Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ambrosiozyma_20monospora_20[genbank_20GCA_5F001599995.1_202016-03-
01] 118 sequences; 24,978,438 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq3 109 5e-19
seq40 102 7e-17
seq17 102 7e-17
>seq3
Length=1000385
Score = 109 bits (120), Expect = 5e-19
Identities = 153/215 (71%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185
||||| || | |||| || ||||||||||| || || || ||| | |||| ||
Sbjct 936306 CTCAAAACCAAGTGCAAAGTGGATTCCTTTTGAATGTTGTAGTCGGACAAGGTTCTACCG 936365
Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245
|| |||||||| || || || | ||||||| ||| || || || || || ||||| |||
Sbjct 936366 TCTTCCAATTGCTTACCGGCAAAGATCAATCTTTGTTGATCAGGTGGGATACCTTCCTTA 936425
Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305
||||| || || |||| || | |||||||||||| || ||||| | ||||
Sbjct 936426 TCTTGGATCTTGGACTTGACATTGTCAATGGTGTCGGAAGATTCAACTTCCAAGGTAATT 936485
Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || || || | || || ||||||||||||||
Sbjct 936486 GTCTTACCAGTCAAGGTCTTAACAAAAATTTGCAT 936520
>seq40
Length=167105
Score = 102 bits (112), Expect = 7e-17
Identities = 146/204 (72%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGT 45197
|| || ||||||||||||||||| || || || | ||| || ||| || |||||
Sbjct 19966 TGAAGAGTTGATTCCTTTTGGATGTTGTAGTCAGACAARGTTCTACCATCTTCTAATTGC 19907
Query 45198 TTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTT 45257
|| || ||| | || |||| || || || || ||||| || || |||||||| | | ||
Sbjct 19906 TTACCAGCGAAAATTAATCTCTGTTGATCAGGTGGAATACCCTCCTTATCTTGGA-TCTT 19848
Query 45258 TGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGT 45316
|| || | || | || | |||||| || || || ||||| | ||| | || || || ||
Sbjct 19847 TGATTTAACGTTATCAATGGTGTCAGATGATTCAACTTCCAAAGTGATAGTCTTACCAGT 19788
Query 45317 TAGAGTTTTTACAAAAATTTGCAT 45340
| ||||| ||||| ||||||||
Sbjct 19787 CAATGTTTTAACAAAGATTTGCAT 19764
Score = 93.3 bits (102), Expect = 4e-14
Identities = 98/131 (75%), Gaps = 0/131 (0%)
Strand=Plus/Minus
Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185
|||||||| | || || |||||||||||||| || || || || | ||| || |
Sbjct 19750 CTCAACACCAAGTGAAGWGTTGATTCCTTTTGRATGTTGTAGTCAGACAARGTTCTACCA 19691
Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245
|| || ||||| || || ||| | ||||||| ||| ||||| || ||||| ||||| |||
Sbjct 19690 TCTTCTAATTGCTTACCAGCGAAAATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTA 19631
Query 45246 TCTTGAATTTT 45256
||||| || ||
Sbjct 19630 TCTTGWATCTT 19620
>seq17
Length=626534
Score = 102 bits (112), Expect = 7e-17
Identities = 152/216 (70%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185
||||| || | || || || ||||||||||| || || || || | ||| || |
Sbjct 620762 CTCAAAACCAAGTGAAGAGTGGATTCCTTTTGAATGTTGTAGTCAGACAAAGTTCTACCA 620821
Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245
|| |||||||| || || || | ||||||| ||| ||||| || || || ||||| ||
Sbjct 620822 TCTTCCAATTGCTTACCAGCAAAAATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTTG 620881
Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305
||||| || || |||| || | |||||| || || ||||| || | ||| |
Sbjct 620882 TCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAGGATTCGACCTCCAAAGTGATG 620941
Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341
|| || || || || || || |||||||||||||||
Sbjct 620942 GTCTTACCTGTAAGGGTCTTAACAAAAATTTGCATC 620977
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 452002533295280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |