Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ambrosiozyma_20monospora_20[genbank_20GCA_5F001599995.1_202016-03- 01] 118 sequences; 24,978,438 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq23 307 1e-78 seq12 269 3e-67 >seq23 Length=373761 Score = 307 bits (340), Expect = 1e-78 Identities = 1363/2144 (64%), Gaps = 45/2144 (2%) Strand=Plus/Minus Query 64826 ATCCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACAT 64885 ||| || || | ||| |||||||||| ||| | || | || || | |||||| ||||| Sbjct 129907 ATCTTTATCAACTGTAAATTGAATGGCAGCAGCGGCAGCTTGAGTTCTTAGATAATACAT 129848 Query 64886 TCCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGA-ATAAC 64944 || || || | ||| |||| ||||| |||||||| || | || || Sbjct 129847 ACCAGTCTTCAAACCCTTCTTCCAACCGTAGAAATGCATGGAAGTCAACTTACCCATGGT 129788 Query 64945 TCGGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTG 65004 | || ||| | | || || |||| |||||| |||||||| | | || || ||||| | Sbjct 129787 TGGGTTCTTCAAG-TGAATGTTCAAAGATTGGGATTGATCGACGTAAGCACCTCTGTCAG 129729 Query 65005 CAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAA-CTCGCTTA 65063 ||| ||| | || || | |||||| | ||||||||| | ||| || |||| || | | Sbjct 129728 CAGACATATCAATAATAGCCTTTTGAGAAATTTCCCACACAGTCTTGTAAATCTTTTTCA 129669 Query 65064 ATATCTTCTGGAAGGTTTGTA---TTCTGAATGGATCCACCATCTGCCATAATCCTATTC 65120 || || || |||| || | || |||||||| || ||| | ||||| ||| Sbjct 129668 AT-TCATCAGGAACATTAGGCAAGTTTTGAATGGAACCGTTATCAGAAATAATGAAGTTC 129610 Query 65121 TTGATCTCATCATTCCATAATTTTCTCTCGGTTAA--AACTC--TAAGGAGATGCGGATT 65176 || || | ||||| ||| | | ||||| || || | | | | || || Sbjct 129609 TTCATGTTATCATCCCAAAGAC----CCAAGTTAACCAAATCCTTCAACAAGTATGGGTT 129554 Query 65177 AACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTC 65236 || | ||| ||||| |||| ||| ||||| | || |||||| || ||| || || || Sbjct 129553 GACAATTTGGAATTCACCAGCCAAGACTCTTCTAGAGTAAATGTTGGAGGTGTATGGCTC 129494 Query 65237 CACAGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAA 65296 | | | ||||| | ||||| ||||||| ||| || ||||| ||||| || || | ||| Sbjct 129493 GAAACATTCATTGTAACCCAAGATTTGAGAAGTGGAAGCAGTTGGCATTGGAGCTAACAA 129434 Query 65297 TAAACTATTTCTAAGACCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAG 65356 || ||||| | ||||| | || | || || | || ||||| | ||| | Sbjct 129433 CAATGAGTTTCTTAAACCGTGCTTGACAATGTCTTCCTTCAAAGAATCCCACTCCCATAA 129374 Query 65357 ATCCGACGG--TACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGAT 65414 ||| | || | || ||| | | || | | || || Sbjct 129373 ATCAGTTGGCTTCTTACCCCATAAATCAAA--TTGCAATAATCCTTGAGAAGCTGGAGAG 129316 Query 65415 CCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCA 65474 || | | || || |||| ||||| | || || | |||| | || || || | Sbjct 129315 CCCTTAAAAGTTTCATATGCACCTTCTTCCTTGGCCAATTCAACAGAAGCTTCCAAACCG 129256 Query 65475 CCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAAT 65534 ||| ||| | ||||||||||| | | || | |||| ||||| || ||||||| Sbjct 129255 