Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ambrosiozyma_20monospora_20[genbank_20GCA_5F001599995.1_202016-03-
01] 118 sequences; 24,978,438 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq3 163 6e-35
seq17 152 1e-31
seq40 141 2e-28
>seq3
Length=1000385
Score = 163 bits (180), Expect = 6e-35
Identities = 172/224 (77%), Gaps = 2/224 (1%)
Strand=Plus/Plus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAG 194977
||| | ||||||||| | ||| | |||||| || |||||||| ||||| |||| |||| |
Sbjct 936299 TCTCAATCTCAAAACCAAGTGCAAAGTGGATTCCTTTTGAATGTTGTAGTCGGACAAG-G 936357
Query 194978 TTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGC 195037
|||| || ||||| | |||||||| || ||||| | || |||||| || || || || |
Sbjct 936358 TTCTACCGTCTTCCAATTGCTTACCGGCAAAGATCAATCTTTGTTGATCAGGTGGGATAC 936417
Query 195038 CTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAA 195097
|||| || ||||| || || |||||| || ||||||||||| ||| ||| ||||| |
Sbjct 936418 CTTCCTTATCTTGGATCTTGGACTTGACATTGTCAATGGTGTCGGAAGATTCAACTTCCA 936477
Query 195098 GGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATT 195141
||||| ||||| || ||||| || || || || | |||||||
Sbjct 936478 AGGTAATTGTCTTACCAGTCAAGGTCTTAACAAAAATTTGCATT 936521
>seq17
Length=626534
Score = 152 bits (168), Expect = 1e-31
Identities = 167/222 (75%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
||| | ||||||||| | |||||||||||| || |||||||| ||||| || | | |||
Sbjct 620755 TCTCAATCTCAAAACCAAGTGAAGAGTGGATTCCTTTTGAATGTTGTAGTCAGACAAAGT 620814
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
||| |||||||| | |||||||| || || || | || ||||||||| || || || ||
Sbjct 620815 TCTACCATCTTCCAATTGCTTACCAGCAAAAATCAATCTTTGTTGGTCAGGTGGGATACC 620874
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098
||| |||||||| || || |||||| || ||||||||||| || ||| || || |
Sbjct 620875 TTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAGGATTCGACCTCCAA 620934
Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| | ||||| ||||| | || || || || | ||||||
Sbjct 620935 AGTGATGGTCTTACCTGTAAGGGTCTTAACAAAAATTTGCAT 620976
>seq40
Length=167105
Score = 141 bits (156), Expect = 2e-28
Identities = 164/222 (74%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
||| | ||| ||||| | ||||||||| || || ||||| || ||||| || | | ||
Sbjct 19985 TCTCAATCTTAAAACCAAGTGAAGAGTTGATTCCTTTTGGATGTTGTAGTCAGACAARGT 19926
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
||| |||||||| | |||||||| ||||| || | || ||||| || || ||||| ||
Sbjct 19925 TCTACCATCTTCTAATTGCTTACCAGCGAAAATTAATCTCTGTTGATCAGGTGGAATACC 19866
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098
|| || ||||| || ||| || ||||| ||||||||||| || ||| ||||| |
Sbjct 19865 CTCCTTATCTTGGATCTTTGATTTAACGTTATCAATGGTGTCAGATGATTCAACTTCCAA 19806
Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| | ||||| || ||||| ||||| || || | ||||||
Sbjct 19805 AGTGATAGTCTTACCAGTCAATGTTTTAACAAAGATTTGCAT 19764
Score = 125 bits (138), Expect = 2e-23
Identities = 125/165 (76%), Gaps = 0/165 (0%)
Strand=Plus/Minus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
||| | |||||| || | |||||| || || || ||||| || ||||| || | | ||
Sbjct 19757 TCTCAATCTCAACACCAAGTGAAGWGTTGATTCCTTTTGRATGTTGTAGTCAGACAARGT 19698
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
||| |||||||| | |||||||| ||||| || | || ||||||||| || ||||| ||
Sbjct 19697 TCTACCATCTTCTAATTGCTTACCAGCGAAAATCAATCTTTGTTGGTCAGGTGGAATACC 19638
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGA 195083
||| || ||||| || || ||| || || ||||||||||| ||
Sbjct 19637 TTCCTTATCTTGWATCTTGGACTTAACATTGTCAATGGTGTCAGA 19593
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1109479922602506
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |