Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ambrosiozyma_20monospora_20[genbank_20GCA_5F001599995.1_202016-03- 01] 118 sequences; 24,978,438 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq58 131 2e-25 >seq58 Length=80238 Score = 131 bits (144), Expect = 2e-25 Identities = 271/399 (68%), Gaps = 12/399 (3%) Strand=Plus/Plus Query 154722 TTGATACCAGAGTCAGCACATGGAACTAATCCTGCTAGTGCTGTCATGGCAGGGATGAAA 154781 ||||| || | |||||| ||||| |||||||| || ||||| ||||| || ||||| Sbjct 15672 TTGATTCCTGTGTCAGCCCATGGTACTAATCCAGCCTCTGCTGCTATGGCCGGTTTGAAA 15731 Query 154782 GTTGTAGGTGTCAAGTGTGATGATGATGGTAACATAGACATCAAAGATCTAGAGAAGAAA 154841 ||||| ||| || ||| | |||||||| | || | ||||| || | ||| Sbjct 15732 GTTGTTCCTGTGAAATGTTTAAGTAATGGTAACTTGGATTTGGCCGATCT-GAAAGTAAA 15790 Query 154842 GC-----AATCATGAATACATTTGAACTGTCATGTATTATGATTACATACCCATCTACAC 154896 | || |||| | | | | ||| ||| ||||||||| || ||||||||| Sbjct 15791 GGTTGAAAAACATGCGGAAAACTTAGCTGCCAT----TATGATTACTTATCCATCTACAT 15846 Query 154897 ATGGTGTATTTGAAACTAACATTAGA-CAGATATGTAAGATCGTTCATGACAATGGTGGT 154955 ||||| | || || | | |||||| | | | | || | |||||| ||| ||| Sbjct 15847 ATGGTCTGTTCGAGCCAACAATTAGAACTGCTGTTGAAT-TGGTTCATACTGCTGGAGGT 15905 Query 154956 CAGGTATATCTTGATGGAGCAAATCTAAATGCACAGGTAGGACTAGCAAAACCATGTGAG 155015 || || || | ||||| || || | ||||| || || ||| || | ||| |||| Sbjct 15906 CAAGTTTACATGGATGGTGCCAACATGAATGCCCAAGTGGGATTAACTTCTCCAGGTGAT 15965 Query 155016 TATGGTGCAGATGTATGTCATCTAAACTTACATAAAACATTCTGTATTCCACATGGAGGT 155075 | ||||| ||||| ||||| ||||||||||||| ||||| || || || || ||| Sbjct 15966 TTGGGTGCTGATGTTTGTCACTTAAACTTACATAAGACATTTGCCATACCTCACGGTGGT 16025 Query 155076 GGAGGTCCTGGCGTAGGTCCTATAGGTGTAGCAAAACAT 155114 |||||||| || || ||||| || |||| || ||||| Sbjct 16026 GGAGGTCCAGGTGTGGGTCCAATTTGTGTTGCTGAACAT 16064 Score = 116 bits (128), Expect = 4e-21 Identities = 159/222 (72%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 153207 ATAGGTCAAGGATACTATGGAACCATTACACCCCCAGTCATACAGCGAAACGTTCTTGAG 153266 || ||| |||| ||||||||||| || ||| ||||| || ||||| | | || Sbjct 14115 ATTGGTAAAGGTTACTATGGAACAATCCTACCTGGTGTCATTCAAAGAAACTTGTTAGAA 14174 Query 153267 AATCCTAGTTGGTACACATCTTACACTCCCTATCAAGCTGAGATATCTCAGGGAAGATTG 153326 || || |||||| || ||||||||||| |||||| |||| | ||||| || ||||| Sbjct 14175 AACCCAGCTTGGTATACTTCTTACACTCCTTATCAACCTGAAGTTTCTCAAGGTAGATTA 14234 Query 153327 GAAGCTTTATTCAATTACCAAACGCTCATCACAGAACTTACAGGATTACCAATAGCAAAC 153386 || |||||| ||||||||||| | || | || | || || || ||| | || ||| Sbjct 14235 GAGAGTTTATTGAATTACCAAACCGTTGTCTCTGACTTAACTGGCTTGCCAGTTGCTAAC 14294 Query 153387 GCATCTCTATTAGATGAAGCAACTGCAGCAGCAGAAGCAATG 153428 | ||| | |||||||||| || || || || ||||| ||| Sbjct 14295 TCTTCTTTGTTAGATGAAGGTACAGCTGCTGCTGAAGCCATG 14336 Score = 114 bits (126), Expect = 1e-20 Identities = 195/280 (70%), Gaps = 2/280 (1%) Strand=Plus/Plus Query 153746 TGATATTGCTGTAGG-TAGTATGCAAAGGTTTGGTATTCCTATGGGATATGGAGGTCCTC 153804 |||||||| | |||| | || | ||||| |||||| | || ||||||| || ||||||| Sbjct 14678 TGATATTGTTTTAGGATCGTCT-CAAAGATTTGGTGTCCCAATGGGATTCGGTGGTCCTC 14736 Query 153805 ATGCTGCATTCTTTGCAACAACAGACAAGTATAAGAGAAAGATACCTGGCAGAATTGTAG 153864 |||||||||||||||| || | || | | ||||| || || || ||| | || | Sbjct 14737 ATGCTGCATTCTTTGCTGTCACCCAAAAATTGCAAAGAAAAATGCCAGGTAGATTGGTTG 14796 Query 153865 GTCAGTCAGTAGATAGTGAAGGTAATAAAGCATACAGATTAGCACTACAGACTAGAGAGC 153924 || || |||||| |||||| |||| | ||||| || | || || ||||| | Sbjct 14797 GTGTCTCCAAAGATAGATTGGGTAATCAAGCTTTAAGATTGGCTTTGCAAACAAGAGAAC 14856 Query 153925 AGCATATCAGGAGAGACAAAGCAACCAGTAACATCTGCACAGCTCAGGCACTGCTGGCTA 153984 | || || | |||||| || || || ||||| || || ||||| || || |||||| Sbjct 14857 AACACATTAAGAGAGAAAAGGCTACTTCCAACATTTGTACCGCTCAAGCTTTGTTGGCTA 14916 Query 153985 ATATGTCTGGATTCTATGCAGCATATCATGGTGCAGATGG 154024 | || || | ||||| | || ||||||| ||||| Sbjct 14917 ACATTGTTGCAAATTATGCTGTCTACCATGGTGTTGATGG 14956 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579211945661120