GCGTGATACAAAGTTTCGAAGATTTGAATGTTCAACTCTTTAGCTTCAGGGGAATCAAAT 129196 Query 65535 GGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTA 65594 ||| | || | || || | || ||||| ||||||||||| | | | || ||||| Sbjct 129195 GGAATTCTCAATTGCATGAAAGTATCGGCTAAACCTTGAACACCTAAAGCAATTGGTCTG 129136 Query 65595 TGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTA 65654 | |||| | || || || ||| | || || || || || | || ||||| || Sbjct 129135 TTTCTCATGTTGGATCTTCTAGCAGTTTCAACTGGGTAGTAGTTTCTGTCAATAATCTTG 129076 Query 65655 TTGAGATTTCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATC-GC-- 65711 || | || || | || ||| | | || | || ||| || ||| | | || Sbjct 129075 TTCAAGTTCTTGGTGACCACCTTGGCAATCTCATGCAATTTCTTGAAGTCATACCAGCAA 129016 Query 65712 ------TCATCTA---TTACAAACATGTTCAATGCAACAGATGCCAGATTACAAACGGCT 65762 ||||| | | ||||| ||| |||||||| |||| |||||||| || Sbjct 129015 GTAGTGTCATCAAAAGTAACAAAGGCTGGCAAAGCAACAGAAGCCAAGTTACAAACAGCA 128956 Query 65763 ACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTT 65822 ||| | | || | ||||| | || ||| || | || ||||||| Sbjct 128955 GTTTCAGTTGGGTCGGAATATTCAACAATTTCACAACACAAGTTGGATGACTTGATAACA 128896 Query 65823 CCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTA 65882 || || || | ||| ||| |||||||||||| ||||| || || | ||||| |||||| Sbjct 128895 CCCAAGTTCTTTTGGTTAGACTTTTTGTTACAAGCATCTTTGTACAACATGAAAGGAGTA 128836 Query 65883 CCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGAT 65942 ||||||||| | |||| ||| | || | | ||| | | ||||||| | | | Sbjct 128835 CCAGTTTCAGTTTGAGCTTCCAAGATGGAGTACCACAACTTTTGAGCCTTAACAGTGG-- 128778 Query 65943 TTGTATCTCTT--TTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAA 66000 || || |||| ||| |||| || || ||||| || ||||| || || ||| Sbjct 128777 TTCTACCTCTACCTTCAGTTTCATACTTGGTGTACAACTTCTCAAACTCATCACCATAAA 128718 Query 66001 CATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCA 66060 | | || || ||| ||| || | | ||| | ||| || | | | | Sbjct 128717 CCTCAGATAAACCTGGAGCATCAGAAGGTGAGAACAAAGTCCATTCAGAATTAGATTCAA 128658 Query 66061 CTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAAATCTCTGGTTCTATGTT 66120 ||| ||||| || | ||| |||||||| | |||| || |||||||||| ||| || Sbjct 128657 CTCTCTTCATGAACAAATCTGGAATCCACAAAGCTGGGAACAAATCTCTGGCTCTGATTT 128598 Query 66121 CCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCACGGTT 66180 | || || || ||||||| | | ||| | || | | || ||| ||||| |||| Sbjct 128597 CTTCTTTACCGTGATTCTTTCTGATATCAATAAAGTCAAAGATGTCAGCGTGCCATGGTT 128538 Query 66181 CCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGG 66240 | | || | ||| | | | ||||| | ||||| || || ||||| | |||||||| | Sbjct 128537 CAATATAAAGGGCAAAAGCACCAGGTCTCTTGTTACCACCTTGATCAACATATCTAGCAG 128478 Query 66241 TGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGA 66300 | || || ||||||| | ||| ||||| |||||||| || ||||| ||||| |||| || Sbjct 128477 TATTGTTGAAAACTCTAACCATAGGAATGATACCATTTGAAGTACCGTTGGTACCGGCGA 128418 Query 66301 TATAGCTTCCACTTGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAG 