Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ambrosiozyma_20monospora_20[genbank_20GCA_5F001599995.1_202016-03-
01] 118 sequences; 24,978,438 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq17 172 1e-37
seq3 161 2e-34
seq40 158 2e-33
>seq17
Length=626534
Score = 172 bits (190), Expect = 1e-37
Identities = 166/213 (78%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308
||| |||||||| || ||||| || ||||| ||||| || || || | || || |||||
Sbjct 620764 CAAAACCAAGTGAAGAGTGGATTCCTTTTGAATGTTGTAGTCAGACAAAGTTCTACCATC 620823
Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368
||| || ||||| || || || || | |||||||||||| ||||| || |||||||||||
Sbjct 620824 TTCCAATTGCTTACCAGCAAAAATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTTGTC 620883
Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428
||| ||||| | |||||| || |||||||| | ||||| || ||||| ||||||||
Sbjct 620884 TTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAGGATTCGACCTCCAAAGTGATGGT 620943
Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| || || |||||||| || || || |||||
Sbjct 620944 CTTACCTGTAAGGGTCTTAACAAAAATTTGCAT 620976
>seq3
Length=1000385
Score = 161 bits (178), Expect = 2e-34
Identities = 164/214 (77%), Gaps = 0/214 (0%)
Strand=Plus/Plus
Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308
||| |||||||| | ||||| || ||||| ||||| || ||||| | || || || ||
Sbjct 936308 CAAAACCAAGTGCAAAGTGGATTCCTTTTGAATGTTGTAGTCGGACAAGGTTCTACCGTC 936367
Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368
||| || ||||| ||||| || || | ||||||||| || ||||| || |||||||| ||
Sbjct 936368 TTCCAATTGCTTACCGGCAAAGATCAATCTTTGTTGATCAGGTGGGATACCTTCCTTATC 936427
Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428
||| ||||| | |||||| || |||||||| | ||||| ||||||||||| || ||
Sbjct 936428 TTGGATCTTGGACTTGACATTGTCAATGGTGTCGGAAGATTCAACTTCCAAGGTAATTGT 936487
Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462
|| || || | |||||| || || || ||||||
Sbjct 936488 CTTACCAGTCAAGGTCTTAACAAAAATTTGCATT 936521
>seq40
Length=167105
Score = 158 bits (174), Expect = 2e-33
Identities = 162/212 (76%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 68250 AATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCT 68309
|| |||||||| || || || || ||||||||||| || || || | || || ||||||
Sbjct 19975 AAAACCAAGTGAAGAGTTGATTCCTTTTGGATGTTGTAGTCAGACAARGTTCTACCATCT 19916
Query 68310 TCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCT 68369
||||| ||||| || ||||| || | ||| ||||| || |||||||| || ||||| |||
Sbjct 19915 TCTAATTGCTTACCAGCGAAAATTAATCTCTGTTGATCAGGTGGAATACCCTCCTTATCT 19856
Query 68370 TGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTT 68429
|| ||||||| || ||| || |||||||| | |||||| |||||||| ||||| ||
Sbjct 19855 TGGATCTTTGATTTAACGTTATCAATGGTGTCAGATGATTCAACTTCCAAAGTGATAGTC 19796
Query 68430 TTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| || || | || || || || || |||||
Sbjct 19795 TTACCAGTCAATGTTTTAACAAAGATTTGCAT 19764
Score = 140 bits (154), Expect = 6e-28
Identities = 129/165 (78%), Gaps = 0/165 (0%)
Strand=Plus/Minus
Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308
||| |||||||| || || || || ||||| ||||| || || || | || || |||||
Sbjct 19748 CAACACCAAGTGAAGWGTTGATTCCTTTTGRATGTTGTAGTCAGACAARGTTCTACCATC 19689
Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368
|||||| ||||| || ||||| || | |||||||||||| |||||||| |||||||| ||
Sbjct 19688 TTCTAATTGCTTACCAGCGAAAATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTATC 19629
Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTAC 68413
||| ||||| | ||| || || |||||||| | |||||| ||
Sbjct 19628 TTGWATCTTGGACTTAACATTGTCAATGGTGTCAGATGATTCGAC 19584
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921621040606960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |