ||| || | || ||| || || | ||| ||
Sbjct 128482 AGCAGTATTGTTGAAAACTCTAACCATAGGAATGATACCATTTGAAGTACCGTTGGTACC 128423
Query 23581 CGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGA 23640
|| | ||||| | |||| || |||||||| ||| | ||| || || || | |
Sbjct 128422 GGCGATGTAAGAACCAGTGGCTCTAATGTTGTGAATGTGTAGACCAATACCACCTGCAGT 128363
Query 23641 TTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTT 23700
|| || |||| || || | |||| || || || || || || || || || ||
Sbjct 128362 CTTAGAAATCAGAGCACACTCCTTCAATGTATCATAAATACCTTCAATAGAATCTTCCTT 128303
Query 23701 GGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGT 23760
| || ||||||||||| || |||||||| | || ||| | || |||| ||
Sbjct 128302 CATGGCAACCAAGAAACAAGAGGACATTTGTGGGCGAGGAGTACCAGCGTTAAACAAAGT 128243
Query 23761 CGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATC 23820
|| || || || || |||| | ||||| | ||||| || || | | |
Sbjct 128242 TGGAGAAGCATGGGTGAAATATCTTTGGGACATCAAGTTGTAAGTCTCTAAAACTTTAGG 128183
Query 23821 AATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTC--G 23878
||||| || ||||| ||||| ||||| || | ||| |||| | ||| ||||| ||
Sbjct 128182 AATGTTATCACCGTGAATACCAATGGCAACTCTCATGATCAAATGTTGTGGTCTTTCAGC 128123
Query 23879 ACCGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAG 23938
| | | | || | |||| | || ||||| || | || || || || || || ||||||
Sbjct 128122 AACCTTA--CCATCAATTCTCAAAAGATAGGATCTTTCCAAAGTCTTGAAACCGAAATAG 128065
Query 23939 TCATAGTTAAAGTCACGATCGT 23960
| || | || ||||| ||||
Sbjct 128064 TTGTATTGGAAATCACGGTCGT 128043
Score = 122 bits (134), Expect = 8e-23
Identities = 451/695 (65%), Gaps = 15/695 (2%)
Strand=Plus/Minus
Query 22106 TTGTCCACTGTAAACTGTATGGCGTTTGCGGCCGGTTTGGTGCGAAGATAATACATGCCC 22165
|| || |||||||| || ||||| ||||| | || || | ||||||||||| ||
Sbjct 129903 TTATCAACTGTAAATTGAATGGCAGCAGCGGCAGCTTGAGTTCTTAGATAATACATACCA 129844
Query 22166 GTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTTCCATAACTCGGC 22225
||||||| |||| ||||||| |||| ||||| || || ||||| || || | ||
Sbjct 129843 GTCTTCAAACCCTTCTTCCAACCGTAGAAATGCATGGAAGTCAACTTACCCATGGTTGGG 129784
Query 22226 AAGTCCATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCGGCGGCC 22285
| || || | || || || || ||||||| | || |||| || || | |
Sbjct 129783 TTCTTCAAGTGAATGTTCAAAGATTGGGATTGATCGACGTAAGCACCTCTGTCAGCAGAC 129724
Query 22286 ATATTTATCAATGTACGCATC-GACATTTCCCATACGGTCTTGTACAGTTGCCTGATCTC 22344
|||| || ||| | | || |||||||| || |||||||| | | | | ||
Sbjct 129723 ATATCAAT-AATAGCCTTTTGAGAAATTTCCCACACAGTCTTGTAAATCTTTTTCAATTC 129665
Query 22345 TAACGGTATCGATTCG--ATCCTCTGGACGGACCCGTTATTGTGTATGATCAAATTTTTA 22402
| | | | | ||| | | | || | ||| ||||||| || || || || ||
Sbjct 129664 -ATCAGGAAC-ATTAGGCAAGTTTTGAATGGAACCGTTATCAGAAATAATGAAGTTCTTC 129607
Query 22403 ATCGTATCGTTCCACAAACCGATGGCGGTCAAATCTTTGACCAGATGACGGTTCACCACT 22462
|| |||| | ||| | ||| | | |||||| || | || | |||| || | |
Sbjct 129606 ATGTTATCATCCCAAAGACCCAAGTTAACCAAATCCTTCAACAAGTATGGGTTGACAATT 129547
Query 22463 TGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGAAAGAT 22522
