Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ambrosiozyma_20monospora_20[genbank_20GCA_5F001599995.1_202016-03- 01] 118 sequences; 24,978,438 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq12 226 3e-54 seq27 84.2 2e-11 seq10 84.2 2e-11 seq44 82.4 9e-11 >seq12 Length=722896 Score = 226 bits (250), Expect = 3e-54 Identities = 607/912 (67%), Gaps = 31/912 (3%) Strand=Plus/Minus Query 92782 TTCTTATTCATAACACCACATTTTTGGTATTCCCCAACttttttttCAAAGAAATTTGTC 92841 |||||| |||||||||| ||||| || || |||| | || || ||||| || ||| Sbjct 314465 TTCTTAGCCATAACACCAGCCTTTTGATAGTCAGAAACTCTCTTCTCGAAGAAGTTAGTC 314406 Query 92842 TTTCCTTCCAAAGATATCGAATTCACTA-GT-GATTGGATTCTTGGCGTTATAATACTTT 92899 || || |||| || || | || | || || ||| || || |||| || ||| Sbjct 314405 TTACCAGCCAAGGAAATATTTTCCATGAAGTCGAATGGGTTTGTGACGTTGTAGATCTTC 314346 Query 92900 TCACCGATCAACTCGTACAATAATCTATCAGCTACAAATTCTATGTACTGAGACATCAAA 92959 | | ||| | ||| ||||| ||||| |||||||| | ||| ||| ||||||| Sbjct 314345 TTGCATCCCAAAGCAACCAACAATCTGTCAGCAACAAATTCAACGTATTGACACATCAAG 314286 Query 92960 TCACAATTCATTCCTAGAAGACGT-ACAGGTAGAGCGTCGGTCAAGAAA-TCTTTCTCGA 93017 ||||| ||||| || | | || | || || | ||| || || ||| | ||||| || | Sbjct 314285 TCACAGTTCATACCCAACA-ACTTGACTGGCAAAGCATCAGTGAAGTATCTCTTT-TCAA 314228 Query 93018 TTACAACGGCTTCTTTCAAGATTT------CTATTACTCTACTATTTGGTGGTTTTTGTA 93071 | |||||||||| | | || | | ||| ||| | || ||| | | |||| Sbjct 314227 TGTCAACGGCTTCAGTGATAATCTTGGCAACAATT--TCTTC-ATCTGGGG--TGTTGTT 314173 Query 93072 CGACATAATTGTACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCA 93131 | | | | | | | || || || || || ||||| | |||||| |||| | |||| Sbjct 314172 CAAG-TGAGAGAATAACAAACAAGCGAAATCAGTATGCAGACCTTCATCTCTACAGATCA 314114 Query 93132 ACTCATTGCTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAG 93191 | || || ||| || |||||||| | || |||| ||||| | ||| || || | || Sbjct 314113 ATTCGTTAGAGAAAGTCAAACCTGGCATCAAACCTCTCTTCTTCAACCAGAAGATGGCAG 314054 Query 93192 CAAAACTACCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAA 93251 ||||| |||||| || || ||||| || || || ||||| || || | | ||| ||| Sbjct 314053 CAAAAGAACCAGAGAAGAAAATACCCTCAACAGCAGCAAAGGCAACCAATCTTTCACCAA 313994 Query 93252 AATTTGCGGAATTACTGCTGA--TCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACA 93309 | || | || | | || ||||| | |||||||| || ||||||| | ||||| Sbjct 313993 ACAAAGC--ATTTTCATCAGAAATCCATCTCAAAGCCCAGTCCGCTTTTTCTCTGATACA 313936 Query 93310 AGGTAGTGTTTCGATAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGT 93369 || | | || ||||| || |||| | |||| || | | ||| | || || Sbjct 313935 TGGAACGTTATCAATAGCATTGAATAAGAAATCAGCTTCCTTTGGATCCTTGACATAAGT 313876 Query 93370 ATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTA 93429 || || || ||||| || ||||||| |||| || ||||| |||||||| ||||| Sbjct 313875 GTCAATCAATAGAGAGTAAGTTTCAGAGTGGATGTTTTCCATCATGATTTGGAAACCGTA 313816 Query 93430 GAAACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATT 93489 |||||| ||||||| | | || ||||| ||| || | || || | |||||||| Sbjct 313815 GAAACACTTAGCTTCAGGAACTTGAACTTCAGCAGAGAAGTTTTCAACCAAGTTTTCATT 313756 Query 93490 GACTATACCATCGGATGCTGCaaaaaaaGCCAA---TATATGCTTTATAAAATGTTTCTC 93546 ||| ||||||||||| || ||||| |||||||| | || | || |||| | | || Sbjct 313755 GACAATACCATCGGAAGCAGCAAAGAAAGCCAAAACTCTAGAC---ATGAAATATCTTTC 313699 Query 93547 ATCATCTTTAAGC---TTATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGAC 93603 || | | || | | || | ||| || | ||| || || | ||| | ||||| | Sbjct 313698 ATTAGCATTCAACTTGTTGTTCCAGTCATCCAAATCCTTAGACAAATCAATCTCTTCAGC 313639 Query 93604 AGTCCAAAACGATGCTTCTGCTTTTTTGTACATATCCCATATGTCTTGATATTGAATTGG 93663 |||||| || || |||||| || |||||||| | ||| || || || || | ||||| Sbjct 313638 AGTCCAGAAAGAAGCTTCTTGCTTCTTGTACATTTGCCAGATTTCATGGTACTTGATTGG 313579 Query 93664 AAATATGACAAA 93675 || | ||||| Sbjct 313578 GAACAAAACAAA 313567 Score = 82.4 bits (90), Expect = 9e-11 Identities = 68/83 (82%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGAGCGT 126324 || ||| ||||||||||||||||||||| ||| || | | ||| | | ||||| |||| Sbjct 721280 AGGCAGTTTGGCCGAGTGGTCTAAGGCGTCAGGTTAAGGTCCTGATCTCTTCGGGGGCGT 721221 Query 126325 GGGTTCGAACCCCACACCTGACA 126347 |||||||||||||||| ||| || Sbjct 721220 GGGTTCGAACCCCACAACTGTCA 721198 >seq27 Length=331611 Score = 84.2 bits (92), Expect = 2e-11 Identities = 79/102 (77%), Gaps = 8/102 (8%) Strand=Plus/Minus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGAGCGT 126324 || ||| ||||||||||||||||||||| ||| || | | ||| | | ||||| |||| Sbjct 72813 AGGCAGTTTGGCCGAGTGGTCTAAGGCGTCAGGTTAAGGTCCTGATCTCTTCGGGGGCGT 72754 Query 126325 GGGTTCGAACCCCACACCTGACAAATTATTATTGGAATTTTT 126366 |||||||||||||||| ||| | |||||||||||| Sbjct 72753 GGGTTCGAACCCCACAACTG--------TCATTGGAATTTTT 72720 >seq10 Length=750806 Score = 84.2 bits (92), Expect = 2e-11 Identities = 70/86 (81%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGAGCGT 126324 || ||| ||||||||||||||||||||| ||| || | | ||| | | ||||| |||| Sbjct 357871 AGGCAGTTTGGCCGAGTGGTCTAAGGCGTCAGGTTAAGGTCCTGATCTCTTCGGGGGCGT 357930 Query 126325 GGGTTCGAACCCCACACCTGACAAAT 126350 |||||||||||||||| ||| || || Sbjct 357931 GGGTTCGAACCCCACAACTGTCACAT 357956 >seq44 Length=148404 Score = 82.4 bits (90), Expect = 9e-11 Identities = 68/83 (82%), Gaps = 0/83 (0%) Strand=Plus/Plus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGAGCGT 126324 || ||| ||||||||||||||||||||| ||| || | | ||| | | ||||| |||| Sbjct 137364 AGGCAGTTTGGCCGAGTGGTCTAAGGCGTCAGGTTAAGGTCCTGATCTCTTCGGGGGCGT 137423 Query 126325 GGGTTCGAACCCCACACCTGACA 126347 |||||||||||||||| ||| || Sbjct 137424 GGGTTCGAACCCCACAACTGTCA 137446 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556859978630320