Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ambrosiozyma_20monospora_20[genbank_20GCA_5F001599995.1_202016-03-
01] 118 sequences; 24,978,438 total letters
Query= NC_005902.1
Length=186250
Score E
Sequences producing significant alignments: (Bits) Value
seq20 210 3e-49
seq13 170 2e-37
seq8 89.7 6e-13
>seq20
Length=536142
Score = 210 bits (232), Expect = 3e-49
Identities = 427/628 (68%), Gaps = 37/628 (6%)
Strand=Plus/Plus
Query 6712 TAATCTAACAATTCAAAATCTTCAAATTTAAAATCACATAAATTATCAG--ACttttttt 6769
||||| | || ||| ||||||||||||||||||||| | |||||| || ||| |
Sbjct 409571 TAATCCACCACTTCGAAATCTTCAAATTTAAAATCATCGA---TATCAGTGACCTTTCTA 409627
Query 6770 ttAATATTACAACAGGTGAAGG-TTTTATTGATCGAGTTAATTGTTCTTTTATAGCTTTT 6828
|| || ||| | ||| |||| | || || | ||||||||| | ||| |
Sbjct 409628 TTGATCTTAAGTTTTGGGAAATCTTTTGGAGTTCTAGAAATTTGTTCTTTCAAAGCATCG 409687
Query 6829 ATATGATCTAAATAAATATGAGCATCTCCTAGCGTATGAATAAATTCACCTGGTTTCATA 6888
| |||||| | |||| |||| || || | ||||| || |||||||| |||| ||||
Sbjct 409688 ACATGATCACAGTAAACGTGAGAGTCACCCATGGTATGTATGAATTCACCAGGTTCCATA 409747
Query 6889 TCAACAGCTTGAGCAATTAAATATGTTAATAATGCATAAGAAGCTACATTAAAAGGTACA 6948
||||| | |||||||| | ||| || || || ||||||||||| | ||| ||||| |||
Sbjct 409748 TCAACGACATGAGCAATCATATAAGTCAACAAAGCATAAGAAGCGATATTGAAAGGAACA 409807
Query 6949 CCTAATCCCATATCTGCTGATCTTTGATAACATTGACAAGATAAAATATTG--------T 7000
|| | |||||||| ||||||||||| |||||| | ||| ||| |
Sbjct 409808 CCAAGACCCATATCACAAGATCTTTGATACATTTGACA--ACTCAATCTTGGTTTACCTT 409865
Query 7001 CTATAG---------CATAAAATTGACACAATACATGACATGGAGGTAAAACAGCCTGAT 7051
|| | | ||||||||||||| || |||||||||||||| || ||| ||
Sbjct 409866 CTTTTGGGAAATTCACATAAAATTGACAAAAGACATGACATGGAGGCAA---TGCCATAT 409922
Query 7052 CT---ATATCAGATGGATTCCAAGCAGTCATTAAAATACGTCTATCATTTGGATTTGTTT 7108
|| | | | | ||| |||||||| | ||| | || | |||||||| |||| ||||||
Sbjct 409923 CTTTGAAAGCTGGTGGGTTCCAAGCTGACATAATGATTCTTCTATCATATGGA-TTGTTT 409981
Query 7109 TTAATTTTGTTATAATTATTTG---TAATTGATCTATACCCTGACCTTCATAATTAGTAT 7165
|| | ||| | || | ||| | |||||| | ||| || ||| || | | ||
Sbjct 409982 TTCA--ATGTATTGATGACTTGAGCGAGTTGATCAAAACCTTGTCCTGTGTAGTCTGCAT 410039
Query 7166 GACAATTTATATAATTAGCTCCAAAATGTCTCCATTGAAACCCATAAATAGGACCTAAAT 7225
||| | | || | || || |||||||||||||| || ||||| | |||||||| |
Sbjct 410040 CACAGTCCTTGTATTCCGCACCGAAATGTCTCCATTGGAATCCATACACTGGACCTAAGT 410099
Query 7226 CACCTTCTTCACGATGATTAAATCCTAATCGATTTAAATTAGATTTTGATCCATAAGCAT 7285
|||||||| | ||| | |||||||| || || | | ||||||||| | | |
Sbjct 410100 CACCTTCTCTTCTGTGAGTTAATCCTAAGGAATCCAAGTACTCTCTTGATCCATTACCTT 410159
Query 7286 CCCAAATATGTACAGAtttttttGATAA 7313
||||||| | ||| ||| ||||||
Sbjct 410160 CCCAAATTTTAACACCTTTGGCTGATAA 410187
>seq13
Length=713860
Score = 170 bits (188), Expect = 2e-37
Identities = 377/554 (68%), Gaps = 30/554 (5%)
Strand=Plus/Plus
