Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ambrosiozyma_20monospora_20[genbank_20GCA_5F001599995.1_202016-03- 01] 118 sequences; 24,978,438 total letters Query= NC_005179.1 Length=134721 Score E Sequences producing significant alignments: (Bits) Value seq12 242 3e-59 >seq12 Length=722896 Score = 242 bits (268), Expect = 3e-59 Identities = 607/918 (66%), Gaps = 17/918 (2%) Strand=Plus/Minus Query 12832 ATCGTCCTTATTTGACATAACAGACATTTTTTGATATTCGCTAACTCTTTTTTCAAAAAA 12891 ||| ||||| || | ||||||| |||||||| || |||||| || || || || Sbjct 314472 ATCCTCCTTCTTAGCCATAACACCAGCCTTTTGATAGTCAGAAACTCTCTTCTCGAAGAA 314413 Query 12892 GTTTGTTTTTCCTTCTAACGAAATATTTTCCATAAAATCGAAAGGATTTTTCGAACAATA 12951 ||| || || || | || |||||||||||||| || ||||| || ||| | || Sbjct 314412 GTTAGTCTTACCAGCCAAGGAAATATTTTCCATGAAGTCGAATGGGTTTGTGACGTTGTA 314353 Query 12952 GTATTTTTTACACCCTAATTCTAGTAACAATCTGTCAGCAACAAACTCTATGTACTGTTT 13011 | || || || || || | | |||||||||||||||||||| || | ||| || Sbjct 314352 GATCTTCTTGCATCCCAAAGCAACCAACAATCTGTCAGCAACAAATTCAACGTATTGACA 314293 Query 13012 CATTAAATCACAGTTCATTCCTATTAATTTTACAGGCATAGCTTCTGTTAAAAAGttttt 13071 ||| || ||||||||||| || | || || || |||| ||| || || || | | || Sbjct 314292 CATCAAGTCACAGTTCATACCCAACAACTTGACTGGCAAAGCATCAGTGAAGTATCTCTT 314233 Query 13072 ttCTATATCAACTGCTTC---GATAACTATGTCTCTTATTACGTTCTCTAATGGAGGATT 13128 ||| || ||||| ||||| ||||| || | ||| | | ||| | || | Sbjct 314232 TTCAATGTCAACGGCTTCAGTGATAATCTTGGCAACAATTTCTTCATCT----GGGGTGT 314177 Query 13129 TGATAGA-TGCTTAAACATCATACATGCAAAATCACAGTGCAATCCTTCATCTCTACTTA 13187 || | | || || | || ||| || |||||| |||| ||||||||||||| | Sbjct 314176 TGTTCAAGTGAGAGAATAACAAACAAGCGAAATCAGTATGCAGACCTTCATCTCTACAGA 314117 Query 13188 TTAGCTCGTTTGAAAATGTTAGACCCGGCATAAGCCCTCGTTTTTTAATCCAAAATATAG 13247 | | ||||| || || || | ||| ||||| | |||| || || | ||| || || | Sbjct 314116 TCAATTCGTTAGAGAAAGTCAAACCTGGCATCAAACCTCTCTTCTTCAACCAGAAGATGG 314057 Query 13248 CAGCAAACGAACCCGaaaaaaaTATTCCTTCAACTGCTGCAAACGCTATCAACCTTTCAC 13307 ||||||| ||||| || || || || || ||||| || ||||| || | ||| ||||||| Sbjct 314056 CAGCAAAAGAACCAGAGAAGAAAATACCCTCAACAGCAGCAAAGGCAACCAATCTTTCAC 313997 Query 13308 CATACGTACTATTTTTACTCTCTATCCACTTTCTGGCCCAGTTTGCTTTTTGTTTAACGC 13367 || || | ||||| | ||||| | ||||||| ||||||| | | | | Sbjct 313996 CAAACAAAGCATTTTCATCAGAAATCCATCTCAAAGCCCAGTCCGCTTTTTCTCTGATAC 313937 Query 13368 AGTTCATATTTTCTATTGCGTTAAATAAATAAtttttttCCTTACTGTCTAAAATATAAG 13427 | | || || || || || ||||| ||| |||||| || | ||||| Sbjct 313936 ATGGAACGTTATCAATAGCATTGAATAAGAAATCAGCTTCCTTTGGATCCTTGACATAAG 313877 Query 13428 TATCTATCAATAAGCTATACATTTCTGAATGAATATTTTCCATCGCTATTTGGAAACCAT 13487 | || ||||||| || |||| || || || ||||||||| ||||||||||| | Sbjct 313876 TGTCAATCAATAGAGAGTAAGTTTCAGAGTGGATGTTTTCCATCATGATTTGGAAACCGT 313817 Query 13488 AAAAACATCTAGCCTCTGATACCTGAACTTCGGAGTAAAATCTTTCTGCTAAGTTTTCGT 13547 | ||||| |||| || | || |||||||| | | || |||| | |||||||| | Sbjct 313816 AGAAACACTTAGCTTCAGGAACTTGAACTTCAGCAGAGAAGTTTTCAACCAAGTTTTCAT 313757 Query 13548 TAACTATCCCGTCACTAGCAGCaaaaaaaGC---AAGTATGTGCTTAATAAAtttttttt 13604 | || || || || ||||||||| ||||| || | | | || || | | ||| Sbjct 313756 TGACAATACCATCGGAAGCAGCAAAGAAAGCCAAAACTCTAGAC---ATGAAATATCTTT 313700 Query 13605 CGTTTTCTGACAAC---TTTAACCAATCTGGAAAATCTTTTGATAAATCTACCTCCTCAA 13661 | || | |||| || ||| || ||||| || || ||||| | ||| ||| Sbjct 313699 CATTAGCATTCAACTTGTTGTTCCAGTCATCCAAATCCTTAGACAAATCAATCTCTTCAG 313640 Query 13662 CGGTCCAAAAAGAAGCAACAGCCTTCTTATACATCATCCATATATCCTTATAAACAATGG 13721 | ||||| |||||||| | |||||| ||||| ||| || || | || || | Sbjct 313639 CAGTCCAGAAAGAAGCTTCTTGCTTCTTGTACATTTGCCAGATTTCATGGTACTTGATTG 313580 Query 13722 GAAACACAACGTATCTTC 13739 | |||| ||| |||||| Sbjct 313579 GGAACAAAACAAATCTTC 313562 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430981780193436