Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ambrosiozyma_20monospora_20[genbank_20GCA_5F001599995.1_202016-03-
01] 118 sequences; 24,978,438 total letters
Query= NC_005179.1
Length=134721
Score E
Sequences producing significant alignments: (Bits) Value
seq12 242 3e-59
>seq12
Length=722896
Score = 242 bits (268), Expect = 3e-59
Identities = 607/918 (66%), Gaps = 17/918 (2%)
Strand=Plus/Minus
Query 12832 ATCGTCCTTATTTGACATAACAGACATTTTTTGATATTCGCTAACTCTTTTTTCAAAAAA 12891
||| ||||| || | ||||||| |||||||| || |||||| || || || ||
Sbjct 314472 ATCCTCCTTCTTAGCCATAACACCAGCCTTTTGATAGTCAGAAACTCTCTTCTCGAAGAA 314413
Query 12892 GTTTGTTTTTCCTTCTAACGAAATATTTTCCATAAAATCGAAAGGATTTTTCGAACAATA 12951
||| || || || | || |||||||||||||| || ||||| || ||| | ||
Sbjct 314412 GTTAGTCTTACCAGCCAAGGAAATATTTTCCATGAAGTCGAATGGGTTTGTGACGTTGTA 314353
Query 12952 GTATTTTTTACACCCTAATTCTAGTAACAATCTGTCAGCAACAAACTCTATGTACTGTTT 13011
| || || || || || | | |||||||||||||||||||| || | ||| ||
Sbjct 314352 GATCTTCTTGCATCCCAAAGCAACCAACAATCTGTCAGCAACAAATTCAACGTATTGACA 314293
Query 13012 CATTAAATCACAGTTCATTCCTATTAATTTTACAGGCATAGCTTCTGTTAAAAAGttttt 13071
||| || ||||||||||| || | || || || |||| ||| || || || | | ||
Sbjct 314292 CATCAAGTCACAGTTCATACCCAACAACTTGACTGGCAAAGCATCAGTGAAGTATCTCTT 314233
Query 13072 ttCTATATCAACTGCTTC---GATAACTATGTCTCTTATTACGTTCTCTAATGGAGGATT 13128
||| || ||||| ||||| ||||| || | ||| | | ||| | || |
Sbjct 314232 TTCAATGTCAACGGCTTCAGTGATAATCTTGGCAACAATTTCTTCATCT----GGGGTGT 314177
Query 13129 TGATAGA-TGCTTAAACATCATACATGCAAAATCACAGTGCAATCCTTCATCTCTACTTA 13187
|| | | || || | || ||| || |||||| |||| ||||||||||||| |
Sbjct 314176 TGTTCAAGTGAGAGAATAACAAACAAGCGAAATCAGTATGCAGACCTTCATCTCTACAGA 314117
Query 13188 TTAGCTCGTTTGAAAATGTTAGACCCGGCATAAGCCCTCGTTTTTTAATCCAAAATATAG 13247
| | ||||| || || || | ||| ||||| | |||| || || | ||| || || |
Sbjct 314116 TCAATTCGTTAGAGAAAGTCAAACCTGGCATCAAACCTCTCTTCTTCAACCAGAAGATGG 314057
Query 13248 CAGCAAACGAACCCGaaaaaaaTATTCCTTCAACTGCTGCAAACGCTATCAACCTTTCAC 13307
||||||| ||||| || || || || || ||||| || ||||| || | ||| |||||||
Sbjct 314056 CAGCAAAAGAACCAGAGAAGAAAATACCCTCAACAGCAGCAAAGGCAACCAATCTTTCAC 313997
Query 13308 CATACGTACTATTTTTACTCTCTATCCACTTTCTGGCCCAGTTTGCTTTTTGTTTAACGC 13367
|| || | ||||| | ||||| | ||||||| ||||||| | | | |
Sbjct 313996 CAAACAAAGCATTTTCATCAGAAATCCATCTCAAAGCCCAGTCCGCTTTTTCTCTGATAC 313937
Query 13368 AGTTCATATTTTCTATTGCGTTAAATAAATAAtttttttCCTTACTGTCTAAAATATAAG 13427
| | || || || || || ||||| ||| |||||| || | |||||
Sbjct 313936 ATGGAACGTTATCAATAGCATTGAATAAGAAATCAGCTTCCTTTGGATCCTTGACATAAG 313877
Query 13428 TATCTATCAATAAGCTATACATTTCTGAATGAATATTTTCCATCGCTATTTGGAAACCAT 13487
| || ||||||| || |||| || || || ||||||||| ||||||||||| |
Sbjct 313876 TGTCAATCAATAGAGAGTAAGTTTCAGAGTGGATGTTTTCCATCATGATTTGGAAACCGT 313817
Query 13488 AAAAACATCTAGCCTCTGATACCTGAACTTCGGAGTAAAATCTTTCTGCTAAGTTTTCGT 13547
| ||||| |||| || | || |||||||| | | || |||| | |||||||| |
Sbjct 313816 AGAAACACTTAGCTTCAGGAACTTGAACTTCAGCAGAGAAGTTTTCAACCAAGTTTTCAT 313757
Query 13548 TAACTATCCCGTCACTAGCAGCaaaaaaaGC---AAGTATGTGCTTAATAAAtttttttt 13604
| || || || || ||||||||| ||||| || | | | || || | | |||
Sbjct 313756 TGACAATACCATCGGAAGCAGCAAAGAAAGCCAAAACTCTAGAC---ATGAAATATCTTT 313700
Query 13605 CGTTTTCTGACAAC---TTTAACCAATCTGGAAAATCTTTTGATAAATCTACCTCCTCAA 13661
| || | |||| || ||| || ||||| || || ||||| | ||| |||
Sbjct 313699 CATTAGCATTCAACTTGTTGTTCCAGTCATCCAAATCCTTAGACAAATCAATCTCTTCAG 313640
Query 13662 CGGTCCAAAAAGAAGCAACAGCCTTCTTATACATCATCCATATATCCTTATAAACAATGG 13721
| ||||| |||||||| | |||||| ||||| ||| || || | || || |
Sbjct 313639 CAGTCCAGAAAGAAGCTTCTTGCTTCTTGTACATTTGCCAGATTTCATGGTACTTGATTG 313580
Query 13722 GAAACACAACGTATCTTC 13739
| |||| ||| ||||||
Sbjct 313579 GGAACAAAACAAATCTTC 313562
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 430981780193436
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |