Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ambrosiozyma_20monospora_20[genbank_20GCA_5F001599995.1_202016-03-
01] 118 sequences; 24,978,438 total letters
Query= NC_007767.1
Length=132959
Score E
Sequences producing significant alignments: (Bits) Value
seq3 113 4e-20
seq17 98.7 8e-16
seq40 86.0 5e-12
>seq3
Length=1000385
Score = 113 bits (124), Expect = 4e-20
Identities = 164/229 (72%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAG 115344
||||||||||||||| || || | || || || || |||||| | ||| || ||
Sbjct 936521 AATGCAAATTTTTGTTAAGACCTTGACTGGTAAGACAATTACCTTGGAAGTTGAATCTTC 936462
Query 115345 CGACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATC 115403
|||||| ||| |||| || || || || ||||| ||||| |||| |||||
Sbjct 936461 CGACACCATTG-ACAATGTCAAGTCCAAGATCCAAGATAAGGAAGGTATCCCACCTGATC 936403
Query 115404 AGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATA 115463
| |||||| | || | ||| || || ||||| ||||| | | |||| || |||| || |
Sbjct 936402 AACAAAGATTGATCTTTGCCGGTAAGCAATTGGAAGACGGTAGAACCTTGTCCGACTACA 936343
Query 115464 ACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512
|||||||||| || || ||| | || |||| ||||||||| |||| ||
Sbjct 936342 ACATTCAAAAGGAATCCACTTTGCACTTGGTTTTGAGATTGAGAGGTGG 936294
>seq17
Length=626534
Score = 98.7 bits (108), Expect = 8e-16
Identities = 162/231 (70%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 115283 AAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCC 115342
|| |||||||||||||| || || || || || || ||||| || | || || |||
Sbjct 620979 AAGATGCAAATTTTTGTTAAGACCCTTACAGGTAAGACCATCACTTTGGAGGTCGAATCC 620920
Query 115343 AGCGACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGA 115401
||||| ||| |||| || || || || || || ||||| |||| |||
Sbjct 620919 TCTGACACCATTG-ACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATCCCACCTGA 620861
Query 115402 TCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTA 115461
|| |||||| | |||| ||| || || ||||| ||||||| | ||| || | || ||
Sbjct 620860 CCAACAAAGATTGATTTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCTGACTA 620801
Query 115462 TAACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512
||||||||||| || || ||| | || |||| ||||||||| |||| ||
Sbjct 620800 CAACATTCAAAAGGAATCCACTCTTCACTTGGTTTTGAGATTGAGAGGTGG 620750
>seq40
Length=167105
Score = 86.0 bits (94), Expect = 5e-12
Identities = 98/134 (73%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 115379 GATAAAGAAGGCGTCCCCGTTGATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAA 115438
||||| ||||| | || ||| || |||||| | |||| || || || |||||||||
Sbjct 19629 GATAAGGAAGGTATTCCACCTGACCAACAAAGATTGATTTTCGCTGGTAAGCAATTAGAA 19688
Query 115439 GATGACAAAACCATGGCCGATTATAACATTCAAAAAGAGTCTACTATACATATGGTGTTG 115498
|||| | ||| || | || || ||||| ||||| || || || | || ||||||||
Sbjct 19689 GATGGTAGAACYTTGTCTGACTACAACATYCAAAAGGAATCAACWCTTCACTTGGTGTTG 19748
Query 115499 AGATTGCGAGGAGG 115512
|||||| |||| ||
Sbjct 19749 AGATTGAGAGGTGG 19762
Score = 84.2 bits (92), Expect = 2e-11
Identities = 156/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345
|||||||| ||||| ||||| | || || || || || || | ||| || ||
Sbjct 19764 ATGCAAATCTTTGTTAAAACATTGACTGGTAAGACTATCACTTTGGAAGTTGAATCATCT 19823
Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405
||||| ||| | || ||| ||| || ||||| || || | || ||||||
Sbjct 19824 GACACCATTGATAACGTTAAATCAAAGATCCAAGATAAGGAGGGTATTCCACCTGATCAA 19883
Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465
|| ||| | |||| || || || ||||||||||||| | ||| || | || || |||
Sbjct 19884 CAGAGATTAATTTTCGCTGGTAAGCAATTAGAAGATGGTAGAACYTTGTCTGACTACAAC 19943
Query 115466 ATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGAAA 115515
|| ||||| || || ||| | || |||| || |||||| |||| || ||
Sbjct 19944 ATCCAAAAGGAATCAACTCTTCACTTGGTTTTAAGATTGAGAGGTGGTAA 19993
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 425343388302160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |