Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ambrosiozyma_20monospora_20[genbank_20GCA_5F001599995.1_202016-03- 01] 118 sequences; 24,978,438 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq23 315 9e-81 seq12 286 4e-72 >seq23 Length=373761 Score = 315 bits (348), Expect = 9e-81 Identities = 1359/2140 (64%), Gaps = 37/2140 (2%) Strand=Plus/Minus Query 62033 ATCCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACAT 62092 ||| || || | ||| |||||||||| ||| | || | || || | |||||| ||||| Sbjct 129907 ATCTTTATCAACTGTAAATTGAATGGCAGCAGCGGCAGCTTGAGTTCTTAGATAATACAT 129848 Query 62093 TCCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGA-ATAAC 62151 || || || | ||| |||| ||||| |||||||| || | || || Sbjct 129847 ACCAGTCTTCAAACCCTTCTTCCAACCGTAGAAATGCATGGAAGTCAACTTACCCATGGT 129788 Query 62152 TCGGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTG 62211 | || ||| | | || || |||| |||||| |||||||| | | || || ||||| | Sbjct 129787 TGGGTTCTTCAAG-TGAATGTTCAAAGATTGGGATTGATCGACGTAAGCACCTCTGTCAG 129729 Query 62212 CAGCCATTTTTATGATCGTCTTTTGTGCAATTTCCCAAATAGTTTTATAAA-CTCGCTTA 62270 ||| ||| | || || | |||||| | ||||||||| | ||| || |||| || | | Sbjct 129728 CAGACATATCAATAATAGCCTTTTGAGAAATTTCCCACACAGTCTTGTAAATCTTTTTCA 129669 Query 62271 ATATCTTCTGGAAGGTTTGTA---TTCTGAATGGATCCACCATCTACCATAATCCTATTC 62327 || || || |||| || | || |||||||| || ||| ||||| ||| Sbjct 129668 AT-TCATCAGGAACATTAGGCAAGTTTTGAATGGAACCGTTATCAGAAATAATGAAGTTC 129610 Query 62328 TTGATCTCATCATTCCATAATTTTCTCTCGGTTAA--AACTC--TAAGGAGATGCGGGTT 62383 || || | ||||| ||| | | ||||| || || | | | | ||||| Sbjct 129609 TTCATGTTATCATCCCAAAGAC----CCAAGTTAACCAAATCCTTCAACAAGTATGGGTT 129554 Query 62384 AACTACTTGGAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTC 62443 || | ||||||||| |||| ||| ||||| | || |||||| || ||| || || || Sbjct 129553 GACAATTTGGAATTCACCAGCCAAGACTCTTCTAGAGTAAATGTTGGAGGTGTATGGCTC 129494 Query 62444 CACCGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAA 62503 | | ||||| | ||||| ||||||| ||| || ||||| ||||| || || | ||| Sbjct 129493 GAAACATTCATTGTAACCCAAGATTTGAGAAGTGGAAGCAGTTGGCATTGGAGCTAACAA 129434 Query 62504 TAAACTATTTCTAAGACCGTATGTTCTGATTTTATCTTTTAGATGTTCCCAATTCCAAAG 62563 || ||||| | ||||| | || | || || | | ||||| | ||| | Sbjct 129433 CAATGAGTTTCTTAAACCGTGCTTGACAATGTCTTCCTTCAAAGAATCCCACTCCCATAA 129374 Query 62564 ATCCGACGGTACAACANNNNNNNNNNNATATTGTAGAATACCGTTACTGGCGTACGATCC 62623 ||| | || | | |||| | | || | | || || || Sbjct 129373 ATCAGTTGGCTTCTTACCCCATAAATCAAATTGCAATAATCCTTGAGAAGCTGGAGAGCC 129314 Query 62624 TACATATGTATCATATGGTCCTTCCTTCTCAGCTAGTTTACAACTCGCCTCTAATGCACC 62683 | | || ||||||| ||||| | || || | || | | || || || | | Sbjct 129313 CTTAAAAGTTTCATATGCACCTTCTTCCTTGGCCAATTCAACAGAAGCTTCCAAACCGGC 129254 Query 62684 GTAATAAATGGTTTCAAAGATCTTCTTATTTAGATCTTGTGCTTCCGGGCTATCAAATGG 62743 || ||| | ||||| ||||| | | || | |||| ||||| ||| ||||||||| Sbjct 129253 GTGATACAAAGTTTCGAAGATTTGAATGTTCAACTCTTTAGCTTCAGGGGAATCAAATGG 