Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ambrosiozyma_20monospora_20[genbank_20GCA_5F001599995.1_202016-03- 01] 118 sequences; 24,978,438 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq12 277 2e-69 >seq12 Length=722896 Score = 277 bits (306), Expect = 2e-69 Identities = 624/924 (68%), Gaps = 19/924 (2%) Strand=Plus/Minus Query 13335 AACATTATCGTCTTTGTTAGAAATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTC 13394 |||| ||| || || |||| ||||| || |||||||| ||| |||||| || || Sbjct 314478 AACAGGATCCTCCTTCTTAGCCATAACACCAGCCTTTTGATAGTCAGAAACTCTCTTCTC 314419 Query 13395 AAAAAAGTTAGTTTTACCTTCCAGTGATATATTTTCCATAAAATCGAATGGATTTGTTGA 13454 || |||||||| ||||| ||| || ||||||||||| || |||||||| ||||| || Sbjct 314418 GAAGAAGTTAGTCTTACCAGCCAAGGAAATATTTTCCATGAAGTCGAATGGGTTTGT-GA 314360 Query 13455 CATAA-ACACTTTATCACAACCTAGTTCTAATAATAATCTATCAGCAATAAACTCAATAT 13513 | | | | || | || || | | | || ||||| ||||||| ||| |||| | Sbjct 314359 CGTTGTAGATCTTCTTGCATCCCAAAGCAACCAACAATCTGTCAGCAACAAATTCAACGT 314300 Query 13514 ATTGAGACATTAAATCACAATTCATACCTATTAGTTTTACAGGAATTATATTAGTTAAAA 13573 ||||| |||| || ||||| |||||||| | | || || || | || ||| || Sbjct 314299 ATTGACACATCAAGTCACAGTTCATACCCAACAACTTGACTGGCAAAGCATCAGTGAAGT 314240 Query 13574 ATTCTTTTTCTATAGACACAGCCTCGTTTATAATAATCTTAATAATGTCATTAGAAGGAG 13633 || ||||| || || || || | ||||| | || ||| || | | || | Sbjct 314239 ATCTCTTTTCAATGTCAACGGCTTCAGTGATAATCTTGGCAACAATTTCTTCATCTGGGG 314180 Query 13634 GATATTTTAGATGTTTAAAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTAC 13693 | || | || || | ||||| || |||||| ||| || || |||||||||| Sbjct 314179 TGTTGTTCAAGTGAGAGAATAACAAACAAGCGAAATCAGTATGCAGACCTTCATCTCTAC 314120 Query 13694 TAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATA 13753 || | |||||| || || || || ||||||||||| |||| || || ||||| || | Sbjct 314119 AGATCAATTCGTTAGAGAAAGTCAAACCTGGCATCAAACCTCTCTTCTTCAACCAGAAGA 314060 Query 13754 TTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAGTCGTT 13813 | ||||| || || || || ||||| || |||||||| |||||||| || | | || || Sbjct 314059 TGGCAGCAAAAGAACCAGAGAAGAAAATACCCTCAACAGCAGCAAAGGCAACCAATCTTT 314000 Query 13814 CTCCAAACGATGCTTTTTTGTTTGATATCCATTTTCTAGCCCATTCAGAtttttttttAA 13873 | |||||| | || |||| | || |||||| | |||||| || | ||||| | | | Sbjct 313999 CACCAAACAAAGCATTTTCATCAGAAATCCATCTCAAAGCCCAGTCCGCTTTTTCTCTGA 313940 Query 13874 TAAAATCCATTGTT-TCGATTGCATTGAATAAATGTTC--CTTCTCTTTAG-TACTTGAA 13929 || | | | ||| || || ||||||||||| || |||| |||| | | ||||| Sbjct 313939 TACA-TGGAACGTTATCAATAGCATTGAATAAGAAATCAGCTTC-CTTTGGATCCTTGAC 313882 Query 13930 ATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCTATAGCTATCTGA 13989 | || || ||||| | || || |||||||||| |||||||| || || || Sbjct 313881 A--TAAGTGTCAATCAATAGAGAGTAAGTTTCAGAGTGGATGTTTTCCATCATGATTTGG 313824 Query 13990 AAACCATAAAAACATCTAGCTTCTGACCATTGTACCTCCGAGTAAAATCTTTCTGCCAAG 14049 ||||| || ||||| ||||||| | ||| || || | | || |||| ||||| Sbjct 313823 AAACCGTAGAAACACTTAGCTTCAGGAACTTGAACTTCAGCAGAGAAGTTTTCAACCAAG 313764 Query 14050 TTTTCATTAACAATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTAT 14109 |||||||| ||||||||||| ||| ||||| || ||||| | | || || ||| Sbjct 313763 TTTTCATTGACAATACCATCGGAAGCAGCAAAGAAAGCCAAAACTCTAGACATGAAATAT 313704 Query 14110 TGCTCTTCATT---GTTGA---GTTTTTTCCAATCGGCTAAATCCTTAGAAAGATCTACT 14163 || |||||| || | || ||||| || | ||||||||||| | ||| | Sbjct 313703 --CT-TTCATTAGCATTCAACTTGTTGTTCCAGTCATCCAAATCCTTAGACAAATCAATC 313647 Query 14164 TCATCAACTGTCCAAAAACTAGCGACAGCTTTTTTATACATTACCCATATTTCTTTATAT 14223 || ||| | ||||| ||| ||| | || || |||||| ||| ||||| | || Sbjct 313646 TCTTCAGCAGTCCAGAAAGAAGCTTCTTGCTTCTTGTACATTTGCCAGATTTCATGGTAC 313587 Query 14224 AATATAGGAAAAACTACAAATCTT 14247 || || || | ||||||||| Sbjct 313586 TTGATTGGGAACAAAACAAATCTT 313563 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478588094081520