Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ambrosiozyma_20monospora_20[genbank_20GCA_5F001599995.1_202016-03- 01] 118 sequences; 24,978,438 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq23 378 1e-99 seq12 277 3e-69 >seq23 Length=373761 Score = 378 bits (418), Expect = 1e-99 Identities = 1380/2144 (64%), Gaps = 45/2144 (2%) Strand=Plus/Minus Query 78705 ATCCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACAT 78764 ||| || || | ||| |||||||||| ||| | || | || || | |||||| ||||| Sbjct 129907 ATCTTTATCAACTGTAAATTGAATGGCAGCAGCGGCAGCTTGAGTTCTTAGATAATACAT 129848 Query 78765 TCCCGTTTTTAGACCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTGGA-ATAAC 78823 || || || | ||| |||| |||||||||||||| || | || || Sbjct 129847 ACCAGTCTTCAAACCCTTCTTCCAACCGTAGAAATGCATGGAAGTCAACTTACCCATGGT 129788 Query 78824 TCGGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTG 78883 | || ||| | | || || |||| |||||| |||||||| | | || || ||||| | Sbjct 129787 TGGGTTCTTCAAG-TGAATGTTCAAAGATTGGGATTGATCGACGTAAGCACCTCTGTCAG 129729 Query 78884 CAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAA-CTCGCTTA 78942 ||| ||| | || || | |||||| | ||||||||| | ||| || |||| || | | Sbjct 129728 CAGACATATCAATAATAGCCTTTTGAGAAATTTCCCACACAGTCTTGTAAATCTTTTTCA 129669 Query 78943 ATATCTTCTGGAAGGTTTGTA---TTCTGAATGGATCCACCATCTGCCATAATCCTATTC 78999 || || || |||| || | || |||||||| || ||| | ||||| ||| Sbjct 129668 AT-TCATCAGGAACATTAGGCAAGTTTTGAATGGAACCGTTATCAGAAATAATGAAGTTC 129610 Query 79000 TTGATCTCTTCATTCCATAATTTTCTCTCGGTTAA--AACTC--TAAGGAGATGCGGATT 79055 || || | |||| ||| | | ||||| || || | | | | || || Sbjct 129609 TTCATGTTATCATCCCAAAGAC----CCAAGTTAACCAAATCCTTCAACAAGTATGGGTT 129554 Query 79056 AACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTC 79115 || | ||| ||||| |||| ||| ||||| | || |||||| || ||| ||||| || Sbjct 129553 GACAATTTGGAATTCACCAGCCAAGACTCTTCTAGAGTAAATGTTGGAGGTGTATGGCTC 129494 Query 79116 CACCGATTCATTATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAA 79175 | ||||||| | ||||| ||||||| ||| || || |||||||| || || | ||| Sbjct 129493 GAAACATTCATTGTAACCCAAGATTTGAGAAGTGGAAGCAGTTGGCATTGGAGCTAACAA 129434 Query 79176 TAAACTATTTCTAAGACCGTA--TGATCTGATTTTATCTTTTAGAGATTCCCAATCCCAA 79233 || ||||| | ||||| ||| || | || || | ||| ||||| ||||| Sbjct 129433 CAATGAGTTTCTTAAACCGTGCTTGACA--ATGTCTTCCTTCAAAGAATCCCACTCCCAT 129376 Query 79234 AGATCAGACGGGACAACATTCCAAAGATCATATTGTAGAATACCGTTACTAGCGTATGAT 79293 | ||||| || | ||| | |||| |||| | | || | | ||| || Sbjct 129375 AAATCAGTTGGCTTCTTACCCCATAAATCAAATTGCAATAATCCTTGAGAAGCTGGAGAG 129316 Query 79294 CCTGTGTATGTTTCATAAGGTCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAATGCT 79353 || | | |||||||| | ||||| | | ||| |||||| | || || || | Sbjct 129315 CCCTTAAAAGTTTCATATGCACCTTCTTCCTTGGCCAATTCAACAGAAGCTTCCAAACCG 129256 Query 79354 CCGTAATAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGGCTATCAAAT 79413 ||| ||| | |||||||| || | | || | |||| ||||| || ||||||| Sbjct 129255 