Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ambrosiozyma_20monospora_20[genbank_20GCA_5F001599995.1_202016-03-
01] 118 sequences; 24,978,438 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq78 129 9e-26
seq13 118 2e-22
seq21 107 3e-19
>seq78
Length=10889
Score = 129 bits (142), Expect = 9e-26
Identities = 184/258 (71%), Gaps = 1/258 (0%)
Strand=Plus/Minus
Query 16448 AGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGT 16507
|||| |||| |||||||||| ||||| ||||| |||||||||||| | | | || |
Sbjct 10178 AGAT-TCTTAGAGATAACATTCAAGGTATCACAAAGCCAGCTATCAGAAGATTAGCCAGA 10120
Query 16508 CGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAG 16567
| ||||| || ||| | | || | ||| |||||||||| | | | ||| ||||||
Sbjct 10119 AGAGGTGGTGTTAAGAGAATTTCCGCTTTGATCTATGAAGAAGTCAGAGTTGTCTTGAAG 10060
Query 16568 ATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAG 16627
|||| | | | || ||| |||||| | |||||||||||||||||| | |||
Sbjct 10059 TCCTTCTTGGAAAATGTCATCAGAGATGCTGTTACCTATACCGAGCACGCTAAGAGAAAG 10000
Query 16628 ACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGT 16687
|||||||| || ||||| | || ||||| ||||| | ||||| | | | ||||||
Sbjct 9999 ACTGTCACTTCTTTGGATGTTGTTTATGCCTTGAAGAGACAAGGTAGAACCTTGTATGGT 9940
Query 16688 TTTGGAAGTTAATCTTCT 16705
|| || ||||| | |||
Sbjct 9939 TTCGGTGGTTAAACATCT 9922
>seq13
Length=713860
Score = 118 bits (130), Expect = 2e-22
Identities = 178/252 (71%), Gaps = 1/252 (0%)
Strand=Plus/Minus
Query 16448 AGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGT 16507
|||| |||| |||||||||| ||||| ||||| ||||| ||||| | | || || |
Sbjct 335091 AGAT-TCTTAGAGATAACATTCAAGGTATCACAAAGCCTGCTATTAGAAGACTAGCCAGA 335033
Query 16508 CGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAG 16567
| ||||| || ||| | | || | ||| | || ||||| || | | ||||||||||
Sbjct 335032 AGAGGTGGTGTTAAGAGAATTTCCGCTTTGATTTACGAAGAAGTTAGAGTTGTTTTGAAG 334973
Query 16568 ATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAG 16627
||| | | | ||| ||| |||||| | |||||||||||||||||| | |||
Sbjct 334972 TCCTTTTTGGAAAACGTCATCAGAGATGCTGTTACCTATACCGAGCACGCTAAGAGAAAG 334913
Query 16628 ACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGT 16687
|||||||| || ||||| | || || || ||||| | ||||| | | | ||||||
Sbjct 334912 ACTGTCACTTCTTTGGATGTTGTTTACGCCTTGAAGAGACAAGGTAGAACCTTGTATGGT 334853
Query 16688 TTTGGAAGTTAA 16699
|| || |||||
Sbjct 334852 TTCGGTGGTTAA 334841
>seq21
Length=465222
Score = 107 bits (118), Expect = 3e-19
Identities = 169/242 (70%), Gaps = 0/242 (0%)
Strand=Plus/Plus
Query 16458 GAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAG 16517
|||||||||| ||||| ||||| ||||||||||| | | | || | | ||||| |
Sbjct 228570 GAGATAACATTCAAGGTATCACAAAGCCAGCTATTAGAAGATTAGCCAGAAGAGGTGGTG 228629
Query 16518 TCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCA 16577
| ||| | | || | ||| | || ||||| | | | ||| ||||| ||| |
Sbjct 228630 TTAAGAGAATTTCCGCTTTGATTTACGAAGAAGTCAGAGTTGTCTTGAAACAATTCTTGG 228689
Query 16578 AGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCT 16637
| | ||| ||| |||||| | |||||||||||||||||| | |||||||||||||
Sbjct 228690 AAAACGTCATCAGAGATGCTGTTACCTATACCGAGCACGCTAAGAGAAAGACTGTCACCT 228749
Query 16638 CCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTT 16697
| ||||| | ||||| || ||||| | ||||| | | | |||||||| || |||
Sbjct 228750 CATTGGATGTTGTCTACGCTTTGAAGAGACAAGGTAGAACTTTGTATGGTTTCGGTGGTT 228809
Query 16698 AA 16699
||
Sbjct 228810 AA 228811
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79075092111774
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |