Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ambrosiozyma_20monospora_20[genbank_20GCA_5F001599995.1_202016-03- 01] 118 sequences; 24,978,438 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq17 127 2e-24 seq3 113 4e-20 seq40 96.9 3e-15 >seq17 Length=626534 Score = 127 bits (140), Expect = 2e-24 Identities = 168/232 (72%), Gaps = 1/232 (0%) Strand=Plus/Plus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || |||||||||| ||| |||||||| | ||| ||||||||||| | ||| || || | Sbjct 620750 CCACCTCTCAATCTCAAAACCAAGTGAAGAGTGGATTCCTTTTGAATGTTGTAGTCAGAC 620809 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | ||| | ||| |||| || || || |||| || |||||||| || || || || Sbjct 620810 AAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAAATCAATCTTTGTTGGTCAGGTGGG 620869 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 |||||||| ||||| | || || | |||||| | | | ||||||| | ||||| Sbjct 620870 ATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAGGATTCGACC 620929 Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGCTTA 95012 || | |||||||| || || ||||| || || ||||| || ||||| |||| Sbjct 620930 TCCAAAGTGATGGTCTTACCTGTAAGGGTCTTAACAAAAATTTGCAT-CTTA 620980 >seq3 Length=1000385 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || |||||||||| ||| |||||||||||||| ||||||||||| | ||| || ||| | Sbjct 936294 CCACCTCTCAATCTCAAAACCAAGTGCAAAGTGGATTCCTTTTGAATGTTGTAGTCGGAC 936353 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | || | || |||| || || ||| ||||||| |||||||| ||||| || || Sbjct 936354 AAGGTTCTACCGTCTTCCAATTGCTTACCGGCAAAGATCAATCTTTGTTGATCAGGTGGG 936413 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 |||||||| || || | || || | |||||| | | | ||||| | || || Sbjct 936414 ATACCTTCCTTATCTTGGATCTTGGACTTGACATTGTCAATGGTGTCGGAAGATTCAACT 936473 Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || | || || || || ||||| | || || ||||| || ||||| Sbjct 936474 TCCAAGGTAATTGTCTTACCAGTCAAGGTCTTAACAAAAATTTGCAT 936520 >seq40 Length=167105 Score = 96.9 bits (106), Expect = 3e-15 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || |||||||||| || |||||||| | ||| ||||||||||| | ||| || || | Sbjct 19990 CCACCTCTCAATCTTAAAACCAAGTGAAGAGTTGATTCCTTTTGGATGTTGTAGTCAGAC 19931 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | || | ||| || | || || || | || |||||||| || ||||| || ||| Sbjct 19930 AARGTTCTACCATCTTCTAATTGCTTACCAGCGAAAATTAATCTCTGTTGATCAGGTGGA 19871 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 ||||| || || || | || |||| || ||| | | ||||||| || || Sbjct 19870 ATACCCTCCTTATCTTGGATCTTTGATTTAACGTTATCAATGGTGTCAGATGATTCAACT 19811 Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || | ||||| || || ||||| | ||||| |||||||| ||||| Sbjct 19810 TCCAAAGTGATAGTCTTACCAGTCAATGTTTTAACAAAGATTTGCAT 19764 Score = 82.4 bits (90), Expect = 7e-11 Identities = 113/160 (71%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 94773 TTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTAT 94832 ||| || || |||||||||| |||||||||||| | || ||||||||||| | ||| | Sbjct 19770 TTTGCATACCACCTCTCAATCTCAACACCAAGTGAAGWGTTGATTCCTTTTGRATGTTGT 19711 Query 94833 AATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGAT 94892 | || || || | ||| || | || || || | || || |||||||| || | Sbjct 19710 AGTCAGACAARGTTCTACCATCTTCTAATTGCTTACCAGCGAAAATCAATCTTTGTTGGT 19651 Query 94893 CTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGAC 94932 | || ||||||||||| || || | || || | ||| || Sbjct 19650 CAGGTGGAATACCTTCCTTATCTTGWATCTTGGACTTAAC 19611 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448290538770480