Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ambrosiozyma_20monospora_20[genbank_20GCA_5F001599995.1_202016-03- 01] 118 sequences; 24,978,438 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq40 118 9e-22 seq3 118 9e-22 seq17 100 2e-16 >seq40 Length=167105 Score = 118 bits (130), Expect = 9e-22 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | ||||| |||||||| ||||| || | || || | ||||| || | Sbjct 19764 ATGCAAATCTTTGTTAAAACATTGACTGGTAAGACTATCACTTTGGAAGTTGAATCATCT 19823 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||| || | || ||| |||||| || || || || || || || |||||| Sbjct 19824 GACACCATTGATAACGTTAAATCAAAGATCCAAGATAAGGAGGGTATTCCACCTGATCAA 19883 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 |||||| | |||| || || |||||| | ||||||| |||| | || || ||| Sbjct 19884 CAGAGATTAATTTTCGCTGGTAAGCAATTAGAAGATGGTAGAACYTTGTCTGACTACAAC 19943 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 || ||||| ||||| || |||| || || |||||||||||||| || Sbjct 19944 ATCCAAAAGGAATCAACTCTTCACTTGGTTTTAAGATTGAGAGGTGG 19990 Score = 93.3 bits (102), Expect = 4e-14 Identities = 119/167 (71%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||| || | || || ||||| || || ||||| || || || || ||| Sbjct 19596 GACACCATTGACAATGTTAAGTCCAAGATWCAAGATAAGGAAGGTATTCCACCTGACCAA 19655 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 || ||| |||||| || || |||||| | ||||||| |||| | || || ||| Sbjct 19656 CAAAGATTGATTTTCGCTGGTAAGCAATTAGAAGATGGTAGAACYTTGTCTGACTACAAC 19715 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 || ||||| ||||| || |||| || ||||| ||||||||||| || Sbjct 19716 ATYCAAAAGGAATCAACWCTTCACTTGGTGTTGAGATTGAGAGGTGG 19762 >seq3 Length=1000385 Score = 118 bits (130), Expect = 9e-22 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049 ||||||| | ||||| || || || ||||| || | |||||| | ||||| || | Sbjct 936521 AATGCAAATTTTTGTTAAGACCTTGACTGGTAAGACAATTACCTTGGAAGTTGAATCTTC 936462 Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 ||||||||| || | ||||| ||||| || || ||||| || || || ||||| Sbjct 936461 CGACACCATTGACAATGTCAAGTCCAAGATCCAAGATAAGGAAGGTATCCCACCTGATCA 936402 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169 ||| ||| |||| | | ||| |||||| | ||||| | |||| | | ||| || || Sbjct 936401 ACAAAGATTGATCTTTGCCGGTAAGCAATTGGAAGACGGTAGAACCTTGTCCGACTACAA 936342 Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 ||||||||| ||||| || | || || || || ||||||||||| || Sbjct 936341 CATTCAAAAGGAATCCACTTTGCACTTGGTTTTGAGATTGAGAGGTGG 936294 >seq17 Length=626534 Score = 100 bits (110), Expect = 2e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 23988 AAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCC 24047 || |||||| | ||||| || || | || || || | || || | || ||||| || Sbjct 620979 AAGATGCAAATTTTTGTTAAGACCCTTACAGGTAAGACCATCACTTTGGAGGTCGAATCC 620920 Query 24048 AACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGAT 24107 |||||||| || | ||||| ||||| ||||| ||||| || || || || Sbjct 620919 TCTGACACCATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATCCCACCTGAC 620860 Query 24108 CAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTAT 24167 ||||| ||| |||||| | || |||||| | ||||||| |||| | || || Sbjct 620859 CAACAAAGATTGATTTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCTGACTAC 620800 Query 24168 AACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 ||||||||||| ||||| || |||| || || || ||||||||||| || Sbjct 620799 AACATTCAAAAGGAATCCACTCTTCACTTGGTTTTGAGATTGAGAGGTGG 620750 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429935381698290