GCGTGATACAAAGTTTCGAAGATTTGAATGTTCAACTCTTTAGCTTCAGGGGAATCAAAT 129196 Query 79414 GGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTA 79473 ||| | || | || || | || ||||| ||||||||||| | | | || ||||| Sbjct 129195 GGAATTCTCAATTGCATGAAAGTATCGGCTAAACCTTGAACACCTAAAGCAATTGGTCTG 129136 Query 79474 TGTCTCTTATTAGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTA 79533 | |||| | || || || ||| | || || || || || | || ||||| || Sbjct 129135 TTTCTCATGTTGGATCTTCTAGCAGTTTCAACTGGGTAGTAGTTTCTGTCAATAATCTTG 129076 Query 79534 TTGAGATTCCTGACTATTACTTTGACCACATCCTTTAGTTTGAGAAAATCAAATCGTC-- 79591 || | ||| || | || ||| | | || | | ||| || ||| | | | Sbjct 129075 TTCAAGTTCTTGGTGACCACCTTGGCAATCTCATGCAATTTCTTGAAGTCATACCAGCAA 129016 Query 79592 -------CATCTA---TTACAAACATGTTCAACGCGACAGATGCCAGATTACAAACGGCT 79641 |||| | | ||||| ||| || ||||| |||| |||||||| || Sbjct 129015 GTAGTGTCATCAAAAGTAACAAAGGCTGGCAAAGCAACAGAAGCCAAGTTACAAACAGCA 128956 Query 79642 ACCTCATTAGCATCCGCATATTGTATTATTTCAGTGCAGAGGTTACTACACTTAATGGTT 79701 ||| | | || | ||||| | |||||| || | ||| |||| || Sbjct 128955 GTTTCAGTTGGGTCGGAATATTCAACAATTTCACAACACAAGTTGGATGACTTGATAACA 128896 Query 79702 CCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAACGGAGTA 79761 || || || | ||| ||| |||||||||||| ||||| || || | ||||| |||||| Sbjct 128895 CCCAAGTTCTTTTGGTTAGACTTTTTGTTACAAGCATCTTTGTACAACATGAAAGGAGTA 128836 Query 79762 CCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGAC 79821 ||||||||| | |||| ||| | || | | ||| | | ||||||| | | | Sbjct 128835 CCAGTTTCAGTTTGAGCTTCCAAGATGGAGTACCACAACTTTTGAGCCTTAACAGTGG-- 128778 Query 79822 TTGTATCTCTT--TTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAA 79879 || || |||| ||| |||| || | || || || || ||||| || || ||| Sbjct 128777 TTCTACCTCTACCTTCAGTTTCATACTTGGTGTACAACTTCTCAAACTCATCACCATAAA 128718 Query 79880 CATCGTCTAATCCAGGACATTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTTA 79939 | || ||| || ||| || ||| | | ||| | ||| || || | | | Sbjct 128717 CCTCAGATAAACCTGGAGCATCAGAAGGTGAGAACAAAGTCCATTCAGAATTAGATTCAA 128658 Query 79940 CTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCT 79999 ||| ||||| || | ||| |||||||| | |||| || | |||||||| ||| | Sbjct 128657 CTCTCTTCATGAACAAATCTGGAATCCACAAAGCTGGGAACAAATCTCTGGCTCTGATTT 128598 Query 80000 CCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTT 80059 | || || || ||||||| | | ||| | || | | || |||| ||||| |||| Sbjct 128597 CTTCTTTACCGTGATTCTTTCTGATATCAATAAAGTCAAAGATGTCAGCGTGCCATGGTT 128538 Query 80060 CCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGG 80119 | | || | ||| | | | || |||| ||||| || || ||||| | |||||||| | Sbjct 128537 CAATATAAAGGGCAAAAGCACCAGGTCTCTTGTTACCACCTTGATCAACATATCTAGCAG 128478 Query 80120 TGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGA 80179 | || || ||||||| | ||| ||||| |||||||| || ||||| ||||| |||| || Sbjct 128477 TATTGTTGAAAACTCTAACCATAGGAATGATACCATTTGAAGTACCGTTGGTACCGGCGA 128418 Query 80180 TATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAG 