Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ambrosiozyma_20monospora_20[genbank_20GCA_5F001599995.1_202016-03- 01] 118 sequences; 24,978,438 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq78 129 9e-26 seq13 118 2e-22 seq21 107 3e-19 >seq78 Length=10889 Score = 129 bits (142), Expect = 9e-26 Identities = 184/258 (71%), Gaps = 1/258 (0%) Strand=Plus/Minus Query 16448 AGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGT 16507 |||| |||| |||||||||| ||||| ||||| |||||||||||| | | | || | Sbjct 10178 AGAT-TCTTAGAGATAACATTCAAGGTATCACAAAGCCAGCTATCAGAAGATTAGCCAGA 10120 Query 16508 CGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAG 16567 | ||||| || ||| | | || | ||| |||||||||| | | | ||| |||||| Sbjct 10119 AGAGGTGGTGTTAAGAGAATTTCCGCTTTGATCTATGAAGAAGTCAGAGTTGTCTTGAAG 10060 Query 16568 ATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAG 16627 |||| | | | || ||| |||||| | |||||||||||||||||| | ||| Sbjct 10059 TCCTTCTTGGAAAATGTCATCAGAGATGCTGTTACCTATACCGAGCACGCTAAGAGAAAG 10000 Query 16628 ACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGT 16687 |||||||| || ||||| | || ||||| ||||| | ||||| | | | |||||| Sbjct 9999 ACTGTCACTTCTTTGGATGTTGTTTATGCCTTGAAGAGACAAGGTAGAACCTTGTATGGT 9940 Query 16688 TTTGGAAGTTAATCTTCT 16705 || || ||||| | ||| Sbjct 9939 TTCGGTGGTTAAACATCT 9922 >seq13 Length=713860 Score = 118 bits (130), Expect = 2e-22 Identities = 178/252 (71%), Gaps = 1/252 (0%) Strand=Plus/Minus Query 16448 AGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGT 16507 |||| |||| |||||||||| ||||| ||||| ||||| ||||| | | || || | Sbjct 335091 AGAT-TCTTAGAGATAACATTCAAGGTATCACAAAGCCTGCTATTAGAAGACTAGCCAGA 335033 Query 16508 CGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAG 16567 | ||||| || ||| | | || | ||| | || ||||| || | | |||||||||| Sbjct 335032 AGAGGTGGTGTTAAGAGAATTTCCGCTTTGATTTACGAAGAAGTTAGAGTTGTTTTGAAG 334973 Query 16568 ATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAG 16627 ||| | | | ||| ||| |||||| | |||||||||||||||||| | ||| Sbjct 334972 TCCTTTTTGGAAAACGTCATCAGAGATGCTGTTACCTATACCGAGCACGCTAAGAGAAAG 334913 Query 16628 ACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGT 16687 |||||||| || ||||| | || || || ||||| | ||||| | | | |||||| Sbjct 334912 ACTGTCACTTCTTTGGATGTTGTTTACGCCTTGAAGAGACAAGGTAGAACCTTGTATGGT 334853 Query 16688 TTTGGAAGTTAA 16699 || || ||||| Sbjct 334852 TTCGGTGGTTAA 334841 >seq21 Length=465222 Score = 107 bits (118), Expect = 3e-19 Identities = 169/242 (70%), Gaps = 0/242 (0%) Strand=Plus/Plus Query 16458 GAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAG 16517 |||||||||| ||||| ||||| ||||||||||| | | | || | | ||||| | Sbjct 228570 GAGATAACATTCAAGGTATCACAAAGCCAGCTATTAGAAGATTAGCCAGAAGAGGTGGTG 228629 Query 16518 TCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCA 16577 | ||| | | || | ||| | || ||||| | | | ||| ||||| ||| | Sbjct 228630 TTAAGAGAATTTCCGCTTTGATTTACGAAGAAGTCAGAGTTGTCTTGAAACAATTCTTGG 228689 Query 16578 AGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCT 16637 | | ||| ||| |||||| | |||||||||||||||||| | ||||||||||||| Sbjct 228690 AAAACGTCATCAGAGATGCTGTTACCTATACCGAGCACGCTAAGAGAAAGACTGTCACCT 228749 Query 16638 CCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTT 16697 | ||||| | ||||| || ||||| | ||||| | | | |||||||| || ||| Sbjct 228750 CATTGGATGTTGTCTACGCTTTGAAGAGACAAGGTAGAACTTTGTATGGTTTCGGTGGTT 228809 Query 16698 AA 16699 || Sbjct 228810 AA 228811 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79075092111774