Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ambrosiozyma_20monospora_20[genbank_20GCA_5F001599995.1_202016-03- 01] 118 sequences; 24,978,438 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq3 109 5e-19 seq40 102 7e-17 seq17 102 7e-17 >seq3 Length=1000385 Score = 109 bits (120), Expect = 5e-19 Identities = 153/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185 ||||| || | |||| || ||||||||||| || || || ||| | |||| || Sbjct 936306 CTCAAAACCAAGTGCAAAGTGGATTCCTTTTGAATGTTGTAGTCGGACAAGGTTCTACCG 936365 Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245 || |||||||| || || || | ||||||| ||| || || || || || ||||| ||| Sbjct 936366 TCTTCCAATTGCTTACCGGCAAAGATCAATCTTTGTTGATCAGGTGGGATACCTTCCTTA 936425 Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305 ||||| || || |||| || | |||||||||||| || ||||| | |||| Sbjct 936426 TCTTGGATCTTGGACTTGACATTGTCAATGGTGTCGGAAGATTCAACTTCCAAGGTAATT 936485 Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || || || | || || |||||||||||||| Sbjct 936486 GTCTTACCAGTCAAGGTCTTAACAAAAATTTGCAT 936520 >seq40 Length=167105 Score = 102 bits (112), Expect = 7e-17 Identities = 146/204 (72%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGT 45197 || || ||||||||||||||||| || || || | ||| || ||| || ||||| Sbjct 19966 TGAAGAGTTGATTCCTTTTGGATGTTGTAGTCAGACAARGTTCTACCATCTTCTAATTGC 19907 Query 45198 TTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTT 45257 || || ||| | || |||| || || || || ||||| || || |||||||| | | || Sbjct 19906 TTACCAGCGAAAATTAATCTCTGTTGATCAGGTGGAATACCCTCCTTATCTTGGA-TCTT 19848 Query 45258 TGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGT 45316 || || | || | || | |||||| || || || ||||| | ||| | || || || || Sbjct 19847 TGATTTAACGTTATCAATGGTGTCAGATGATTCAACTTCCAAAGTGATAGTCTTACCAGT 19788 Query 45317 TAGAGTTTTTACAAAAATTTGCAT 45340 | ||||| ||||| |||||||| Sbjct 19787 CAATGTTTTAACAAAGATTTGCAT 19764 Score = 93.3 bits (102), Expect = 4e-14 Identities = 98/131 (75%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185 |||||||| | || || |||||||||||||| || || || || | ||| || | Sbjct 19750 CTCAACACCAAGTGAAGWGTTGATTCCTTTTGRATGTTGTAGTCAGACAARGTTCTACCA 19691 Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245 || || ||||| || || ||| | ||||||| ||| ||||| || ||||| ||||| ||| Sbjct 19690 TCTTCTAATTGCTTACCAGCGAAAATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTA 19631 Query 45246 TCTTGAATTTT 45256 ||||| || || Sbjct 19630 TCTTGWATCTT 19620 >seq17 Length=626534 Score = 102 bits (112), Expect = 7e-17 Identities = 152/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185 ||||| || | || || || ||||||||||| || || || || | ||| || | Sbjct 620762 CTCAAAACCAAGTGAAGAGTGGATTCCTTTTGAATGTTGTAGTCAGACAAAGTTCTACCA 620821 Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245 || |||||||| || || || | ||||||| ||| ||||| || || || ||||| || Sbjct 620822 TCTTCCAATTGCTTACCAGCAAAAATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTTG 620881 Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305 ||||| || || |||| || | |||||| || || ||||| || | ||| | Sbjct 620882 TCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAGGATTCGACCTCCAAAGTGATG 620941 Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341 || || || || || || || ||||||||||||||| Sbjct 620942 GTCTTACCTGTAAGGGTCTTAACAAAAATTTGCATC 620977 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 452002533295280