80239 | || ||| |||| | ||| || ||| |||||| || || ||||| | |||| Sbjct 128417 TGTAAGAACCAGTGGCTCTAATGTTGTGAATGTGTAGACCAATACCACCTGCAGTCTTAG 128358 Query 80240 AGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATGCTATCATCAATCATGT 80299 | || | || || || || |||||||| || || || || ||| || ||||| Sbjct 128357 AAATCAGAGCACACTCCTTCAATGTATCATAAATACCTTCAATAGAATCTTCCTTCATGG 128298 Query 80300 TAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAG 80359 || | ||||| |||||||| | ||| ||| || || ||||| || || |||| Sbjct 128297 CAACCAAGAAACAAGAGGACATTTGTGGGCGAGGAGTACCAGCGTTAAACAAAGTTGGAG 128238 Query 80360 AAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCT----GATTCT 80415 |||| || || || || ||| |||| | ||||| ||||| | | || || | | Sbjct 128237 AAGCATGGGTGAAATATCTTTGGGACATCAAGTTGTAAGTCTCTAAAACTTTAGGAATGT 128178 Query 80416 ATATCCCATTGATGAATTCCTACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAACG 80475 |||| | ||| || || | || || | ||| | || || || ||||||||| | Sbjct 128177 -TATCACCGTGA---ATACCAATGGCAACTCTCATGATCAAATGTTGTGGTCTTTCAGCA 128122 Query 80476 ATCTTGTTATTTATTTTCAACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAGTTG 80535 | ||| || ||| |||| | || ||| |||||||||| || ||||| ||||||||| Sbjct 128121 ACCTTACCATCAATTCTCAAAAGATAGGATCTTTCCAAAGTCTTGAAACCGAAATAGTTG 128062 Query 80536 TATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACT 80595 ||| || || || |||||| | || | ||||| | | || || || | || Sbjct 128061 TATTGGAAATCACGGTCGTAATTGATGGCGGAGTTTAACTCTTCAGCATGCTTTTGCACA 128002 Query 80596 ACATCCATGGTGATACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAG 80655 | || || ||||||| || || || | || ||||| ||||| |||||||| Sbjct 128001 ATCTCATAAGTTTCTTTTGAAATCATAGGGGATAGCTTACCATTCTTAGGGTTAACATAT 127942 Query 80656 TTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGAT 80715 ||| |||| | || | || | ||| | || | |||| |||||||| ||| || Sbjct 127941 TTGTATAATTGTTCAACGACGGAAGAGAATTGCTTAGTGGTTTGCTTGTGTAAATTGGAG 127882 Query 80716 ACGGCTATTCTGGCGGCTAAAATGGCATAATCTGGATGTTGTGTAGTACAAGT-GGCTGC 80774 | || ||||| || || || | || ||||| || || || || || || || || Sbjct 127881 ATAGCAATTCTAGCAGCCAAGACAGCGTAATCAGGGTGGACAGTGGT-CATGTAAGCAGC 127823 Query 80775 TATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCAT 80818 |||| || |||| | |||||||| | ||||| || |||| Sbjct 127822 GGTTTCAGCAGCCAAGTTATCCAATTCAATGGTTGTAACACCAT 127779 >seq12 Length=722896 Score = 277 bits (306), Expect = 3e-69 Identities = 612/907 (67%), Gaps = 13/907 (1%) Strand=Plus/Minus Query 49646 CTTCTTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAG 49705 |||||| || |||||| || ||||| || ||| || | || ||||| || |||| Sbjct 314466 CTTCTT-AGCCATAACACCAGCCTTTTGATAGTCAGAAACTCTCTTCTCGAAGAAGTTAG 314408 Query 49706 TTTTTCCTTCCAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAttt 49765 | || || |||| || |||||||||||||| || || || || || || || || || | Sbjct 314407 TCTTACCAGCCAAGGAAATATTTTCCATGAAGTCGAATGGGTTTGTGACGTTGTAGATCT 314348 Query 49766 