|| || || || | |||||| | | |||||||||||| ||| | || |||||| ||
Sbjct 129546 TGGAATTCACCAGCCAAGACTCTTCTAGAGTAAATGTTGGAGGTGTATGGCTCGAAACAT 129487
Query 22523 TCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGTAGCGAG 22582
||||||| |||| || |||| || ||||| || ||||| || || |||| | |||
Sbjct 129486 TCATTGTAACCCAAGATTTGAGAAGTGGAAGCAGTTGGCATTGGAGCTAACAACAATGAG 129427
Query 22583 TTTCTCAAGCCGTGCTTTGAAA--TTTTACTCTTGAGCATCGACCAGTCCCACAGATCGG 22640
||||| || |||||||| || | || || || ||| ||| ||||| | ||| |
Sbjct 129426 TTTCTTAAACCGTGCTTGACAATGTCTTCCTTCAAAGAATC--CCACTCCCATAAATCAG 129369
Query 22641 ACGGCGTCACATTGTCCCACATATCGTATTGCAACACGCCGCGACTCGCCGGGCTGCCTT 22700
||| || || |||| | ||| ||||||| | || || || || ||| |
Sbjct 129368 TTGGCTTC---TTACCCCATAAATCAAATTGCAATAATCCTTGAGAAGCTGGAGAGCCCT 129312
Query 22701 CGTACGTTTCGTACGGACCATATATCGCGGCAAGTTC-GCAGCTCGCCTCCAACGCGCCG 22759
| ||||| || | ||| | | | ||| | ||| ||| || ||||| || ||
Sbjct 129311 TAAAAGTTTCATATGCACCTTCTTCCTTGGCCAATTCAACAG-AAGCTTCCAAACCGGCG 129253
Query 22760 TAATATATAGTCTCGAAGATTTTCTTGTTCAATTC 22794
| ||| | ||| |||||||||| ||||||| ||
Sbjct 129252 TGATACAAAGTTTCGAAGATTTGAATGTTCAACTC 129218
>seq17
Length=626534
Score = 102 bits (112), Expect = 7e-17
Identities = 161/231 (70%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249
|| ||||||||||| || ||||| || ||||| || || ||||| | || || ||| |
Sbjct 620979 AAGATGCAAATTTTTGTTAAGACCCTTACAGGTAAGACCATCACTTTGGAGGTCGAATCC 620920
Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309
|| |||| | || | ||||| | || ||||||||||| | || || |||
Sbjct 620919 TCTGACACCATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATCCCACCTGAC 620860
Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369
|| || | | || || ||||| || || |||||||| || ||| || || ||
Sbjct 620859 CAACAAAGATTGATTTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCTGACTAC 620800
Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT 31420
||||||||||| ||||| |||||||| |||| | ||| |||| || |||
Sbjct 620799 AACATTCAAAAGGAATCCACTCTTCACTTGGTTTTGAGATTGAGAGGTGGT 620749
>seq3
Length=1000385
Score = 89.7 bits (98), Expect = 5e-13
Identities = 157/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||||||||| || ||||| |||| || || || || ||| | || |||||| | |||
Sbjct 936520 ATGCAAATTTTTGTTAAGACCTTGACTGGTAAGACAATTACCTTGGAAGTTGAATCTTCC 936461
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| | || | ||||| | || || |||||||| | || || || ||
Sbjct 936460 GACACCATTGACAATGTCAAGTCCAAGATCCAAGATAAGGAAGGTATCCCACCTGATCAA 936401
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
|| | | || || || || || || ||||||||| || || || ||| || |||
Sbjct 936400 CAAAGATTGATCTTTGCCGGTAAGCAATTGGAAGACGGTAGAACCTTGTCCGACTACAAC 936341
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
|||||||| ||||| ||| | || |||| | ||| |||| || ||||
Sbjct 936340 ATTCAAAAGGAATCCACTTTGCACTTGGTTTTGAGATTGAGAGGTGGTA 936292
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445765742494560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |