Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ambrosiozyma_20monospora_20[genbank_20GCA_5F001599995.1_202016-03-
01] 118 sequences; 24,978,438 total letters
Query= NC_006549.1
Length=140131
Score E
Sequences producing significant alignments: (Bits) Value
seq17 127 2e-24
seq3 113 4e-20
seq40 96.9 3e-15
>seq17
Length=626534
Score = 127 bits (140), Expect = 2e-24
Identities = 168/232 (72%), Gaps = 1/232 (0%)
Strand=Plus/Plus
Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840
|| |||||||||| ||| |||||||| | ||| ||||||||||| | ||| || || |
Sbjct 620750 CCACCTCTCAATCTCAAAACCAAGTGAAGAGTGGATTCCTTTTGAATGTTGTAGTCAGAC 620809
Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900
| ||| | ||| |||| || || || |||| || |||||||| || || || ||
Sbjct 620810 AAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAAATCAATCTTTGTTGGTCAGGTGGG 620869
Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960
|||||||| ||||| | || || | |||||| | | | ||||||| | |||||
Sbjct 620870 ATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAGGATTCGACC 620929
Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGCTTA 95012
|| | |||||||| || || ||||| || || ||||| || ||||| ||||
Sbjct 620930 TCCAAAGTGATGGTCTTACCTGTAAGGGTCTTAACAAAAATTTGCAT-CTTA 620980
>seq3
Length=1000385
Score = 113 bits (124), Expect = 4e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840
|| |||||||||| ||| |||||||||||||| ||||||||||| | ||| || ||| |
Sbjct 936294 CCACCTCTCAATCTCAAAACCAAGTGCAAAGTGGATTCCTTTTGAATGTTGTAGTCGGAC 936353
Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900
| || | || |||| || || ||| ||||||| |||||||| ||||| || ||
Sbjct 936354 AAGGTTCTACCGTCTTCCAATTGCTTACCGGCAAAGATCAATCTTTGTTGATCAGGTGGG 936413
Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960
|||||||| || || | || || | |||||| | | | ||||| | || ||
Sbjct 936414 ATACCTTCCTTATCTTGGATCTTGGACTTGACATTGTCAATGGTGTCGGAAGATTCAACT 936473
Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| | || || || || ||||| | || || ||||| || |||||
Sbjct 936474 TCCAAGGTAATTGTCTTACCAGTCAAGGTCTTAACAAAAATTTGCAT 936520
>seq40
Length=167105
Score = 96.9 bits (106), Expect = 3e-15
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840
|| |||||||||| || |||||||| | ||| ||||||||||| | ||| || || |
Sbjct 19990 CCACCTCTCAATCTTAAAACCAAGTGAAGAGTTGATTCCTTTTGGATGTTGTAGTCAGAC 19931
Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900
| || | ||| || | || || || | || |||||||| || ||||| || |||
Sbjct 19930 AARGTTCTACCATCTTCTAATTGCTTACCAGCGAAAATTAATCTCTGTTGATCAGGTGGA 19871
Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960
||||| || || || | || |||| || ||| | | ||||||| || ||
Sbjct 19870 ATACCCTCCTTATCTTGGATCTTTGATTTAACGTTATCAATGGTGTCAGATGATTCAACT 19811
Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| | ||||| || || ||||| | ||||| |||||||| |||||
Sbjct 19810 TCCAAAGTGATAGTCTTACCAGTCAATGTTTTAACAAAGATTTGCAT 19764
Score = 82.4 bits (90), Expect = 7e-11
Identities = 113/160 (71%), Gaps = 0/160 (0%)
Strand=Plus/Minus
Query 94773 TTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTAT 94832
||| || || |||||||||| |||||||||||| | || ||||||||||| | ||| |
Sbjct 19770 TTTGCATACCACCTCTCAATCTCAACACCAAGTGAAGWGTTGATTCCTTTTGRATGTTGT 19711
Query 94833 AATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGAT 94892
| || || || | ||| || | || || || | || || |||||||| || |
Sbjct 19710 AGTCAGACAARGTTCTACCATCTTCTAATTGCTTACCAGCGAAAATCAATCTTTGTTGGT 19651
Query 94893 CTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGAC 94932
| || ||||||||||| || || | || || | ||| ||
Sbjct 19650 CAGGTGGAATACCTTCCTTATCTTGWATCTTGGACTTAAC 19611
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448290538770480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |