Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ambrosiozyma_20monospora_20[genbank_20GCA_5F001599995.1_202016-03- 01] 118 sequences; 24,978,438 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq12 279 5e-70 >seq12 Length=722896 Score = 279 bits (308), Expect = 5e-70 Identities = 550/804 (68%), Gaps = 20/804 (2%) Strand=Plus/Minus Query 13514 CAATAAA-AACTAAAAATCAACATCTAATGAAAAAACATT---------ATCGTCTTTGT 13563 |||||| || || |||||| |||| || || ||| | || ||| || || | Sbjct 314521 CAATAATCAATTAGAAATCATCATCGAAAGAGAAACCGTTTTCAACAGGATCCTCCTTCT 314462 Query 13564 TAGAAATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTAC 13623 ||| ||||| || |||||||| ||| |||||| || || ||||||||||| |||| Sbjct 314461 TAGCCATAACACCAGCCTTTTGATAGTCAGAAACTCTCTTCTCGAAGAAGTTAGTCTTAC 314402 Query 13624 CTTCCAGTGATATATTTTCCATAAAATCAAATGGATTTATTGACATAA-ACACTTTATCA 13682 | ||| || ||||||||||| || || ||||| ||| | ||| | | | || | Sbjct 314401 CAGCCAAGGAAATATTTTCCATGAAGTCGAATGGGTTTGT-GACGTTGTAGATCTTCTTG 314343 Query 13683 CAACCTAGTTCTAATAGTAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCA 13742 || || | | | | ||||| ||||||| ||| |||| |||||| |||| || ||| Sbjct 314342 CATCCCAAAGCAACCAACAATCTGTCAGCAACAAATTCAACGTATTGACACATCAAGTCA 314283 Query 13743 CAATTCATACCTATTAGTTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGAC 13802 || |||||||| | | || || || | || || || || ||||| || Sbjct 314282 CAGTTCATACCCAACAACTTGACTGGCAAAGCATCAGTGAAGTATCTCTTTTCAATGTCA 314223 Query 13803 ACAGCCTCTTTTATAATAATTGTAATAATCTCATTAGAAGGAGGATATTTTAGATGTTTA 13862 || || || | ||||| | | || ||| || | | || | | || | || Sbjct 314222 ACGGCTTCAGTGATAATCTTGGCAACAATTTCTTCATCTGGGGTGTTGTTCAAGTGAGAG 314163 Query 13863 AAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAA 13922 || | ||||| || |||||| ||| || || |||||||||| || | |||||| || Sbjct 314162 AATAACAAACAAGCGAAATCAGTATGCAGACCTTCATCTCTACAGATCAATTCGTTAGAG 314103 Query 13923 AATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCAAATGACCCG 13982 || || || ||||||||||| |||| || || ||||| || || |||||||| || || Sbjct 314102 AAAGTCAAACCTGGCATCAAACCTCTCTTCTTCAACCAGAAGATGGCAGCAAAAGAACCA 314043 Query 13983 GAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTT 14042 || ||||| || |||||||| |||||||| || | |||| ||| |||||| | || ||| Sbjct 314042 GAGAAGAAAATACCCTCAACAGCAGCAAAGGCAACCAATCTTTCACCAAACAAAGCATTT 313983 Query 14043 TTGTTCGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTT-TC 14101 | | || |||||| | |||||| || | ||||| | | ||| | | | ||| || Sbjct 313982 TCATCAGAAATCCATCTCAAAGCCCAGTCCGCTTTTTCTCTGATACA-TGGAACGTTATC 313924 Query 14102 AATAGCATTAAATAAATATTC--CTTCTCTTTAG-TACTTGAAATGTATGTATCAATAAG 14158 ||||||||| ||||| | || |||| |||| | | ||||| | || || ||||| | Sbjct 313923 AATAGCATTGAATAAGAAATCAGCTTC-CTTTGGATCCTTGACA--TAAGTGTCAATCAA 313867 Query 14159 TAAGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAGCATCT 14218 || || |||||||||| ||||||||||| || || ||||| || || || | Sbjct 313866 TAGAGAGTAAGTTTCAGAGTGGATGTTTTCCATCATGATTTGGAAACCGTAGAAACACTT 313807 Query 14219 AGCTTCCGACCATTGTACTTCCGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACC 14278 |||||| | ||| ||||| | | || |||| |||| |||||||| || ||||| Sbjct 313806 AGCTTCAGGAACTTGAACTTCAGCAGAGAAGTTTTCAACCAAGTTTTCATTGACAATACC 313747 Query 14279 ATCACTAGCTGCAAAAAATGCCAA 14302 ||| ||| ||||| || ||||| Sbjct 313746 ATCGGAAGCAGCAAAGAAAGCCAA 313723 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479727292401200