Query 164398 AATTTTGAAGAAATGGGAGTAGGTGGACTAGATCGAGAATTTTCTCTTATTTTCAGACGA 164457
|| || ||||| ||||| | ||||| | ||| |||||| | |||||||||| ||
Sbjct 650165 AAATTCGAAGATATGGGTATTGGTGGTTTGGATAAAGAATTCACATCTATTTTCAGAAGA 650224
Query 164458 GCATTTGCTTCTAGATCAGTTCCTATC-GAAATAATaaaaaaaTTAGGCTGTAAACATAT 164516
|| |||||||| ||| |||| | | | | || | ||||| || | |||| |
Sbjct 650225 GCGTTTGCTTCAAGAATT-TTCCCACCTGCCTTGATTGAGAAATTGGGTATTCAACACGT 650283
Query 164517 AAAAGGAATTTTATTACATGGACCTCCTGGTTGCGGTAAAACATTAATGGCTCGATGCAT 164576
|| || || | ||| |||| ||||| ||| |||||| || || || ||| || ||
Sbjct 650284 TAAGGGTATGCTGTTATATGGTCCTCCAGGTACCGGTAAGACCTTGATTGCTAGACAAAT 650343
Query 164577 TGCTCAAGCTTTTAAATCGC----GACCCGTTAAAATTGTTAATGGTCCTGAATTATTGA 164632
|| | ||| | || || ||| || || || |||||||||||||| || | |||
Sbjct 650344 TGGT-AAGATGTTGAA-CGCAAGAGAGCCA--AAGATTGTTAATGGTCCAGATATGTTGT 650399
Query 164633 ACAAATATGTAGGTGAGTCAGAAGCTAATGTTAGAAAGTTGTTTCAGGAGGCTGAAGA-- 164690
|| ||||| ||||| || |||| ||| || | ||| | || || || ||||||||
Sbjct 650400 CTAAGTATGTTGGTGAATCCGAAGGTAACATTCGTAAGCTTTTCCAAGATGCTGAAGACG 650459
Query 164691 AGAACAAAAGAAAGCAGGTTTAGCTAGTAA--ATTACATGTTATTGTTTTTGATGAGATA 164748
|| |||||| || |||| || | | | | ||||| ||||| | |||||||| ||
Sbjct 650460 AGTACAAAAAGAA--AGGTGAAG--AATCATCACTACATATTATTATCTTTGATGAATTA 650515
Query 164749 GATGCTCTTTGCAAAAAACGTGGT--GA----TAATATTATTCATGATGCAG------TG 164796
||| || ||| |||| || | ||| || | || || | || || | ||
Sbjct 650516 GATTCTGTTTTCAAACAAAGAGGTTCGAAGTCTGATGGTACTGGTGTCGCTGATAACTTG 650575
Query 164797 GTTAATCAGTTGCTTTCTAAAATAGATGGTGTAGAATCCTTAAATAATATTTTAATTGTA 164856
|| ||||| ||| | | || || |||||||| || || ||||||||||| || |
Sbjct 650576 GTCAATCAATTGTTGGCCAAGATGGATGGTGTGGAGCAATTGAATAATATTTTGGTTATC 650635
Query 164857 GGTATGACCAACCGACCTGATTTAATTGATGATGCTTTATTACGACCTGGTCGATTAGAA 164916
|||||||||||| || ||||| || ||| ||||||||||| |||| ||| |||| |||
Sbjct 650636 GGTATGACCAACAGAAAAGATTTGATCGATAATGCTTTATTAAGACCAGGTAGATTTGAA 650695
Query 164917 TTGAAAATAGAAAT 164930
| || | |||||
Sbjct 650696 GTCCAAGTTGAAAT 650709
>seq8
Length=779646
Score = 89.7 bits (98), Expect = 6e-13
Identities = 105/142 (74%), Gaps = 0/142 (0%)
Strand=Plus/Minus
Query 19362 AAATAGGTGATAAGTTTGCTTCTTTTACTGCTCAAAAAGGCACATGTGGTATGATTTATC 19421
|||| |||||||||||||||||| | |||||| || || ||||| | ||||
Sbjct 173064 AAATTGGTGATAAGTTTGCTTCTAGACACGGTCAAAAGGGTACCGTCGGTATTACTTATA 173005
Query 19422 GTCAAGAAGATATGCCTTTTACTAAAGATGGTATAGTGCCGGATCTTATTATTAACCCAC 19481
| || ||||||||||| |||||| | | ||||| || || ||| | ||||| ||||| |
Sbjct 173004 GACACGAAGATATGCCATTTACTGCACAAGGTATTGTTCCTGATTTGATTATCAACCCTC 172945
Query 19482 ATGCTTTTCCAAGTCGAATGAC 19503
| ||| |||| ||| |||||
Sbjct 172944 ACGCTATTCCTTCTCGTATGAC 172923
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 595871121088800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |