Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ambrosiozyma_20monospora_20[genbank_20GCA_5F001599995.1_202016-03- 01] 118 sequences; 24,978,438 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq12 233 2e-56 >seq12 Length=722896 Score = 233 bits (258), Expect = 2e-56 Identities = 627/962 (65%), Gaps = 22/962 (2%) Strand=Plus/Minus Query 21118 AATATTTATTTAAAAATCAGCATCTAATGAGAAAACATT---------ATCTTCtttttt 21168 |||| | | ||| |||||| |||| || |||||| | || ||| || || || Sbjct 314520 AATAATCAATTAGAAATCATCATCGAAAGAGAAACCGTTTTCAACAGGATCCTCCTTCTT 314461 Query 21169 tGACATAATTCCCATTTTTTGATAATCACTAACTCTTTTTTCGAAAAAATTTGTCTTTCC 21228 | ||||| || |||||||| ||| |||||| || ||||| || || ||||| || Sbjct 314460 AGCCATAACACCAGCCTTTTGATAGTCAGAAACTCTCTTCTCGAAGAAGTTAGTCTTACC 314401 Query 21229 TTCCAATGATATAGATTCCATAAAATCAAATGGATTTTCAGATTTAAATATTTTATTACA 21288 |||| || ||| |||||| || || ||||| ||| || | || || || || Sbjct 314400 AGCCAAGGAAATATTTTCCATGAAGTCGAATGGGTTTGTGACGTTGTAGATCTTCTTGCA 314341 Query 21289 ACCCAGTTCTGATAATAATCTATCTGCTACAAATTCTATATATTGACACATTAATTCACA 21348 |||| | || ||||| || || |||||||| | ||||||||||| || ||||| Sbjct 314340 TCCCAAAGCAACCAACAATCTGTCAGCAACAAATTCAACGTATTGACACATCAAGTCACA 314281 Query 21349 ATTCATACCGATCAATTTTACAGGAAGAGCTTTTGTCAAAAAAGATTTTTCTATAGAGAC 21408 |||||||| | ||| || || || | ||| | || || | ||||| || || Sbjct 314280 GTTCATACCCAACAACTTGACTGGCAAAGCATCAGTGAAGTATCTCTTTTCAATGTCAAC 314221 Query 21409 GGCTTCAACAATTATATTTATTA----TCCTAGATGTACTAGGGGGATACAATAATTGTT 21464 ||||||| || || || | | || || | |||| | || || Sbjct 314220 GGCTTCAGTGATAATCTTGGCAACAATTTCTTCATCT----GGGGTGTTGTTCAAGTGAG 314165 Query 21465 TAAACATCAAACATGCAAAATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAG 21524 || | |||||| || |||||| ||||| ||||||||| |||| || ||||| |||| Sbjct 314164 AGAATAACAAACAAGCGAAATCAGTATGCAGACCTTCATCTCTACAGATCAATTCGTTAG 314105 Query 21525 AAAATGTTAAACCGGGCATTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATGCTC 21584 | || || ||||| ||||| || |||||||| || ||||| || || | ||||| | | Sbjct 314104 AGAAAGTCAAACCTGGCATCAAACCTCTCTTCTTCAACCAGAAGATGGCAGCAAAAGAAC 314045 Query 21585 CTGAAAAGAAAATGCCCTCAACGGCAGCAAATGCAACTAATCGTTCACCGTATGTAGATT 21644 | || |||||||| |||||||| |||||||| ||||| |||| |||||| | || | Sbjct 314044 CAGAGAAGAAAATACCCTCAACAGCAGCAAAGGCAACCAATCTTTCACCAAACAAAGCAT 313985 Query 21645 CTTTATCCAATATCCATTTTTCTGCCCATTTTGCCTTTTCTTTAATACAATCAATTGTAT 21704 || ||| | |||||| | ||||| | || |||||| | ||||| || ||| Sbjct 313984 TTTCATCAGAAATCCATCTCAAAGCCCAGTCCGCTTTTTCTCTGATACATGGAACGTTAT 313925 Query 21705 CAATAGCTTTTAA-AAGATGAtttttttCATCTACATCGGTTATGNNNNNNNNNNNNNNN 21763 ||||||| || || |||| || ||| | | ||| | | Sbjct 313924 CAATAGCATTGAATAAGA-AATCAGCTTCCTTTGGATCCTTGACATAAGTGTCAATCAAT 313866 Query 21764 NNACTATACATTTCAGAATGTATATTTTCTATCGCTATCTGAAATCCGTAAAAACATCTT 21823 | || ||||||| || || ||||| ||| || || || ||||| ||||| | Sbjct 313865 AGAGAGTAAGTTTCAGAGTGGATGTTTTCCATCATGATTTGGAAACCGTAGAAACACTTA 313806 Query 21824 GCCTCTGAACATTGAACCTCGGAATAAAATCGTTGAGCCAAGTTTTCATTTACTATTCCA 21883 || || | | |||||| || | | | || || | ||||||||||||| || || ||| Sbjct 313805 GCTTCAGGAACTTGAACTTCAGCAGAGAAGTTTTCAACCAAGTTTTCATTGACAATACCA 313746 Query 21884 TCACTGGCGGCAAAAAATGCCAATATATTTTTTATAAAATATCGTTCGTTATCTGTTAA- 21942 || || ||||| || ||||| | | || ||||||| ||| ||| | | || Sbjct 313745 TCGGAAGCAGCAAAGAAAGCCAAAACTCTAGACATGAAATATCTTTCATTAGCATTCAAC 313686 Query 21943 --TTTTTTCCAATCTAATAAATCTTTTGATAAATCTACTTCTTCAGTTGTCCAAAAGCTA 22000 || ||||| || ||||| || || ||||| | ||||||| ||||| || | Sbjct 313685 TTGTTGTTCCAGTCATCCAAATCCTTAGACAAATCAATCTCTTCAGCAGTCCAGAAAGAA 313626 Query 22001 GCAATAGCCTTTTTATACATAATCCAGATATCATTATATATTATTGGAAATATTACAAAC 22060 || ||| || ||||| |||||| |||| || | ||||| || | ||||| Sbjct 313625 GCTTCTTGCTTCTTGTACATTTGCCAGATTTCATGGTACTTGATTGGGAACAAAACAAAT 313566 Query 22061 CT 22062 || Sbjct 313565 CT 313564 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531900015446320