129194 Query 62744 ATAATTTAAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATG 62803 | | || | || || | || ||||| ||||||||||| | | | || ||||| | Sbjct 129193 AATTCTCAATTGCATGAAAGTATCGGCTAAACCTTGAACACCTAAAGCAATTGGTCTGTT 129134 Query 62804 TCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATT 62863 |||| | || || || ||| | || || || || || | || ||||| || || Sbjct 129133 TCTCATGTTGGATCTTCTAGCAGTTTCAACTGGGTAGTAGTTTCTGTCAATAATCTTGTT 129074 Query 62864 GAGATTTCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATCGCC---- 62919 | || || | || ||| | | || | || ||| || ||| | | | Sbjct 129073 CAAGTTCTTGGTGACCACCTTGGCAATCTCATGCAATTTCTTGAAGTCATACCAGCAAGT 129014 Query 62920 -----CATCTA---TTACAAACATGTTCAATGCAACAGATGCCAGATTACACACGGCTAC 62971 |||| | | ||||| ||| |||||||| |||| ||||| || || Sbjct 129013 AGTGTCATCAAAAGTAACAAAGGCTGGCAAAGCAACAGAAGCCAAGTTACAAACAGCAGT 128954 Query 62972 CTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCC 63031 ||| | | || | ||||| | || ||| || | || |||||||| || Sbjct 128953 TTCAGTTGGGTCGGAATATTCAACAATTTCACAACACAAGTTGGATGACTTGATAACACC 128894 Query 63032 TAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACC 63091 || || | ||| ||| |||||||||||| ||||| || || | ||||| |||||||| Sbjct 128893 CAAGTTCTTTTGGTTAGACTTTTTGTTACAAGCATCTTTGTACAACATGAAAGGAGTACC 128834 Query 63092 AGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTT 63151 ||||||| | |||| ||| | || | | ||| | | ||||||| | | | | | Sbjct 128833 AGTTTCAGTTTGAGCTTCCAAGATGGAGTACCACAACTTTTGAGCCTTAACAGTGGTTCT 128774 Query 63152 GTATCTCCTTTCTCTTTCGTATAGAGTATACAATCGTTCGAACTCGTCTCCCCAAACATT 63211 ||| | ||| |||| || || ||||| || ||||| || || |||| | Sbjct 128773 ACCTCTACCTTCAGTTTCATACTTGGTGTACAACTTCTCAAACTCATCACCATAAACCTC 128714 Query 63212 GTCCAATCTAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCG 63271 || | ||| ||| || | | ||| | ||| || | | | |||| Sbjct 128713 AGATAAACCTGGAGCATCAGAAGGTGAGAACAAAGTCCATTCAGAATTAGATTCAACTCT 128654 Query 63272 TTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTTGTTCTATGTTCCTC 63331 ||||| || | ||| |||||||| | |||| || | |||||| | ||| ||| || Sbjct 128653 CTTCATGAACAAATCTGGAATCCACAAAGCTGGGAACAAATCTCTGGCTCTGATTTCTTC 128594 Query 63332 GTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAA 63391 || || ||||||| | | ||| | || | | || |||| ||||| ||||| | Sbjct 128593 TTTACCGTGATTCTTTCTGATATCAATAAAGTCAAAGATGTCAGCGTGCCATGGTTCAAT 128534 Query 63392 GTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTT 63451 || | ||| | | | ||||| | ||||| || || ||||| | |||||||| || || Sbjct 128533 ATAAAGGGCAAAAGCACCAGGTCTCTTGTTACCACCTTGATCAACATATCTAGCAGTATT 128474 Query 63452 ATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATA 63511 || ||||||| | ||| ||||| ||||| ||||| |||| |||||||||| ||| || Sbjct 128473 GTTGAAAACTCTAACCATAGGAATGATACCATTTGAAGTACCGTTGGTACCGGCGATGTA 128414 Query 63512 GCCTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGAT 63571 ||| |||| | ||| || ||| |||||| || || ||||| | ||||| || Sbjct 128413 AGAACCAGTGGCTCTAATGTTGTGAATGTGTAGACCAATACCACCTGCAGTCTTAGAAAT 128354 Query 63572 TAATGCGCATCGTTTTAACGTGTCATAGATGCCTTCTATGCTATCATCGATCATGTTAAG 63631 | || || || || || ||||| || ||||| || ||| || ||||| || Sbjct 128353 CAGAGCACACTCCTTCAATGTATCATAAATACCTTCAATAGAATCTTCCTTCATGGCAAC 128294 Query 63632 TAGAAAACAGCTAGACATTTGGTGACGAGTAGTTCCCGCATTAAATAAGGTAGGAGAAGC 63691 | ||||| |||||||| | |||| ||| || || ||||| || || |||||||| Sbjct 128293 CAAGAAACAAGAGGACATTTGTGGGCGAGGAGTACCAGCGTTAAACAAAGTTGGAGAAGC 128234 Query 63692 GTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCT----GAGTCTATAT 63747 || || || || ||| || | | ||||| ||||| | | || || | | ||| Sbjct 128233 ATGGGTGAAATATCTTTGGGACATCAAGTTGTAAGTCTCTAAAACTTTAGGAATGT-TAT 128175 Query 63748 CCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACAATTT 63807 | | ||| || || | || || | ||| | || || || ||||||||| ||| | Sbjct 128174 CACCGTGA---ATACCAATGGCAACTCTCATGATCAAATGTTGTGGTCTTTCAGCAACCT 128118 Query 63808 TGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATG 63867 | | ||| |||| | |||||| |||||||||| || ||||| |||||||||||| Sbjct 128117 TACCATCAATTCTCAAAAGATAGGATCTTTCCAAAGTCTTGAAACCGAAATAGTTGTATT 128058 Query 63868 AAAAGTCTCGTTCGTAAATAATAACCGAATTGAGCTTATCCTTATATTTGTTAACTATAT 63927 || || || |||||| | || | || || | || || || || | || || | Sbjct 128057 GGAAATCACGGTCGTAATTGATGGCGGAGTTTAACTCTTCAGCATGCTTTTGCACAATCT 127998 Query 63928 CCATGGTAATACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGA 63987 | || ||||||| || || || | || ||||| ||||| |||||||| ||| Sbjct 127997 CATAAGTTTCTTTTGAAATCATAGGGGATAGCTTACCATTCTTAGGGTTAACATATTTGT 127938 Query 63988 ATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATATGG 64047 |||| | || | || | ||| | || | |||| |||||||| ||| || || | Sbjct 127937 ATAATTGTTCAACGACGGAAGAGAATTGCTTAGTGGTTTGCTTGTGTAAATTGGAGATAG 127878 Query 64048 CTATTCTGGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAGT-GGCTGCTATT 64106 | ||||| || || | | || ||||| || || || || || || || || || Sbjct 127877 CAATTCTAGCAGCCAAGACAGCGTAATCAGGGTGGACAGTGGT-CATGTAAGCAGCGGTT 127819 Query 64107 TCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCAT 64146 || || |||| | |||||||| | ||||| || |||| Sbjct 127818 TCAGCAGCCAAGTTATCCAATTCAATGGTTGTAACACCAT 127779 >seq12 Length=722896 Score = 286 bits (316), Expect = 4e-72 Identities = 616/908 (68%), Gaps = 15/908 (2%) Strand=Plus/Minus Query 33268 CTTCTTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAG 33327 |||||| || |||||| || ||||| || ||| || | || ||||| || |||| Sbjct 314466 CTTCTT-AGCCATAACACCAGCCTTTTGATAGTCAGAAACTCTCTTCTCGAAGAAGTTAG 314408 Query 33328 TTTTTCCTTCCAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTGTAAAttt 33387 | || || |||| || |||||||||||||| || || || || || || ||||| || | Sbjct 314407 TCTTACCAGCCAAGGAAATATTTTCCATGAAGTCGAATGGGTTTGTGACGTTGTAGATCT 314348 Query 33388 ttttAAATCCCAATTCAGAAATCAATCTATCTGCGACGAATTCTATATATGTTTTCATCA 