Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ambrosiozyma_20monospora_20[genbank_20GCA_5F001599995.1_202016-03- 01] 118 sequences; 24,978,438 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq58 140 4e-28 >seq58 Length=80238 Score = 140 bits (154), Expect = 4e-28 Identities = 273/399 (68%), Gaps = 12/399 (3%) Strand=Plus/Plus Query 159397 TTGATACCAGAGTCAGCACATGGAACTAATCCTGCATCAGCAGTGATGGCAGGGATGAAA 159456 ||||| || | |||||| ||||| |||||||| || || || | ||||| || ||||| Sbjct 15672 TTGATTCCTGTGTCAGCCCATGGTACTAATCCAGCCTCTGCTGCTATGGCCGGTTTGAAA 15731 Query 159457 GTTGTAGGTGTCAAGTGTGATGATGATGGCAACATAGACATCAAAGATCTAGAGAAGAAA 159516 ||||| ||| || ||| | |||| ||| | || | ||||| || | ||| Sbjct 15732 GTTGTTCCTGTGAAATGTTTAAGTAATGGTAACTTGGATTTGGCCGATCT-GAAAGTAAA 15790 Query 159517 GC-----AATCATGAATACATTTGAACTGTCATGTATTATGATTACATATCCATCTACAC 159571 | || |||| | | | | ||| ||| ||||||||| |||||||||||| Sbjct 15791 GGTTGAAAAACATGCGGAAAACTTAGCTGCCAT----TATGATTACTTATCCATCTACAT 15846 Query 159572 ATGGTGTATTTGAAACAAACATCAGACAGATATGTAAGATTG-TTCATGAGAATGGTGGT 159630 ||||| | || || ||| || ||| | ||| |||| ||||| ||| ||| Sbjct 15847 ATGGTCTGTTCGAGCCAACAATTAGA-ACTGCTGTTGAATTGGTTCATACTGCTGGAGGT 15905 Query 159631 CAGGTATATCTTGATGGTGCAAATCTAAATGCACAGGTAGGTCTAGCAAAACCATGTGAC 159690 || || || | |||||||| || | ||||| || || || || | ||| |||| Sbjct 15906 CAAGTTTACATGGATGGTGCCAACATGAATGCCCAAGTGGGATTAACTTCTCCAGGTGAT 15965 Query 159691 TATGGTGCAGATGTATGTCATCTAAACTTACATAAGACATTCTGTATTCCACATGGAGGT 159750 | ||||| ||||| ||||| ||||||||||||||||||| || || || || ||| Sbjct 15966 TTGGGTGCTGATGTTTGTCACTTAAACTTACATAAGACATTTGCCATACCTCACGGTGGT 16025 Query 159751 GGAGGTCCTGGCGTAGGTCCTATTGGTGTAGCAAAACAT 159789 |||||||| || || ||||| ||| |||| || ||||| Sbjct 16026 GGAGGTCCAGGTGTGGGTCCAATTTGTGTTGCTGAACAT 16064 Score = 113 bits (124), Expect = 5e-20 Identities = 158/222 (71%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 157882 ATAGGTCAAGGATACTATGGAACCATCACACCCCCAGTCATACAGCGAAACGTTCTTGAG 157941 || ||| |||| ||||||||||| ||| ||| ||||| || ||||| | | || Sbjct 14115 ATTGGTAAAGGTTACTATGGAACAATCCTACCTGGTGTCATTCAAAGAAACTTGTTAGAA 14174 Query 157942 AATCCTAGTTGGTACACATCTTACACTCCCTATCAAGCTGAGATATCTCAGGGAAGATTG 158001 || || |||||| || ||||||||||| |||||| |||| | ||||| || ||||| Sbjct 14175 AACCCAGCTTGGTATACTTCTTACACTCCTTATCAACCTGAAGTTTCTCAAGGTAGATTA 14234 Query 158002 GAAGCTTTATTCAATTACCAAACGCTCATCACAGAACTCACAGGACTACCGATAGCAAAC 158061 || |||||| ||||||||||| | || | || | || || | || | || ||| Sbjct 14235 GAGAGTTTATTGAATTACCAAACCGTTGTCTCTGACTTAACTGGCTTGCCAGTTGCTAAC 14294 Query 158062 GCATCTCTATTAGATGAAGCAACTGCAGCAGCAGAAGCAATG 158103 | ||| | |||||||||| || || || || ||||| ||| Sbjct 14295 TCTTCTTTGTTAGATGAAGGTACAGCTGCTGCTGAAGCCATG 14336 Score = 105 bits (116), Expect = 8e-18 Identities = 193/280 (69%), Gaps = 2/280 (1%) Strand=Plus/Plus Query 158421 TGACATTGCTGTAGG-TAGTATGCAAAGGTTTGGTATTCCTATGGGATACGGAGGTCCTC 158479 ||| |||| | |||| | || | ||||| |||||| | || ||||||| ||| ||||||| Sbjct 14678 TGATATTGTTTTAGGATCGTCT-CAAAGATTTGGTGTCCCAATGGGATTCGGTGGTCCTC 14736 Query 158480 ATGCTGCATTCTTTGCAACAACAGACAAGTATAAGAGAAAGATACCTGGCAGAATTGTAG 158539 |||||||||||||||| || | || | | ||||| || || || ||| | || | Sbjct 14737 ATGCTGCATTCTTTGCTGTCACCCAAAAATTGCAAAGAAAAATGCCAGGTAGATTGGTTG 14796 Query 158540 GTCAGTCAGTAGATAGCGAAGGTAATAAAGCATACAGATTAGCACTACAGACTAGAGAGC 158599 || || |||||| |||||| |||| | ||||| || | || || ||||| | Sbjct 14797 GTGTCTCCAAAGATAGATTGGGTAATCAAGCTTTAAGATTGGCTTTGCAAACAAGAGAAC 14856 Query 158600 AGCATATCAGAAGAGACAAAGCAACCAGTAACATCTGCACAGCACAAGCACTGCTGGCTA 158659 | || || | ||||| || || || ||||| || || || ||||| || |||||| Sbjct 14857 AACACATTAAGAGAGAAAAGGCTACTTCCAACATTTGTACCGCTCAAGCTTTGTTGGCTA 14916 Query 158660 ATATGTCTGGGTTCTATGCAGCATATCATGGTGCAGATGG 158699 | || || ||||| | || ||||||| ||||| Sbjct 14917 ACATTGTTGCAAATTATGCTGTCTACCATGGTGTTGATGG 14956 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588050332624480