ttttAAATCCCAATTCAGAAATCAATCTATCCGCGACAAATTCTATATATGTTTTCATCA 49825 | || ||||||| || | |||||| || || |||||||| | ||| ||||| Sbjct 314347 TCTTGCATCCCAAAGCAACCAACAATCTGTCAGCAACAAATTCAACGTATTGACACATCA 314288 Query 49826 TTTCACAATTCATTCCTATAAGTTTAACTGGAAGAGCCGCAGT-AAGAAATTCTTGTTCA 49884 ||||| ||||| || | | || ||||| | ||| |||| ||| | |||| |||| Sbjct 314287 AGTCACAGTTCATACCCAACAACTTGACTGGCAAAGCATCAGTGAAGTATCTCTT-TTCA 314229 Query 49885 ATGGATACCGCATCTGTTATAATAGATCTAACGGTTTCTTCA-CTCGGTGGATGCAATAA 49943 ||| || || || || ||||| ||| |||||||| || || | || || Sbjct 314228 ATGTCAACGGCTTCAGTGATAATCTTGGCAACAATTTCTTCATCTGGGGTGTTGTTC-AA 314170 Query 49944 ATGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTC 50003 || || | |||||| |||||||| |||||||| || ||||||| || | ||| Sbjct 314169 GTGAGAGAATAACAAACAAGCGAAATCAGTATGCAGACCTTCATCTCTACAGATCAATTC 314110 Query 50004 GTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAA 50063 ||| || || || | || ||||| | || | ||| || | ||| || |||| ||||| Sbjct 314109 GTTAGAGAAAGTCAAACCTGGCATCAAACCTCTCTTCTTCAACCAGAAGATGGCAGCAAA 314050 Query 50064 TGACCCAGAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACT 50123 || ||||| ||||| || || || || || ||||||||||| | ||| || ||| | Sbjct 314049 AGAACCAGAGAAGAAAATACCCTCAACAGCAGCAAAGGCAACCAATCTTTCACCAAACAA 313990 Query 50124 GGCGCTGTCAT---GTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCAT 50180 || | |||| ||||| | |||||| || || || | | | | ||| || | Sbjct 313989 AGCATTTTCATCAGAAATCCATCTCAAAGCCCAGTCCGCTTTTTCTCTGATACATGG-AA 313931 Query 50181 CGTT-TCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGA 50239 |||| || || ||||| || | | | ||| || ||| || |||||||| || | Sbjct 313930 CGTTATCAATAGCATTGAATAAGAAATCAGCTTCCTTTGGATCCTTGACATAAGTGTCAA 313871 Query 50240 TCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAAC 50299 |||| ||| || |||| || || |||||||| || || || || |||||||||| Sbjct 313870 TCAATAGAGAGTAAGTTTCAGAGTGGATGTTTTCCATCATGATTTGGAAACCGTAGAAAC 313811 Query 50300 ATCTAGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTA 50359 | |||| || | || || ||||| | | | || |||| | || |||||||| || | Sbjct 313810 ACTTAGCTTCAGGAACTTGAACTTCAGCAGAGAAGTTTTCAACCAAGTTTTCATTGACAA 313751 Query 50360 TTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATGTTTTTCGTTGGGTG 50419 | || || || ||||| || ||||| || || |||| | |||| || | Sbjct 313750 TACCATCGGAAGCAGCAAAGAAAGCCAAAACTCTAGACATGAAATATCTTTCATTAGCAT 313691 Query 50420 TTA---GTTTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAA 50476 | | || ||||| |||| | ||| ||||| | ||| | ||||| | ||||| | Sbjct 313690 TCAACTTGTTGTTCCAGTCATCCAAATCCTTAGACAAATCAATCTCTTCAGCAGTCCAGA 313631 Query 50477 ATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAA 50536 | || || ||| ||| || ||||| | |||||| ||||| || | ||||||||| | || Sbjct 313630 AAGAAGCTTCTTGCTTCTTGTACATTTGCCAGATTTCATGGTACTTGATTGGGAACAAAA 313571 Query 50537 CAAATCT 50543 ||||||| Sbjct 313570 CAAATCT 313564 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718267740553520