Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ambrosiozyma_20monospora_20[genbank_20GCA_5F001599995.1_202016-03-
01] 118 sequences; 24,978,438 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq3 145 6e-30
seq17 141 8e-29
seq40 129 5e-25
>seq3
Length=1000385
Score = 145 bits (160), Expect = 6e-30
Identities = 169/228 (74%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||||||||||||||| || || || ||||| || | || | ||||| ||| | ||
Sbjct 936520 ATGCAAATTTTTGTTAAGACCTTGACTGGTAAGACAATTACCTTGGAAGTTGAATCTTCC 936461
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | ||| || |||| || || ||||| ||||| ||||| ||||| ||||||
Sbjct 936460 GACACCATTGACAATGTCAAGTCCAAGATCCAAGATAAGGAAGGTATCCCACCTGATCAA 936401
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
||| | | || |||||||| || || || || || | ||| | ||||| ||||||
Sbjct 936400 CAAAGATTGATCTTTGCCGGTAAGCAATTGGAAGACGGTAGAACCTTGTCCGACTACAAC 936341
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|||||||| |||||||| | || || |||||| ||||| | || |||
Sbjct 936340 ATTCAAAAGGAATCCACTTTGCACTTGGTTTTGAGATTGAGAGGTGGT 936293
>seq17
Length=626534
Score = 141 bits (156), Expect = 8e-29
Identities = 170/231 (74%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275
|||||||||||||||||||| || | || ||||| || ||||| | || || ||| ||
Sbjct 620979 AAGATGCAAATTTTTGTTAAGACCCTTACAGGTAAGACCATCACTTTGGAGGTCGAATCC 620920
Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335
| || ||| | ||| || |||| || || ||||||||||| ||||| ||||| ||
Sbjct 620919 TCTGACACCATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATCCCACCTGAC 620860
Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395
|||||| | | || ||||| || || || || || ||| | || | || || |||
Sbjct 620859 CAACAAAGATTGATTTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCTGACTAC 620800
Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
||||||||||| |||||||| | || || |||||| ||||| | || |||
Sbjct 620799 AACATTCAAAAGGAATCCACTCTTCACTTGGTTTTGAGATTGAGAGGTGGT 620749
>seq40
Length=167105
Score = 129 bits (142), Expect = 5e-25
Identities = 165/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||| ||||||||||| || || ||||| || ||||| | ||||| ||| | |
Sbjct 19764 ATGCAAATCTTTGTTAAAACATTGACTGGTAAGACTATCACTTTGGAAGTTGAATCATCT 19823
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | || | | ||| ||| || ||||| ||||||||||||||||| ||||||
Sbjct 19824 GACACCATTGATAACGTTAAATCAAAGATCCAAGATAAGGAGGGTATTCCACCTGATCAA 19883
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| | | || || || || || || ||||| ||| | || | || || ||||||
Sbjct 19884 CAGAGATTAATTTTCGCTGGTAAGCAATTAGAAGATGGTAGAACYTTGTCTGACTACAAC 19943
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|| ||||| ||||| || | || || ||||| ||||| | || |||
Sbjct 19944 ATCCAAAAGGAATCAACTCTTCACTTGGTTTTAAGATTGAGAGGTGGT 19991
Score = 86.0 bits (94), Expect = 5e-12
Identities = 104/144 (72%), Gaps = 0/144 (0%)
Strand=Plus/Plus
Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362
|| || ||||| ||||| ||||||||||| || |||||| | | || || || || ||
Sbjct 19620 AAGATWCAAGATAAGGAAGGTATTCCACCTGACCAACAAAGATTGATTTTCGCTGGTAAG 19679
Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACAT 22422
|| ||||| ||| | || | || || |||||||| ||||| ||||| || | ||
Sbjct 19680 CAATTAGAAGATGGTAGAACYTTGTCTGACTACAACATYCAAAAGGAATCAACWCTTCAC 19739
Query 22423 TTAGTTTTGCGATTGCGCGGAGGT 22446
|| || ||| ||||| | || |||
Sbjct 19740 TTGGTGTTGAGATTGAGAGGTGGT 19763
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419727396378670
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |