Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ambrosiozyma_20monospora_20[genbank_20GCA_5F001599995.1_202016-03- 01] 118 sequences; 24,978,438 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq23 309 4e-79 seq12 271 9e-68 >seq23 Length=373761 Score = 309 bits (342), Expect = 4e-79 Identities = 1360/2142 (63%), Gaps = 41/2142 (2%) Strand=Plus/Minus Query 61982 ATCCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACAT 62041 ||| || || | ||| |||||||||| ||| | || | || || | |||||| ||||| Sbjct 129907 ATCTTTATCAACTGTAAATTGAATGGCAGCAGCGGCAGCTTGAGTTCTTAGATAATACAT 129848 Query 62042 TCCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGA-ATAAC 62100 || || || | ||| |||| ||||| |||||||| || | || || Sbjct 129847 ACCAGTCTTCAAACCCTTCTTCCAACCGTAGAAATGCATGGAAGTCAACTTACCCATGGT 129788 Query 62101 TCGGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTG 62160 | || ||| | | || || |||| |||||| |||||||| | | || || ||||| | Sbjct 129787 TGGGTTCTTCAAG-TGAATGTTCAAAGATTGGGATTGATCGACGTAAGCACCTCTGTCAG 129729 Query 62161 CAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAA-CTCGCTTA 62219 ||| ||| | || || | |||||| | ||||||||| | ||| || |||| || | | Sbjct 129728 CAGACATATCAATAATAGCCTTTTGAGAAATTTCCCACACAGTCTTGTAAATCTTTTTCA 129669 Query 62220 ATATCTTCTGGAAGGTTTGTA---TTCTGAATGGATCCACCATCTGCCATAATCCTATTC 62276 || || || |||| || | || |||||||| || ||| | ||||| ||| Sbjct 129668 AT-TCATCAGGAACATTAGGCAAGTTTTGAATGGAACCGTTATCAGAAATAATGAAGTTC 129610 Query 62277 TTGATCTCATCATTCCATAATTTTCTCTCGGTTAA--AACTC--TAAGGAGATGCGGATT 62332 || || | ||||| ||| | | ||||| || || | | | | || || Sbjct 129609 TTCATGTTATCATCCCAAAGAC----CCAAGTTAACCAAATCCTTCAACAAGTATGGGTT 129554 Query 62333 AACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTC 62392 || | ||| ||||| |||| ||| ||||| | || |||||| || ||| || || || Sbjct 129553 GACAATTTGGAATTCACCAGCCAAGACTCTTCTAGAGTAAATGTTGGAGGTGTATGGCTC 129494 Query 62393 CACCGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAA 62452 | | ||||| | ||||| ||||||| ||| || ||||| ||||| || || | ||| Sbjct 129493 GAAACATTCATTGTAACCCAAGATTTGAGAAGTGGAAGCAGTTGGCATTGGAGCTAACAA 129434 Query 62453 TAAACTATTTCTAAGACCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAG 62512 || ||||| | ||||| | || | || || | || ||||| | ||| | Sbjct 129433 CAATGAGTTTCTTAAACCGTGCTTGACAATGTCTTCCTTCAAAGAATCCCACTCCCATAA 129374 Query 62513 ATCCGACGG--TACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGAT 62570 ||| | || | || ||| | | || | | || || Sbjct 129373 ATCAGTTGGCTTCTTACCCCATAAATCAAA--TTGCAATAATCCTTGAGAAGCTGGAGAG 129316 Query 62571 CCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCA 62630 || | | || || |||| ||||| | || || | |||| | || || || | Sbjct 129315 CCCTTAAAAGTTTCATATGCACCTTCTTCCTTGGCCAATTCAACAGAAGCTTCCAAACCG 129256 Query 62631 CCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAAT 62690 ||| ||| | ||||||||||| | | || | |||| ||||| || ||||||| Sbjct 129255 