Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ambrosiozyma_20monospora_20[genbank_20GCA_5F001599995.1_202016-03-
01] 118 sequences; 24,978,438 total letters
Query= NC_003529.1
Length=155060
Score E
Sequences producing significant alignments: (Bits) Value
seq12 96.9 3e-15
seq3 86.0 6e-12
>seq12
Length=722896
Score = 96.9 bits (106), Expect = 3e-15
Identities = 284/427 (67%), Gaps = 13/427 (3%)
Strand=Plus/Plus
Query 52529 TACTCAACGCTTTTGACAATGTTCCGTGTGTGCGCAAAAAGGATGATTGGGCATTGAAAT 52588
|| |||| ||| |||| || ||||| ||| | | |||| | || ||||| |||| ||
Sbjct 313910 TATTCAATGCTATTGATAACGTTCCATGTATCAGAGAAAAAGCGGACTGGGCTTTGAGAT 313969
Query 52589 GGATCGAAAACGACAAAGCCACTTTTGCCGAACGTCTGGTCGCGTTTGCTATAGTGGAAG 52648
|||| | || || || |||| ||| | |||| || |||||| || || |
Sbjct 313970 GGATTTCTGATGAAAATGCTTTGTTTGGTGAAAGATTGGTTGCCTTTGCTGCTGTTGAGG 314029
Query 52649 GTGTGtttttttCGGGTAGTTTTGCGGCAATATTTTACATCAAAACCTTGGGCATAATGC 52708
|| | || || || ||| |||||| || || || | | || | || | ||||
Sbjct 314030 GTATTTTCTTCTCTGGTTCTTTTGCTGCCATCTTCTGGTTGAAGAAGAGAGGTTTGATGC 314089
Query 52709 CCGGCCTCACGTTTAGCAACGAGTTGATATCGCGCGACGAAGGAATGCACACAGATTTTG 52768
| || | || || ||||| ||||| | | || ||||| |||| || ||||| |
Sbjct 314090 CAGGTTTGACTTTCTCTAACGAATTGATCTGTAGAGATGAAGGTCTGCATACTGATTTCG 314149
Query 52769 CGTGTTTGTATTATAATACGCGCGTTAAAGAAAAATTGTCATATGAAAAAATTCTAGACA 52828
| ||||||| ||| | | | | || || || | || ||||| ||||| | | ||
Sbjct 314150 CTTGTTTGT--TATTCT-CTCAC-TTGAACAACACCC--CAGATGAAGAAATTGTTGCCA 314203
Query 52829 TGTTTAAA---GAGGCCGTCGACATTGAAAA-AGAGTTTTTTACGGACGCTTTACCCGTA 52884
| ||| || ||||| ||||||||||| ||| | || || || ||||| || ||
Sbjct 314204 AGATTATCACTGAAGCCGTTGACATTGAAAAGAGA-TACTTCACTGATGCTTTGCCAGTC 314262
Query 52885 TCATTGTTGGGCATGAAC-GCGACCATGATGTGCGAGTACATCGAGTTTGTTGCGGACAG 52943
|||||||| |||||| | || | ||||||| | ||| | || |||||||| |||||
Sbjct 314263 AAGTTGTTGGGTATGAACTGTGA-CTTGATGTGTCAATACGTTGAATTTGTTGCTGACAG 314321
Query 52944 ACTGTTG 52950
| |||||
Sbjct 314322 ATTGTTG 314328
>seq3
Length=1000385
Score = 86.0 bits (94), Expect = 6e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
|| |||| || | |||||| ||||| | || || || ||||||||||| || ||| |
Sbjct 936294 CCACCTCTCAATCTCAAAACCAAGTGCAAAGTGGATTCCTTTTGAATGTTGTAGTCGGAC 936353
Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657
| || || |||||| | || ||||| ||| |||||| | ||| ||||| || ||
Sbjct 936354 AAGGTTCTACCGTCTTCCAATTGCTTACCGGCAAAGATCAATCTTTGTTGATCAGGTGGG 936413
Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717
|| ||||| || || ||| || || | | || | ||||||| | || ||
Sbjct 936414 ATACCTTCCTTATCTTGGATCTTGGACTTGACATTGTCAATGGTGTCGGAAGATTCAACT 936473
Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764
|| | ||| | ||||| || ||||| || || || || ||||||||
Sbjct 936474 TCCAAGGTAATTGTCTTACCAGTCAAGGTCTTAACAAAAATTTGCAT 936520
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496063268305600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |