Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ambrosiozyma_20monospora_20[genbank_20GCA_5F001599995.1_202016-03- 01] 118 sequences; 24,978,438 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq3 100 3e-16 seq17 89.7 5e-13 >seq3 Length=1000385 Score = 100 bits (110), Expect = 3e-16 Identities = 167/239 (70%), Gaps = 2/239 (1%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| ||| | |||||| || || | | || ||||||||||||||||||||| | Sbjct 936294 CCACCTCTCAATCTCAAAACCAAGTGCAAAGTGGATTCCTTTTGAATGTTGTAGTCGGAC 936353 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || | ||| || | ||| ||||||| | |||| | | ||||| || || || Sbjct 936354 AAGGTTCTACCGTCTTCCAATTGCTTACCGGCAAAGATCAATCTTTGTTGATCAGGTGGG 936413 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCAC 138566 |||||||| || || ||| || || | |||| || | |||||||| || || || Sbjct 936414 ATACCTTCCTTATCTTGGATCTTGGACTTGACATTG-TCAATGGTGTCGGAAGATTCAAC 936472 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATGGCTTATAATA 138625 || | || | || |||||||||| || || |||||||| ||||| | |||| || Sbjct 936473 TTCCAAGGTAATTGTCTTACCAGTCAAGGTCTTAACAAAAATTTGCATTGTCTATATTA 936531 >seq17 Length=626534 Score = 89.7 bits (98), Expect = 5e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| ||| | |||||| || || | | || |||||||||||||||||||| | Sbjct 620750 CCACCTCTCAATCTCAAAACCAAGTGAAGAGTGGATTCCTTTTGAATGTTGTAGTCAGAC 620809 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||| | || || | ||| ||||| | | | || | | |||||||| || || Sbjct 620810 AAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAAATCAATCTTTGTTGGTCAGGTGGG 620869 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCAC 138566 |||||||| ||||| ||| || || | |||| || | |||||| | || || || Sbjct 620870 ATACCTTCCTTGTCTTGGATCTTGGACTTGACATTG-TCAATGGTGTCAGAGGATTCGAC 620928 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||| | || | || ||||| || || || || |||||||| ||||| Sbjct 620929 CTCCAAAGTGATGGTCTTACCTGTAAGGGTCTTAACAAAAATTTGCAT 620976 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496261668012960