Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ambrosiozyma_20monospora_20[genbank_20GCA_5F001599995.1_202016-03- 01] 118 sequences; 24,978,438 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq20 210 3e-49 seq13 170 2e-37 seq8 89.7 6e-13 >seq20 Length=536142 Score = 210 bits (232), Expect = 3e-49 Identities = 427/628 (68%), Gaps = 37/628 (6%) Strand=Plus/Plus Query 6712 TAATCTAACAATTCAAAATCTTCAAATTTAAAATCACATAAATTATCAG--ACttttttt 6769 ||||| | || ||| ||||||||||||||||||||| | |||||| || ||| | Sbjct 409571 TAATCCACCACTTCGAAATCTTCAAATTTAAAATCATCGA---TATCAGTGACCTTTCTA 409627 Query 6770 ttAATATTACAACAGGTGAAGG-TTTTATTGATCGAGTTAATTGTTCTTTTATAGCTTTT 6828 || || ||| | ||| |||| | || || | ||||||||| | ||| | Sbjct 409628 TTGATCTTAAGTTTTGGGAAATCTTTTGGAGTTCTAGAAATTTGTTCTTTCAAAGCATCG 409687 Query 6829 ATATGATCTAAATAAATATGAGCATCTCCTAGCGTATGAATAAATTCACCTGGTTTCATA 6888 | |||||| | |||| |||| || || | ||||| || |||||||| |||| |||| Sbjct 409688 ACATGATCACAGTAAACGTGAGAGTCACCCATGGTATGTATGAATTCACCAGGTTCCATA 409747 Query 6889 TCAACAGCTTGAGCAATTAAATATGTTAATAATGCATAAGAAGCTACATTAAAAGGTACA 6948 ||||| | |||||||| | ||| || || || ||||||||||| | ||| ||||| ||| Sbjct 409748 TCAACGACATGAGCAATCATATAAGTCAACAAAGCATAAGAAGCGATATTGAAAGGAACA 409807 Query 6949 CCTAATCCCATATCTGCTGATCTTTGATAACATTGACAAGATAAAATATTG--------T 7000 || | |||||||| ||||||||||| |||||| | ||| ||| | Sbjct 409808 CCAAGACCCATATCACAAGATCTTTGATACATTTGACA--ACTCAATCTTGGTTTACCTT 409865 Query 7001 CTATAG---------CATAAAATTGACACAATACATGACATGGAGGTAAAACAGCCTGAT 7051 || | | ||||||||||||| || |||||||||||||| || ||| || Sbjct 409866 CTTTTGGGAAATTCACATAAAATTGACAAAAGACATGACATGGAGGCAA---TGCCATAT 409922 Query 7052 CT---ATATCAGATGGATTCCAAGCAGTCATTAAAATACGTCTATCATTTGGATTTGTTT 7108 || | | | | ||| |||||||| | ||| | || | |||||||| |||| |||||| Sbjct 409923 CTTTGAAAGCTGGTGGGTTCCAAGCTGACATAATGATTCTTCTATCATATGGA-TTGTTT 409981 Query 7109 TTAATTTTGTTATAATTATTTG---TAATTGATCTATACCCTGACCTTCATAATTAGTAT 7165 || | ||| | || | ||| | |||||| | ||| || ||| || | | || Sbjct 409982 TTCA--ATGTATTGATGACTTGAGCGAGTTGATCAAAACCTTGTCCTGTGTAGTCTGCAT 410039 Query 7166 GACAATTTATATAATTAGCTCCAAAATGTCTCCATTGAAACCCATAAATAGGACCTAAAT 7225 ||| | | || | || || |||||||||||||| || ||||| | |||||||| | Sbjct 410040 CACAGTCCTTGTATTCCGCACCGAAATGTCTCCATTGGAATCCATACACTGGACCTAAGT 410099 Query 7226 CACCTTCTTCACGATGATTAAATCCTAATCGATTTAAATTAGATTTTGATCCATAAGCAT 7285 |||||||| | ||| | |||||||| || || | | ||||||||| | | | Sbjct 410100 CACCTTCTCTTCTGTGAGTTAATCCTAAGGAATCCAAGTACTCTCTTGATCCATTACCTT 410159 Query 7286 CCCAAATATGTACAGAtttttttGATAA 7313 ||||||| | ||| ||| |||||| Sbjct 410160 CCCAAATTTTAACACCTTTGGCTGATAA 410187 >seq13 Length=713860 Score = 170 bits (188), Expect = 2e-37 Identities = 377/554 (68%), Gaps = 30/554 (5%) Strand=Plus/Plus Query 164398 AATTTTGAAGAAATGGGAGTAGGTGGACTAGATCGAGAATTTTCTCTTATTTTCAGACGA 164457 || || ||||| ||||| | ||||| | ||| |||||| | |||||||||| || Sbjct 650165 AAATTCGAAGATATGGGTATTGGTGGTTTGGATAAAGAATTCACATCTATTTTCAGAAGA 650224 Query 164458 GCATTTGCTTCTAGATCAGTTCCTATC-GAAATAATaaaaaaaTTAGGCTGTAAACATAT 164516 || |||||||| ||| |||| | | | | || | ||||| || | |||| | Sbjct 650225 GCGTTTGCTTCAAGAATT-TTCCCACCTGCCTTGATTGAGAAATTGGGTATTCAACACGT 650283 Query 164517 AAAAGGAATTTTATTACATGGACCTCCTGGTTGCGGTAAAACATTAATGGCTCGATGCAT 164576 || || || | ||| |||| ||||| ||| |||||| || || || ||| || || Sbjct 650284 TAAGGGTATGCTGTTATATGGTCCTCCAGGTACCGGTAAGACCTTGATTGCTAGACAAAT 650343 Query 164577 TGCTCAAGCTTTTAAATCGC----GACCCGTTAAAATTGTTAATGGTCCTGAATTATTGA 164632 || | ||| | || || ||| || || || |||||||||||||| || | ||| Sbjct 650344 TGGT-AAGATGTTGAA-CGCAAGAGAGCCA--AAGATTGTTAATGGTCCAGATATGTTGT 650399 Query 164633 ACAAATATGTAGGTGAGTCAGAAGCTAATGTTAGAAAGTTGTTTCAGGAGGCTGAAGA-- 164690 || ||||| ||||| || |||| ||| || | ||| | || || || |||||||| Sbjct 650400 CTAAGTATGTTGGTGAATCCGAAGGTAACATTCGTAAGCTTTTCCAAGATGCTGAAGACG 650459 Query 164691 AGAACAAAAGAAAGCAGGTTTAGCTAGTAA--ATTACATGTTATTGTTTTTGATGAGATA 164748 || |||||| || |||| || | | | | ||||| ||||| | |||||||| || Sbjct 650460 AGTACAAAAAGAA--AGGTGAAG--AATCATCACTACATATTATTATCTTTGATGAATTA 650515 Query 164749 GATGCTCTTTGCAAAAAACGTGGT--GA----TAATATTATTCATGATGCAG------TG 164796 ||| || ||| |||| || | ||| || | || || | || || | || Sbjct 650516 GATTCTGTTTTCAAACAAAGAGGTTCGAAGTCTGATGGTACTGGTGTCGCTGATAACTTG 650575 Query 164797 GTTAATCAGTTGCTTTCTAAAATAGATGGTGTAGAATCCTTAAATAATATTTTAATTGTA 164856 || ||||| ||| | | || || |||||||| || || ||||||||||| || | Sbjct 650576 GTCAATCAATTGTTGGCCAAGATGGATGGTGTGGAGCAATTGAATAATATTTTGGTTATC 650635 Query 164857 GGTATGACCAACCGACCTGATTTAATTGATGATGCTTTATTACGACCTGGTCGATTAGAA 164916 |||||||||||| || ||||| || ||| ||||||||||| |||| ||| |||| ||| Sbjct 650636 GGTATGACCAACAGAAAAGATTTGATCGATAATGCTTTATTAAGACCAGGTAGATTTGAA 650695 Query 164917 TTGAAAATAGAAAT 164930 | || | ||||| Sbjct 650696 GTCCAAGTTGAAAT 650709 >seq8 Length=779646 Score = 89.7 bits (98), Expect = 6e-13 Identities = 105/142 (74%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 19362 AAATAGGTGATAAGTTTGCTTCTTTTACTGCTCAAAAAGGCACATGTGGTATGATTTATC 19421 |||| |||||||||||||||||| | |||||| || || ||||| | |||| Sbjct 173064 AAATTGGTGATAAGTTTGCTTCTAGACACGGTCAAAAGGGTACCGTCGGTATTACTTATA 173005 Query 19422 GTCAAGAAGATATGCCTTTTACTAAAGATGGTATAGTGCCGGATCTTATTATTAACCCAC 19481 | || ||||||||||| |||||| | | ||||| || || ||| | ||||| ||||| | Sbjct 173004 GACACGAAGATATGCCATTTACTGCACAAGGTATTGTTCCTGATTTGATTATCAACCCTC 172945 Query 19482 ATGCTTTTCCAAGTCGAATGAC 19503 | ||| |||| ||| ||||| Sbjct 172944 ACGCTATTCCTTCTCGTATGAC 172923 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595871121088800