Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ambrosiozyma_20monospora_20[genbank_20GCA_5F001599995.1_202016-03- 01] 118 sequences; 24,978,438 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq17 172 1e-37 seq3 161 2e-34 seq40 158 2e-33 >seq17 Length=626534 Score = 172 bits (190), Expect = 1e-37 Identities = 166/213 (78%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| |||||||| || ||||| || ||||| ||||| || || || | || || ||||| Sbjct 620764 CAAAACCAAGTGAAGAGTGGATTCCTTTTGAATGTTGTAGTCAGACAAAGTTCTACCATC 620823 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 ||| || ||||| || || || || | |||||||||||| ||||| || ||||||||||| Sbjct 620824 TTCCAATTGCTTACCAGCAAAAATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTTGTC 620883 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 ||| ||||| | |||||| || |||||||| | ||||| || ||||| |||||||| Sbjct 620884 TTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAGGATTCGACCTCCAAAGTGATGGT 620943 Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || || |||||||| || || || ||||| Sbjct 620944 CTTACCTGTAAGGGTCTTAACAAAAATTTGCAT 620976 >seq3 Length=1000385 Score = 161 bits (178), Expect = 2e-34 Identities = 164/214 (77%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| |||||||| | ||||| || ||||| ||||| || ||||| | || || || || Sbjct 936308 CAAAACCAAGTGCAAAGTGGATTCCTTTTGAATGTTGTAGTCGGACAAGGTTCTACCGTC 936367 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 ||| || ||||| ||||| || || | ||||||||| || ||||| || |||||||| || Sbjct 936368 TTCCAATTGCTTACCGGCAAAGATCAATCTTTGTTGATCAGGTGGGATACCTTCCTTATC 936427 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 ||| ||||| | |||||| || |||||||| | ||||| ||||||||||| || || Sbjct 936428 TTGGATCTTGGACTTGACATTGTCAATGGTGTCGGAAGATTCAACTTCCAAGGTAATTGT 936487 Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 || || || | |||||| || || || |||||| Sbjct 936488 CTTACCAGTCAAGGTCTTAACAAAAATTTGCATT 936521 >seq40 Length=167105 Score = 158 bits (174), Expect = 2e-33 Identities = 162/212 (76%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 68250 AATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCT 68309 || |||||||| || || || || ||||||||||| || || || | || || |||||| Sbjct 19975 AAAACCAAGTGAAGAGTTGATTCCTTTTGGATGTTGTAGTCAGACAARGTTCTACCATCT 19916 Query 68310 TCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCT 68369 ||||| ||||| || ||||| || | ||| ||||| || |||||||| || ||||| ||| Sbjct 19915 TCTAATTGCTTACCAGCGAAAATTAATCTCTGTTGATCAGGTGGAATACCCTCCTTATCT 19856 Query 68370 TGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTT 68429 || ||||||| || ||| || |||||||| | |||||| |||||||| ||||| || Sbjct 19855 TGGATCTTTGATTTAACGTTATCAATGGTGTCAGATGATTCAACTTCCAAAGTGATAGTC 19796 Query 68430 TTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || || | || || || || || ||||| Sbjct 19795 TTACCAGTCAATGTTTTAACAAAGATTTGCAT 19764 Score = 140 bits (154), Expect = 6e-28 Identities = 129/165 (78%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| |||||||| || || || || ||||| ||||| || || || | || || ||||| Sbjct 19748 CAACACCAAGTGAAGWGTTGATTCCTTTTGRATGTTGTAGTCAGACAARGTTCTACCATC 19689 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 |||||| ||||| || ||||| || | |||||||||||| |||||||| |||||||| || Sbjct 19688 TTCTAATTGCTTACCAGCGAAAATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTATC 19629 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTAC 68413 ||| ||||| | ||| || || |||||||| | |||||| || Sbjct 19628 TTGWATCTTGGACTTAACATTGTCAATGGTGTCAGATGATTCGAC 19584 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921621040606960