GCGTGATACAAAGTTTCGAAGATTTGAATGTTCAACTCTTTAGCTTCAGGGGAATCAAAT 129196 Query 62691 GGATAATTTAAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTA 62750 ||| | || | || || | || ||||| ||||||||||| | | | || ||||| Sbjct 129195 GGAATTCTCAATTGCATGAAAGTATCGGCTAAACCTTGAACACCTAAAGCAATTGGTCTG 129136 Query 62751 TGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTA 62810 | |||| | || || || ||| | || || || || || | || ||||| || Sbjct 129135 TTTCTCATGTTGGATCTTCTAGCAGTTTCAACTGGGTAGTAGTTTCTGTCAATAATCTTG 129076 Query 62811 TTGAGATTTCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATCGCC-- 62868 || | || || | || ||| | | || | || ||| || ||| | | | Sbjct 129075 TTCAAGTTCTTGGTGACCACCTTGGCAATCTCATGCAATTTCTTGAAGTCATACCAGCAA 129016 Query 62869 -------CATCTA---TTACAAACATGTTCAAGGCAACAGATGCCAGATTACAAACGGCT 62918 |||| | | ||||| ||| |||||||| |||| |||||||| || Sbjct 129015 GTAGTGTCATCAAAAGTAACAAAGGCTGGCAAAGCAACAGAAGCCAAGTTACAAACAGCA 128956 Query 62919 ACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTT 62978 ||| | | || | ||||| | || ||| || | || |||||||| Sbjct 128955 GTTTCAGTTGGGTCGGAATATTCAACAATTTCACAACACAAGTTGGATGACTTGATAACA 128896 Query 62979 CCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTA 63038 || || || | ||| ||| |||||||||||| ||||| || || | ||||| |||||| Sbjct 128895 CCCAAGTTCTTTTGGTTAGACTTTTTGTTACAAGCATCTTTGTACAACATGAAAGGAGTA 128836 Query 63039 CCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGAT 63098 ||||||||| | |||| ||| | || | | ||| | | ||||||| | | | | Sbjct 128835 CCAGTTTCAGTTTGAGCTTCCAAGATGGAGTACCACAACTTTTGAGCCTTAACAGTGGTT 128776 Query 63099 TTGTATCTCCTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACA 63158 | ||| | ||| |||| || || ||||| || ||||| || || |||| Sbjct 128775 CTACCTCTACCTTCAGTTTCATACTTGGTGTACAACTTCTCAAACTCATCACCATAAACC 128716 Query 63159 TTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACT 63218 | || || ||| ||| || | | ||| | ||| || | | | ||| Sbjct 128715 TCAGATAAACCTGGAGCATCAGAAGGTGAGAACAAAGTCCATTCAGAATTAGATTCAACT 128656 Query 63219 CGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCC 63278 | ||||| || | ||| |||||||| | |||| || | |||||||| ||| ||| Sbjct 128655 CTCTTCATGAACAAATCTGGAATCCACAAAGCTGGGAACAAATCTCTGGCTCTGATTTCT 128596 Query 63279 TCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCC 63338 || || || ||||||| | | ||| | || | | || |||| ||||| ||||| Sbjct 128595 TCTTTACCGTGATTCTTTCTGATATCAATAAAGTCAAAGATGTCAGCGTGCCATGGTTCA 128536 Query 63339 AAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTG 63398 | || | ||| | | | ||||| | ||||| || || ||||| | |||||||| || Sbjct 128535 ATATAAAGGGCAAAAGCACCAGGTCTCTTGTTACCACCTTGATCAACATATCTAGCAGTA 128476 Query 63399 TTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATA 63458 || || ||||||| | ||| ||||| ||||| ||||| |||| |||||||||| ||| Sbjct 128475 TTGTTGAAAACTCTAACCATAGGAATGATACCATTTGAAGTACCGTTGGTACCGGCGATG 128416 Query 63459 TAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAG 63518 || ||| |||| | ||| || ||| |||||| || || ||||| | ||||| Sbjct 128415 TAAGAACCAGTGGCTCTAATGTTGTGAATGTGTAGACCAATACCACCTGCAGTCTTAGAA 128356 Query 63519 ATTAATGCGCATCGTTTTAACGTGTCATAGATACCCTCTATGCTATCATCGATCATGTTA 63578 || | || || || || || ||||| ||||| || || ||| || ||||| | Sbjct 128355 ATCAGAGCACACTCCTTCAATGTATCATAAATACCTTCAATAGAATCTTCCTTCATGGCA 128296 Query 63579 AGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAA 63638 | | ||||| |||||||| | ||| ||| || || ||||| || || |||||| Sbjct 128295 ACCAAGAAACAAGAGGACATTTGTGGGCGAGGAGTACCAGCGTTAAACAAAGTTGGAGAA 128236 Query 63639 GCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCT----GAGTCTAT 63694 || || || || || ||| || | | ||||| ||||| | | || || | | | Sbjct 128235 GCATGGGTGAAATATCTTTGGGACATCAAGTTGTAAGTCTCTAAAACTTTAGGAATGT-T 128177 Query 63695 ATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGAT 63754 ||| | ||| || || | || || | ||| | || || || ||||||||| | | Sbjct 128176 ATCACCGTGA---ATACCAATGGCAACTCTCATGATCAAATGTTGTGGTCTTTCAGCAAC 128120 Query 63755 CTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA 63814 ||| | ||| |||| | |||||| |||||||||| || ||||| ||||||||||| Sbjct 128119 CTTACCATCAATTCTCAAAAGATAGGATCTTTCCAAAGTCTTGAAACCGAAATAGTTGTA 128060 Query 63815 TGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTAT 63874 | || || || |||||| | || | ||||| | | || || || | || || Sbjct 128059 TTGGAAATCACGGTCGTAATTGATGGCGGAGTTTAACTCTTCAGCATGCTTTTGCACAAT 128000 Query 63875 ATCCATGGTGATACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTT 63934 || || ||||||| || || || | || ||||| ||||| |||||||| || Sbjct 127999 CTCATAAGTTTCTTTTGAAATCATAGGGGATAGCTTACCATTCTTAGGGTTAACATATTT 127940 Query 63935 GAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATAC 63994 | |||| | || | || | ||| | || | |||| |||||||| ||| || | Sbjct 127939 GTATAATTGTTCAACGACGGAAGAGAATTGCTTAGTGGTTTGCTTGTGTAAATTGGAGAT 127880 Query 63995 GGCTATTCTGGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAGT-GGCTGCTA 64053 || ||||| || || | | || ||||| || || || || || || || || Sbjct 127879 AGCAATTCTAGCAGCCAAGACAGCGTAATCAGGGTGGACAGTGGT-CATGTAAGCAGCGG 127821 Query 64054 TTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCAT 64095 |||| || |||| | |||||||| | ||||| || |||| Sbjct 127820 TTTCAGCAGCCAAGTTATCCAATTCAATGGTTGTAACACCAT 127779 >seq12 Length=722896 Score = 271 bits (300), Expect = 9e-68 Identities = 613/908 (68%), Gaps = 15/908 (2%) Strand=Plus/Minus Query 32990 CTTCTTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAG 33049 |||||| || |||||| || ||||| || ||| || | || ||||| || |||| Sbjct 314466 CTTCTT-AGCCATAACACCAGCCTTTTGATAGTCAGAAACTCTCTTCTCGAAGAAGTTAG 314408 Query 33050 TTTTTCCTTCCAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAttt 33109 | || || |||| || |||||||||||||| || || || || || || || || || | Sbjct 314407 TCTTACCAGCCAAGGAAATATTTTCCATGAAGTCGAATGGGTTTGTGACGTTGTAGATCT 314348 Query 33110 ttttAAATCCCAATTCAGAAATCAATCTATCCGCGACGAATTCTATATATGTTTTCATCA 