33447 | || ||||||| || | |||||| || || || ||||| | ||| ||||| Sbjct 314347 TCTTGCATCCCAAAGCAACCAACAATCTGTCAGCAACAAATTCAACGTATTGACACATCA 314288 Query 33448 TTTCACAATTCATTCCTATGAGTTTAACTGGAAGAGCCACAGT-AAGAAATTCTTGTTCA 33506 ||||| ||||| || | | || ||||| | ||| |||| ||| | |||| |||| Sbjct 314287 AGTCACAGTTCATACCCAACAACTTGACTGGCAAAGCATCAGTGAAGTATCTCTT-TTCA 314229 Query 33507 ATGGATACCGCATTTGTTATAATAAATCTAACGGTTTCTTCA-CTCGGTGGATGTAATAA 33565 ||| || || | || ||||| ||| |||||||| || || | ||| || Sbjct 314228 ATGTCAACGGCTTCAGTGATAATCTTGGCAACAATTTCTTCATCTGGGGTGTTGTTC-AA 314170 Query 33566 ATGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTC 33625 || || | |||||| |||||||| |||||||| || ||||||| || ||||| Sbjct 314169 GTGAGAGAATAACAAACAAGCGAAATCAGTATGCAGACCTTCATCTCTACAGATCAATTC 314110 Query 33626 GTTAGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAA 33685 |||||| || || | || ||||| | || | ||| || | ||| || |||| ||| || Sbjct 314109 GTTAGAGAAAGTCAAACCTGGCATCAAACCTCTCTTCTTCAACCAGAAGATGGCAGCAAA 314050 Query 33686 TGATCCGGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACC 33745 || || || ||||| || || || || ||||||||||||| | ||| || ||| | Sbjct 314049 AGAACCAGAGAAGAAAATACCCTCAACAGCAGCAAAGGCAACCAATCTTTCACCAAACAA 313990 Query 33746 GGCGCTGTCAT---GTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCAT 33802 || | |||| ||||| | |||||| || || || | | | | ||| || | Sbjct 313989 AGCATTTTCATCAGAAATCCATCTCAAAGCCCAGTCCGCTTTTTCTCTGATACATGG-AA 313931 Query 33803 CGTT-TCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGA 33861 |||| || || ||||| || | | | ||| || ||| || |||||||| || | Sbjct 313930 CGTTATCAATAGCATTGAATAAGAAATCAGCTTCCTTTGGATCCTTGACATAAGTGTCAA 313871 Query 33862 TCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAAC 33921 |||| ||| || |||| || || |||||||| || || || || |||||||||| Sbjct 313870 TCAATAGAGAGTAAGTTTCAGAGTGGATGTTTTCCATCATGATTTGGAAACCGTAGAAAC 313811 Query 33922 ATCTAGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTA 33981 | |||| || | || || ||||| | | | || ||| | || |||||||| || | Sbjct 313810 ACTTAGCTTCAGGAACTTGAACTTCAGCAGAGAAGTTTTCAACCAAGTTTTCATTGACAA 313751 Query 33982 TTCCATCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTG 34041 | ||||| || ||||| || ||||| || || |||||| |||| | | | Sbjct 313750 TACCATCGGAAGCAGCAAAGAAAGCCAAAACTCTAGACATGAAATATCTTTCAT-TAGCA 313692 Query 34042 TT--AGT--TTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAA 34097 || | | || ||||| |||| | ||| ||||| | ||| | ||||| | ||||| Sbjct 313691 TTCAACTTGTTGTTCCAGTCATCCAAATCCTTAGACAAATCAATCTCTTCAGCAGTCCAG 313632 Query 34098 AATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAATA 34157 || || || ||| ||| || ||||| | |||||| ||||| || | ||||||||| | | Sbjct 313631 AAAGAAGCTTCTTGCTTCTTGTACATTTGCCAGATTTCATGGTACTTGATTGGGAACAAA 313572 Query 34158 ACAAATCT 34165 |||||||| Sbjct 313571 ACAAATCT 313564 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629816671019040