Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ambrosiozyma_20monospora_20[genbank_20GCA_5F001599995.1_202016-03-
01] 118 sequences; 24,978,438 total letters
Query= NC_004117.1
Length=158482
Score E
Sequences producing significant alignments: (Bits) Value
seq12 96.9 4e-15
seq40 82.4 8e-11
>seq12
Length=722896
Score = 96.9 bits (106), Expect = 4e-15
Identities = 349/529 (66%), Gaps = 24/529 (5%)
Strand=Plus/Plus
Query 50324 TACTCAACGCTTTCGATAATATTTCGTGTGTGCGTAAAAAGGACGATTGGGCATTGAAAT 50383
|| |||| ||| | ||||| || | ||| | | |||| | || ||||| |||| ||
Sbjct 313910 TATTCAATGCTATTGATAACGTTCCATGTATCAGAGAAAAAGCGGACTGGGCTTTGAGAT 313969
Query 50384 GGACTaaaaacaaaaaa-CTTACTTTGGCCGAACGTTTAGTGGCGTTTGCCATAGTTGAA 50442
||| | | |||| ||| ||||| ||| | || || || ||||| |||||
Sbjct 313970 GGATTTCTGATGAAAATGCTTTGTTTGGT-GAAAGATTGGTTGCCTTTGCTGCTGTTGAG 314028
Query 50443 GGTGTGtttttttCCGGTAGCTTTGCAGCCATATTTTACATTAAAACCTTAGGCATAATG 50502
||| | || || || ||| ||||| ||||| || | | || | ||| | |||
Sbjct 314029 GGTATTTTCTTCTCTGGTTCTTTTGCTGCCATCTTCTGGTTGAAGAAGAGAGGTTTGATG 314088
Query 50503 CCCGGCCTCACGTTTAGCAACGAGTTGATTTCGCGCGACGAAGGAATGCACACAGACTTT 50562
|| || | || || ||||| ||||| | | || ||||| |||| || || ||
Sbjct 314089 CCAGGTTTGACTTTCTCTAACGAATTGATCTGTAGAGATGAAGGTCTGCATACTGATTTC 314148
Query 50563 GCGTGTTTGTACTACAATACGCGCGTAAATGAAAAATTATC-ATACGAAACAATTTTGGA 50621
|| ||||||| || | | | | |||| || | | | ||| |||| | |
Sbjct 314149 GCTTGTTTGTT-----ATTCTCTC--ACTTGAACAACACCCCAGATGAAGAAATTGTTGC 314201
Query 50622 CATGTT---CAAAGAAGCCGTCGACATCGAAAAAGAGTTT-TTCACGGACGCTTTACCCG 50677
|| | | || |||||||| ||||| ||||| ||| | ||||| || ||||| || |
Sbjct 314202 CAAGATTATCACTGAAGCCGTTGACATTGAAAA-GAGATACTTCACTGATGCTTTGCCAG 314260
Query 50678 TGGCATTGTTGGGCATGAACGCAGACATGATGTGCGAGTACATTGAGTTTGTTGCAGACA 50737
| |||||||| |||||| ||| ||||||| | ||| |||| |||||||| ||||
Sbjct 314261 TCAAGTTGTTGGGTATGAACTGTGACTTGATGTGTCAATACGTTGAATTTGTTGCTGACA 314320
Query 50738 GATTGTT-GTTGCAGCTGGGA--CAACCGAAATACTATAATG-CACGTAACCCCTTTCCG 50793
||||||| ||||| ||||| ||| ||| ||| || | ||| ||||| ||
Sbjct 314321 GATTGTTGGTTGC-TTTGGGATGCAA--GAAGATCTACAACGTCAC-AAACCCATTCGAC 314376
Query 50794 TTTATGAATAACATATCGTTGGAGGGCAAAACAAACTTTTTCGA-AAGA 50841
|| ||| | || || || |||| || || || ||||| ||||| ||||
Sbjct 314377 TTCATGGAAAATATTTCCTTGGCTGGTAAGACTAACTTCTTCGAGAAGA 314425
>seq40
Length=167105
Score = 82.4 bits (90), Expect = 8e-11
Identities = 146/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 142973 AAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCT 143032
||||| || |||| || ||||| ||||| |||||||| || || || || |||
Sbjct 19975 AAAACCAAGTGAAGAGTTGATTCCTTTTGGATGTTGTAGTCAGACAARGTTCTACCATCT 19916
Query 143033 TCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCG 143092
|| | ||| |||||||| | || | | || ||||| || || || || || || ||
Sbjct 19915 TCTAATTGCTTACCAGCGAAAATTAATCTCTGTTGATCAGGTGGAATACCCTCCTTATCT 19856
Query 143093 GTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTC 143152
|| ||| ||| | | || | ||||| | | ||| ||||| | ||| | |||
Sbjct 19855 TGGATCTTTGATTTAACGTTATCAATGGTGTCAGATGATTCAACTTCCAAAGTGATAGTC 19796
Query 143153 TTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185
|| || ||||||||||| || || |||||||||
Sbjct 19795 TTACCAGTCAATGTTTTAACAAAGATTTGCATA 19763
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 507013652153760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |