Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ambrosiozyma_20monospora_20[genbank_20GCA_5F001599995.1_202016-03-
01] 118 sequences; 24,978,438 total letters
Query= NC_004003.1
Length=149599
Score E
Sequences producing significant alignments: (Bits) Value
seq12 277 2e-69
>seq12
Length=722896
Score = 277 bits (306), Expect = 2e-69
Identities = 624/924 (68%), Gaps = 19/924 (2%)
Strand=Plus/Minus
Query 13335 AACATTATCGTCTTTGTTAGAAATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTC 13394
|||| ||| || || |||| ||||| || |||||||| ||| |||||| || ||
Sbjct 314478 AACAGGATCCTCCTTCTTAGCCATAACACCAGCCTTTTGATAGTCAGAAACTCTCTTCTC 314419
Query 13395 AAAAAAGTTAGTTTTACCTTCCAGTGATATATTTTCCATAAAATCGAATGGATTTGTTGA 13454
|| |||||||| ||||| ||| || ||||||||||| || |||||||| ||||| ||
Sbjct 314418 GAAGAAGTTAGTCTTACCAGCCAAGGAAATATTTTCCATGAAGTCGAATGGGTTTGT-GA 314360
Query 13455 CATAA-ACACTTTATCACAACCTAGTTCTAATAATAATCTATCAGCAATAAACTCAATAT 13513
| | | | || | || || | | | || ||||| ||||||| ||| |||| |
Sbjct 314359 CGTTGTAGATCTTCTTGCATCCCAAAGCAACCAACAATCTGTCAGCAACAAATTCAACGT 314300
Query 13514 ATTGAGACATTAAATCACAATTCATACCTATTAGTTTTACAGGAATTATATTAGTTAAAA 13573
||||| |||| || ||||| |||||||| | | || || || | || ||| ||
Sbjct 314299 ATTGACACATCAAGTCACAGTTCATACCCAACAACTTGACTGGCAAAGCATCAGTGAAGT 314240
Query 13574 ATTCTTTTTCTATAGACACAGCCTCGTTTATAATAATCTTAATAATGTCATTAGAAGGAG 13633
|| ||||| || || || || | ||||| | || ||| || | | || |
Sbjct 314239 ATCTCTTTTCAATGTCAACGGCTTCAGTGATAATCTTGGCAACAATTTCTTCATCTGGGG 314180
Query 13634 GATATTTTAGATGTTTAAAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTAC 13693
| || | || || | ||||| || |||||| ||| || || ||||||||||
Sbjct 314179 TGTTGTTCAAGTGAGAGAATAACAAACAAGCGAAATCAGTATGCAGACCTTCATCTCTAC 314120
Query 13694 TAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATA 13753
|| | |||||| || || || || ||||||||||| |||| || || ||||| || |
Sbjct 314119 AGATCAATTCGTTAGAGAAAGTCAAACCTGGCATCAAACCTCTCTTCTTCAACCAGAAGA 314060
Query 13754 TTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAGTCGTT 13813
| ||||| || || || || ||||| || |||||||| |||||||| || | | || ||
Sbjct 314059 TGGCAGCAAAAGAACCAGAGAAGAAAATACCCTCAACAGCAGCAAAGGCAACCAATCTTT 314000
Query 13814 CTCCAAACGATGCTTTTTTGTTTGATATCCATTTTCTAGCCCATTCAGAtttttttttAA 13873
| |||||| | || |||| | || |||||| | |||||| || | ||||| | | |
Sbjct 313999 CACCAAACAAAGCATTTTCATCAGAAATCCATCTCAAAGCCCAGTCCGCTTTTTCTCTGA 313940
Query 13874 TAAAATCCATTGTT-TCGATTGCATTGAATAAATGTTC--CTTCTCTTTAG-TACTTGAA 13929
|| | | | ||| || || ||||||||||| || |||| |||| | | |||||
Sbjct 313939 TACA-TGGAACGTTATCAATAGCATTGAATAAGAAATCAGCTTC-CTTTGGATCCTTGAC 313882
Query 13930 ATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCTATAGCTATCTGA 13989
| || || ||||| | || || |||||||||| |||||||| || || ||
Sbjct 313881 A--TAAGTGTCAATCAATAGAGAGTAAGTTTCAGAGTGGATGTTTTCCATCATGATTTGG 313824
Query 13990 AAACCATAAAAACATCTAGCTTCTGACCATTGTACCTCCGAGTAAAATCTTTCTGCCAAG 14049
||||| || ||||| ||||||| | ||| || || | | || |||| |||||
Sbjct 313823 AAACCGTAGAAACACTTAGCTTCAGGAACTTGAACTTCAGCAGAGAAGTTTTCAACCAAG 313764
Query 14050 TTTTCATTAACAATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTAT 14109
|||||||| ||||||||||| ||| ||||| || ||||| | | || || |||
Sbjct 313763 TTTTCATTGACAATACCATCGGAAGCAGCAAAGAAAGCCAAAACTCTAGACATGAAATAT 313704
Query 14110 TGCTCTTCATT---GTTGA---GTTTTTTCCAATCGGCTAAATCCTTAGAAAGATCTACT 14163
|| |||||| || | || ||||| || | ||||||||||| | ||| |
Sbjct 313703 --CT-TTCATTAGCATTCAACTTGTTGTTCCAGTCATCCAAATCCTTAGACAAATCAATC 313647
Query 14164 TCATCAACTGTCCAAAAACTAGCGACAGCTTTTTTATACATTACCCATATTTCTTTATAT 14223
|| ||| | ||||| ||| ||| | || || |||||| ||| ||||| | ||
Sbjct 313646 TCTTCAGCAGTCCAGAAAGAAGCTTCTTGCTTCTTGTACATTTGCCAGATTTCATGGTAC 313587
Query 14224 AATATAGGAAAAACTACAAATCTT 14247
|| || || | |||||||||
Sbjct 313586 TTGATTGGGAACAAAACAAATCTT 313563
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478588094081520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |