Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ambrosiozyma_20monospora_20[genbank_20GCA_5F001599995.1_202016-03- 01] 118 sequences; 24,978,438 total letters Query= NC_004062.1 Length=119217 Score E Sequences producing significant alignments: (Bits) Value seq3 113 3e-20 seq17 95.1 9e-15 >seq3 Length=1000385 Score = 113 bits (124), Expect = 3e-20 Identities = 164/232 (71%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942 || || | || ||| || ||||| || | |||| |||||||| | ||||| |||||| Sbjct 936294 CCACCTCTCAATCTCAAAACCAAGTGCAAAGTGGATTCCTTTTGAATGTTGTAGTCGGAC 936353 Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002 || || | |||| |||||||| || |||||||| ||||||| |||||||| | || Sbjct 936354 AAGGTTCTACCGTCTTCCAATTGCTTACCGGCAAAGATCAATCTTTGTTGATCAGGTGGG 936413 Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062 | |||||| || || |||| ||||| || ||| |||||| || || || Sbjct 936414 ATACCTTCCTTATCTTGGATCTTGGACTTGACATTGTCAATGGTGTCGGAAGATTCAACT 936473 Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCATTTTCT 43114 || | || || || || || || | || || ||||||||||||||| ||| Sbjct 936474 TCCAAGGTAATTGTCTTACCAGTCAAGGTCTTAACAAAAATTTGCATTGTCT 936525 >seq17 Length=626534 Score = 95.1 bits (104), Expect = 9e-15 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942 || || | || ||| || ||||| || | |||| |||||||| | ||||| || ||| Sbjct 620750 CCACCTCTCAATCTCAAAACCAAGTGAAGAGTGGATTCCTTTTGAATGTTGTAGTCAGAC 620809 Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002 || || | | || |||||||| || || ||||||||||||| ||||| || | || Sbjct 620810 AAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAAATCAATCTTTGTTGGTCAGGTGGG 620869 Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062 | |||||| || || |||| ||||| || ||| ||||| | ||||| Sbjct 620870 ATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAGGATTCGACC 620929 Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCATTTT 43112 || | || || || || || || || || || |||||||||||||| || Sbjct 620930 TCCAAAGTGATGGTCTTACCTGTAAGGGTCTTAACAAAAATTTGCATCTT 620979 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381369051542844