33169 | || ||||||| || | |||||| || || || ||||| | ||| ||||| Sbjct 314347 TCTTGCATCCCAAAGCAACCAACAATCTGTCAGCAACAAATTCAACGTATTGACACATCA 314288 Query 33170 TTTCACAATTCATTCCTATAAGTTTAACTGGAAGAGCCGCAGT-AAGAAATTCTTGTTCA 33228 ||||| ||||| || | | || ||||| | ||| |||| ||| | |||| |||| Sbjct 314287 AGTCACAGTTCATACCCAACAACTTGACTGGCAAAGCATCAGTGAAGTATCTCTT-TTCA 314229 Query 33229 ATGGATACCGCATCTGTTATAATAGATCTAACGGTTTCTTCA-CTCGGTGGATGCAATAA 33287 ||| || || || || ||||| ||| |||||||| || || | || || Sbjct 314228 ATGTCAACGGCTTCAGTGATAATCTTGGCAACAATTTCTTCATCTGGGGTGTTGTTC-AA 314170 Query 33288 ATGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTC 33347 || || | |||||| |||||||| |||||||| || ||||||| || | ||| Sbjct 314169 GTGAGAGAATAACAAACAAGCGAAATCAGTATGCAGACCTTCATCTCTACAGATCAATTC 314110 Query 33348 GTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAA 33407 ||| || || || | || ||||| | || | ||| || | ||| || |||| ||| || Sbjct 314109 GTTAGAGAAAGTCAAACCTGGCATCAAACCTCTCTTCTTCAACCAGAAGATGGCAGCAAA 314050 Query 33408 TGATCCAGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACC 33467 || ||||| ||||| || || || || ||||||||||||| | ||| || ||| | Sbjct 314049 AGAACCAGAGAAGAAAATACCCTCAACAGCAGCAAAGGCAACCAATCTTTCACCAAACAA 313990 Query 33468 GGCGCTGTCAT---GTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCAT 33524 || | |||| ||||| | |||||| || || || | | | | ||| || | Sbjct 313989 AGCATTTTCATCAGAAATCCATCTCAAAGCCCAGTCCGCTTTTTCTCTGATACATGG-AA 313931 Query 33525 CGTT-TCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGA 33583 |||| || || ||||| || | | | ||| || ||| || |||||||| || | Sbjct 313930 CGTTATCAATAGCATTGAATAAGAAATCAGCTTCCTTTGGATCCTTGACATAAGTGTCAA 313871 Query 33584 TCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAAC 33643 |||| ||| || |||| || || |||||||| || || || || |||||||||| Sbjct 313870 TCAATAGAGAGTAAGTTTCAGAGTGGATGTTTTCCATCATGATTTGGAAACCGTAGAAAC 313811 Query 33644 ATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTA 33703 | |||| || | || || ||||| | | | || ||| |||| |||||||| || | Sbjct 313810 ACTTAGCTTCAGGAACTTGAACTTCAGCAGAGAAGTTTTCAACCAAGTTTTCATTGACAA 313751 Query 33704 TTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTG 33763 | || || || ||||| || ||||| || || |||||| |||| | | | Sbjct 313750 TACCATCGGAAGCAGCAAAGAAAGCCAAAACTCTAGACATGAAATATCTTTCAT-TAGCA 313692 Query 33764 TT--AGT--TTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAA 33819 || | | || ||||| |||| | ||| ||||| | ||| | ||||| | ||||| Sbjct 313691 TTCAACTTGTTGTTCCAGTCATCCAAATCCTTAGACAAATCAATCTCTTCAGCAGTCCAG 313632 Query 33820 AATGATGCCTCTGCCTTTTTATACATGTTCCAGATGTCATAATATTGGATTGGGAAAATA 33879 || || || ||| ||| || ||||| | |||||| |||| || | ||||||||| | | Sbjct 313631 AAAGAAGCTTCTTGCTTCTTGTACATTTGCCAGATTTCATGGTACTTGATTGGGAACAAA 313572 Query 33880 ACAAATCT 33887 |||||||| Sbjct 313571 ACAAATCT 313564 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622946281152880