66360 | || ||| | || | ||| || ||| |||||| || || ||||| | |||| Sbjct 128417 TGTAAGAACCAGTGGCTCTAATGTTGTGAATGTGTAGACCAATACCACCTGCAGTCTTAG 128358 Query 66361 AGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGT 66420 | || | || || || || |||||||| || || || ||| ||| ||| ||||| Sbjct 128357 AAATCAGAGCACACTCCTTCAATGTATCATAAATACCTTCAATAGAATCTTCCTTCATGG 128298 Query 66421 TAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAG 66480 || | ||||| |||||||| | ||| ||| || || ||||| || || |||| Sbjct 128297 CAACCAAGAAACAAGAGGACATTTGTGGGCGAGGAGTACCAGCGTTAAACAAAGTTGGAG 128238 Query 66481 AAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCT----GAGTCT 66536 |||| || || || || ||| || | | ||||| ||||| | | || || | | Sbjct 128237 AAGCATGGGTGAAATATCTTTGGGACATCAAGTTGTAAGTCTCTAAAACTTTAGGAATGT 128178 Query 66537 ATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACG 66596 |||| | ||| || || | || || | ||| | || || || ||||||||| | Sbjct 128177 -TATCACCGTGA---ATACCAATGGCAACTCTCATGATCAAATGTTGTGGTCTTTCAGCA 128122 Query 66597 ATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTG 66656 | ||| | ||| |||| | |||||| |||||||||| || ||||| ||||||||| Sbjct 128121 ACCTTACCATCAATTCTCAAAAGATAGGATCTTTCCAAAGTCTTGAAACCGAAATAGTTG 128062 Query 66657 TATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACT 66716 ||| || || || |||||| | || | ||||| | | || || || | || Sbjct 128061 TATTGGAAATCACGGTCGTAATTGATGGCGGAGTTTAACTCTTCAGCATGCTTTTGCACA 128002 Query 66717 ACATCCATGGTAATACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTGACATAG 66776 | || || ||||||| || || || | || ||||| ||||| || ||||| Sbjct 128001 ATCTCATAAGTTTCTTTTGAAATCATAGGGGATAGCTTACCATTCTTAGGGTTAACATAT 127942 Query 66777 TTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGAT 66836 ||| |||| | || | || | ||| | || | |||| ||||||| ||| || Sbjct 127941 TTGTATAATTGTTCAACGACGGAAGAGAATTGCTTAGTGGTTTGCTTGTGTAAATTGGAG 127882 Query 66837 ACGGCTATTCTAGCGGCTATAATGGCATAATCCGGATGTTGTGTAGTACAAGT-GGCTGC 66895 | || |||||||| || | | || ||||| || || || || || || || || Sbjct 127881 ATAGCAATTCTAGCAGCCAAGACAGCGTAATCAGGGTGGACAGTGGT-CATGTAAGCAGC 127823 Query 66896 TATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCAT 66939 |||| || |||| | |||||||| | ||||| || |||| Sbjct 127822 GGTTTCAGCAGCCAAGTTATCCAATTCAATGGTTGTAACACCAT 127779 >seq12 Length=722896 Score = 269 bits (298), Expect = 3e-67 Identities = 606/905 (67%), Gaps = 9/905 (1%) Strand=Plus/Minus Query 35844 CTTCTTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAG 35903 |||||| || |||||| || ||||| || ||| || | || ||||| || |||| Sbjct 314466 CTTCTT-AGCCATAACACCAGCCTTTTGATAGTCAGAAACTCTCTTCTCGAAGAAGTTAG 314408 Query 35904 TTTTACCTTCTAATGATATATTTTCCATGAAATCGAATGGATTGATAACATTATAAAttt 35963 | ||||| | || || |||||||||||||| |||||||| || | || || || || | Sbjct 314407 TCTTACCAGCCAAGGAAATATTTTCCATGAAGTCGAATGGGTTTGTGACGTTGTAGATCT 314348 Query 35964 ttttAAATCCCAATTCAGAAATCAATCTATCTGCGACAAATTCTATATATGTTTTCATCA 36023 | || ||||||| || | |||||| || || |||||||| | ||| ||||| Sbjct 314347 TCTTGCATCCCAAAGCAACCAACAATCTGTCAGCAACAAATTCAACGTATTGACACATCA 314288 Query 36024 TTTCACAATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGT-AAGAAATTCTTGTTCA 36082 ||||| ||||| || | | || ||||| | ||| |||| ||| | |||| |||| Sbjct 314287 AGTCACAGTTCATACCCAACAACTTGACTGGCAAAGCATCAGTGAAGTATCTCTT-TTCA 314229 Query 36083 ATAGAGACCGCGTCTGTTATAATAGATATTACTGTTTCTTCACTCGGTGGATACAATAAA 36142 || || || || || ||||| || |||||||| || | | || Sbjct 314228 ATGTCAACGGCTTCAGTGATAATCTTGGCAACAATTTCTTCATCTGGGGTGTTGTTCAAG 314169 Query 36143 TGTTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCG 36202 || || | |||||| |||||||| || ||||| || ||||||| || |||||| Sbjct 314168 TGAGAGAATAACAAACAAGCGAAATCAGTATGCAGACCTTCATCTCTACAGATCAATTCG 314109 Query 36203 TTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAAT 36262 || || || || | || ||||| | || | ||| || | ||| || |||| ||||| Sbjct 314108 TTAGAGAAAGTCAAACCTGGCATCAAACCTCTCTTCTTCAACCAGAAGATGGCAGCAAAA 314049 Query 36263 GATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCG 36322 || ||||| |||||||| || || || || |||||||||| | ||| || ||| | Sbjct 314048 GAACCAGAGAAGAAAATACCCTCAACAGCAGCAAAGGCAACCAATCTTTCACCAAACAAA 313989 Query 36323 GCACTGTCATGT---ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATT 36379 ||| | |||| ||||| | |||||| || || || | | | | ||| || | Sbjct 313988 GCATTTTCATCAGAAATCCATCTCAAAGCCCAGTCCGCTTTTTCTCTGATACATGGAACG 313929 Query 36380 GTCTCTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATC 36439 | || |||||||| || | | | ||| || ||| || ||||| || |||||| Sbjct 313928 TTATCAATAGCATTGAATAAGAAATCAGCTTCCTTTGGATCCTTGACATAAGTGTCAATC 313869 Query 36440 AAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACAT 36499 || ||| || |||| || || |||||||| || ||||| || ||||||||||| Sbjct 313868 AATAGAGAGTAAGTTTCAGAGTGGATGTTTTCCATCATGATTTGGAAACCGTAGAAACAC 313809 Query 36500 CTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATT 36559 |||| || | || || ||||| | | | || ||| | || |||||||| || || Sbjct 313808 TTAGCTTCAGGAACTTGAACTTCAGCAGAGAAGTTTTCAACCAAGTTTTCATTGACAATA 313749 Query 36560 CCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTTTGGTGTT 36619 || || || ||||| || ||||| || || |||||| |||| || | | Sbjct 313748 CCATCGGAAGCAGCAAAGAAAGCCAAAACTCTAGACATGAAATATCTTTCATTAGCATTC 313689 Query 36620 A---GTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAAT 36676 | || ||||| |||| | ||| ||||| | ||| | ||||| | ||||| || Sbjct 313688 AACTTGTTGTTCCAGTCATCCAAATCCTTAGACAAATCAATCTCTTCAGCAGTCCAGAAA 313629 Query 36677 GATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACA 36736 || || ||| ||| || ||||| | |||||| ||||| || | ||||| || | |||| Sbjct 313628 GAAGCTTCTTGCTTCTTGTACATTTGCCAGATTTCATGGTACTTGATTGGGAACAAAACA 313569 Query 36737 AATCT 36741 ||||| Sbjct 313568 AATCT 313564 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658171829195120