Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ambrosiozyma_20monospora_20[genbank_20GCA_5F001599995.1_202016-03-
01] 118 sequences; 24,978,438 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq17 129 5e-25
seq40 123 2e-23
seq3 116 3e-21
>seq17
Length=626534
Score = 129 bits (142), Expect = 5e-25
Identities = 167/229 (73%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| ||||| ||||| | || ||||| ||||||| | || || || || |||
Sbjct 620976 ATGCAAATTTTTGTTAAGACCCTTACAGGTAAGACCATCACTTTGGAGGTCGAATCCTCT 620917
Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116
||||| || || || || ||| || ||| ||||| ||||| || ||||||||||
Sbjct 620916 GACACCATTGA--CAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATCCCACCTGACC 620859
Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176
|||| | | |||||||| || || ||||| ||||||| | | ||| || || ||||
Sbjct 620858 AACAAAGATTGATTTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCTGACTACA 620799
Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
| |||||||| |||||||| || || || || | || | ||||| ||
Sbjct 620798 ACATTCAAAAGGAATCCACTCTTCACTTGGTTTTGAGATTGAGAGGTGG 620750
>seq40
Length=167105
Score = 123 bits (136), Expect = 2e-23
Identities = 169/234 (72%), Gaps = 2/234 (1%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| ||||| || || ||||| ||||| | ||||| | ||||| || || |||
Sbjct 19764 ATGCAAATCTTTGTTAAAACATTGACTGGTAAGACTATCACTTTGGAAGTTGAATCATCT 19823
Query 25059 GACACTATCGAGTCAC-TGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117
||||| || || | || | || ||| ||| || || || || ||||||||||| ||
Sbjct 19824 GACACCATTGA-TAACGTTAAATCAAAGATCCAAGATAAGGAGGGTATTCCACCTGATCA 19882
Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177
|||| | | ||||| || || || ||||||||||||| | | || || || |||||
Sbjct 19883 ACAGAGATTAATTTTCGCTGGTAAGCAATTAGAAGATGGTAGAACYTTGTCTGACTACAA 19942
Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAAATTA 25231
|| ||||| ||||| || || || || || |||| | ||||| || || ||
Sbjct 19943 CATCCAAAAGGAATCAACTCTTCACTTGGTTTTAAGATTGAGAGGTGGTAACTA 19996
Score = 87.8 bits (96), Expect = 2e-12
Identities = 99/134 (74%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 25092 GACAAAGAAGGGATTCCACCTGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAA 25151
|| || ||||| ||||||||||||||||| | | ||||| || || || |||||||||
Sbjct 19629 GATAAGGAAGGTATTCCACCTGACCAACAAAGATTGATTTTCGCTGGTAAGCAATTAGAA 19688
Query 25152 GATGATCGCACTGTGGGCGATTACAATATTCAAAAAGAATCCACGCTACATTTAGTGCTA 25211
|||| | | || || || ||||| || ||||| ||||| || || || || ||| |
Sbjct 19689 GATGGTAGAACYTTGTCTGACTACAACATYCAAAAGGAATCAACWCTTCACTTGGTGTTG 19748
Query 25212 AGGCTAAGAGGAGG 25225
|| | ||||| ||
Sbjct 19749 AGATTGAGAGGTGG 19762
>seq3
Length=1000385
Score = 116 bits (128), Expect = 3e-21
Identities = 148/202 (73%), Gaps = 4/202 (2%)
Strand=Plus/Minus
Query 24996 ACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCG 25055
||||||||||| ||||| ||||| ||||| ||||| | || || | ||||| || ||
Sbjct 936523 ACAATGCAAATTTTTGTTAAGACCTTGACTGGTAAGACAATTACCTTGGAAGTTGAATCT 936464
Query 25056 TCTGACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTG 25113
|| ||||| || || || || ||| || ||| || || ||||| || |||||||
Sbjct 936463 TCCGACACCATTGA--CAATGTCAAGTCCAAGATCCAAGATAAGGAAGGTATCCCACCTG 936406
Query 25114 ACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATT 25173
| ||||| | | || |||||||| || ||||| ||||| | | | || || ||| |
Sbjct 936405 ATCAACAAAGATTGATCTTTGCCGGTAAGCAATTGGAAGACGGTAGAACCTTGTCCGACT 936346
Query 25174 ACAATATTCAAAAAGAATCCAC 25195
|||| |||||||| ||||||||
Sbjct 936345 ACAACATTCAAAAGGAATCCAC 936324
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433327376820170
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |