Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ambrosiozyma_20monospora_20[genbank_20GCA_5F001599995.1_202016-03- 01] 118 sequences; 24,978,438 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq23 369 4e-97 seq17 208 9e-49 >seq23 Length=373761 Score = 369 bits (408), Expect = 4e-97 Identities = 1200/1862 (64%), Gaps = 43/1862 (2%) Strand=Plus/Minus Query 46971 TCTTTTTCCACAGTAAACTTAATTGGATTACTCGCTGATTTTGTTCGTAAATAATACATA 47030 ||||| || || ||||| | ||| | | | || | || |||| || |||||||||| Sbjct 129906 TCTTTATCAACTGTAAATTGAATGGCAGCAGCGGCAGCTTGAGTTCTTAGATAATACATA 129847 Query 47031 CCAGTCTTTAAACCTAAACTCCATCCATAGAAATGCATACTAGTTAATTTAGA-ATAACT 47089 |||||||| ||||| |||| || ||||||||||| ||| || ||| || | Sbjct 129846 CCAGTCTTCAAACCCTTCTTCCAACCGTAGAAATGCATGGAAGTCAACTTACCCATGGTT 129787 Query 47090 AGGTTCTGAAATATGAATATTAAGAGATTGACTCTGATCAATAAATGCACCTCTATCAGC 47149 |||||| || ||||| || | |||||| ||||| | | |||||||| ||||| Sbjct 129786 GGGTTCTTCAAG-TGAATGTTCAAAGATTGGGATTGATCGACGTAAGCACCTCTGTCAGC 129728 Query 47150 TGCCATATCTAAAATAACCCTTTGTGGTATCTCCCATACTGTTTTATAAATTTGTTTAAT 47209 | |||||| | |||| || |||| | || ||||| || || || ||||| | ||| | Sbjct 129727 AGACATATCAATAATAGCCTTTTGAGAAATTTCCCACACAGTCTTGTAAATCTTTTTCAA 129668 Query 47210 GTCTTCTGGGAGATTAGTA---TTTTGAATAGATCCTCCgttttct---ataattttgtt 47263 || || || | ||||| |||||||| || || ||| || ||||| ||| Sbjct 129667 TTCATCAGGAACATTAGGCAAGTTTTGAATGGAACC---GTTATCAGAAATAATGAAGTT 129611 Query 47264 ttttaattcatttgaccaaagttttc-gttcagttaatgtttttaaAAGATGAGGATTAA 47322 || | | || |||||| ||| | ||| || | ||| | || || | Sbjct 129610 CTTCATGTTATCATCCCAAAGACCCAAGTTAACCAAATCCTTCAACAAG-TATGGGTTGA 129552 Query 47323 CAATTTGAAATTCTCCAGATAGTACTCTACGGCTATATATATTACTTGTATATGGTTCTA 47382 ||||||| ||||| |||| | ||||| | || || || || ||||| || | Sbjct 129551 CAATTTGGAATTCACCAGCCAAGACTCTTCTAGAGTAAATGTTGGAGGTGTATGGCTCGA 129492 Query 47383 TAGATTCATTATTTCCAAAAATTTGAGCAGTTGATGCTGTAGGCATGGATGCAACTAATA 47442 | ||||||| | || || ||||||| ||| || || || ||||| | || | || | Sbjct 129491 AACATTCATTGTAACCCAAGATTTGAGAAGTGGAAGCAGTTGGCATTGGAGCTAACAACA 129432 Query 47443 AGCTATTTCTTACTCCATATTTTTGTATCTNNNNNNNNNNNNGTTTCCAATCCCAAAGAT 47502 | ||||||| || | || || | | ||| ||||| | || Sbjct 129431 ATGAGTTTCTTAAACCGTGCTTGACAATGTCTTCCTTCAAAGAATCCCACTCCCATAAAT 129372 Query 47503 CTGATGGAACAACATTCCAAAAATCATATTGAAGAATTCCTTTACTTATCGGAGAACCAT 47562 | | ||| | ||| |||||| |||| | | ||||| | ||||| || | Sbjct 129371 CAGTTGGCTTCTTACCCCATAAATCAAATTGCAATAATCCTTGAGAAGCTGGAGAGCCCT 129312 Query 47563 TATATGTTTTATAAGGACCGTATAGTTTAGCGAGTTCACAACTTGCTTCCAATGCACTAT 47622 || | |||| ||| | ||| | | || || | |||| | |||||||| | | Sbjct 129311 TAAAAGTTTCATATGCACCTTCTTCCTTGGCCAATTCAACAGAAGCTTCCAAACCGGCGT 129252 Query 47623 AATATATTGTTTCAAATATTTTTATGTTTAGATTCCTT-GCTTCTGATGATTCAAAAGGA 47681 ||| | ||||| || |||| ||||| | | || || ||||| | || ||||| ||| Sbjct 129251 GATACAAAGTTTCGAAGATTTGAATGTTCA-ACTCTTTAGCTTCAGGGGAATCAAATGGA 129193 Query 47682 TANNNNNNNNNNNNNAATGTATCTGCCAATCCTTGAACACCAATACCAATTGGTCTATGA 47741 || ||||| || || ||||||||||| | | |||||||||| | Sbjct 129192 ATTCTCAATTGCATGAAAGTATCGGCTAAACCTTGAACACCTAAAGCAATTGGTCTGTTT 129133 Query 47742 GTTTTATTAGAAAA-CT--CAGCTTCTGGTAATGGATATTTGTTTATATCTATAATTTTA 47798 | | || || || ||| ||| | ||| || | |||| | || ||||| || Sbjct 129132 CTCATGTTGGATCTTCTAGCAGTTTCA---ACTGGGTAGTAGTTTCTGTCAATAATCTTG 129076 Query 47799 TTTAGANNNNNNNNNNNNNNNNNNACAATTTCTCTTAATTTATTAAAATCAAACT----- 47853 || | |||| || ||||| || || ||| || Sbjct 129075 TTCAAGTTCTTGGTGACCACCTTGGCAATCTCATGCAATTTCTTGAAGTCATACCAGCAA 129016 Query 47854 ----TGTTATTTA---TAACAAAC-CTATTAAGTGCTATAGATGCTAGATTACATACAGC 47905 ||| || | ||||||| || || || | ||| || | ||||| ||||| Sbjct 129015 GTAGTGTCATCAAAAGTAACAAAGGCTGGCAAA-GCAACAGAAGCCAAGTTACAAACAGC 128957 Query 47906 TACCTCATTTGGATTAGTATATTGTATTATTTCAGCACATAGATTACCACATTTGATAGT 47965 ||| |||| | | ||||| | |||||| ||| | || | |||||| Sbjct 128956 AGTTTCAGTTGGGTCGGAATATTCAACAATTTCACAACACAAGTTGGATGACTTGATAAC 128897 Query 47966 ACCCAAATTTTGATGATTATTNNNNTTGTTACATGCGTCCTTGTAAAGCATAAAAGGTGT 48025 |||||| || | || ||| |||||||| || || ||||| | ||| ||||| || Sbjct 128896 ACCCAAGTTCTTTTGGTTAGACTTTTTGTTACAAGCATCTTTGTACAACATGAAAGGAGT 128837 Query 48026 TCCAGTTTCTATCTGAGATTCAATGATAGATTTCCAAACAGTCCTAGCCTTTATAACAGC 48085 |||||||| | |||| ||| | ||| || | ||| | | |||||| | | | Sbjct 128836 ACCAGTTTCAGTTTGAGCTTCCAAGATGGAGTACCACAACTTTTGAGCCTTAACAGTGGT 128777 Query 48086 TCTAGCTTTATTATCATGTTCGTATTTAGTATATAACTTCTCAAATTCATCCCCATACAC 48145 |||| || || ||| ||| || || || || ||||||||||| ||||| ||||| || Sbjct 128776 TCTACCTCTACCTTCAGTTTCATACTTGGTGTACAACTTCTCAAACTCATCACCATAAAC 128717 Query 48146 ATTATCTAACCCAGGACATTCATTAGGACACATCAATGACCAATCCTCATCATTTTTTAC 48205 | | ||| || ||| ||| ||| | | ||| | ||| || || | || || Sbjct 128716 CTCAGATAAACCTGGAGCATCAGAAGGTGAGAACAAAGTCCATTCAGAATTAGATTCAAC 128657 Query 48206 TCTAGTCATAAATATATCTGGTATCCAAAGAGCTATAAATAAATCCCTAGTTCTTAGTTC 48265 ||| |||| || | |||||| ||||| | |||| || ||||| || | ||| | ||| Sbjct 128656 TCTCTTCATGAACAAATCTGGAATCCACAAAGCTGGGAACAAATCTCTGGCTCTGATTTC 128597 Query 48266 TTCATTGCCACTATTCCTTTTAAGTTCAAGAAAGTCCATTATATCAGCATGCCATGGTTC 48325 ||| || || |||| || | | |||| |||||| | || ||||| ||||||||||| Sbjct 128596 TTCTTTACCGTGATTCTTTCTGATATCAATAAAGTCAAAGATGTCAGCGTGCCATGGTTC 128537 Query 48326 TAAATATATTGCCATTACACCTGGTCGTTTATTACCTCCTTGATCTATATATCTGGCAGT 48385 | ||| | || | |||| |||| || ||||| |||||||| | |||||| ||||| Sbjct 128536 AATATAAAGGGCAAAAGCACCAGGTCTCTTGTTACCACCTTGATCAACATATCTAGCAGT 128477 Query 48386 ATTGTTATAAACTCTTAACATTGGGACAATACCATTTGATATACCATTGGTTCCCGAAAT 48445 |||||| ||||||| | ||| || | ||||||||||| |||| ||||| || | || Sbjct 128476 ATTGTTGAAAACTCTAACCATAGGAATGATACCATTTGAAGTACCGTTGGTACCGGCGAT 128417 Query 48446 ATAACTTCCACTAGCTCTTATATTACTAATTGAAATACCTATACCACCTGCCATTTTAGA 48505 ||| ||| | ||||| || || ||| | ||| ||||||||||| | ||||| Sbjct 128416 GTAAGAACCAGTGGCTCTAATGTTGTGAATGTGTAGACCAATACCACCTGCAGTCTTAGA 128357 Query 48506 TATTAGAGCACACCGTTTAAGGGTATCATAAATTCCTTCTATACTATCATCTATCATATT 48565 || ||||||||| || | ||||||||||| ||||| ||| ||| || |||| Sbjct 128356 AATCAGAGCACACTCCTTCAATGTATCATAAATACCTTCAATAGAATCTTCCTTCATGGC 128297 Query 48566 TAATAGAAAACAACTAGACATTTGCGGATGACAAGTTCCTGAATTAAATAATGTTGGAGA 48625 | | |||||| |||||||| || || ||| || | ||||| || |||||||| Sbjct 128296 AACCAAGAAACAAGAGGACATTTGTGGGCGAGGAGTACCAGCGTTAAACAAAGTTGGAGA 128237 Query 48626 TGCATGAATAAACCATTTCTCTGATAACAATTTATATGTTTCAATAAC----AGAATCTA 48681 ||||| | || || | | || | ||| || || || || | ||| |||| | Sbjct 128236 AGCATGGGTGAAATATCTTTGGGACATCAAGTTGTAAGTCTCTAAAACTTTAGGAATGT- 128178 Query 48682 TATCCCATTGATGTATACCTATAGATACACGCATTAACATATATTGAGGTCTTTCAACAA 48741 |||| | ||| ||||| || | || | ||| | || || ||| ||||||||| ||| Sbjct 128177 TATCACCGTGA---ATACCAATGGCAACTCTCATGATCAAATGTTGTGGTCTTTCAGCAA 128121 Query 48742 TTTTGTTATTTATTTTCAAAAGATATGATTTTTCCAATGTTTTAAAACCAAAATAGTTGT 48801 || || ||| |||||||||| ||| ||||||| || || ||||| |||||||||| Sbjct 128120 CCTTACCATCAATTCTCAAAAGATAGGATCTTTCCAAAGTCTTGAAACCGAAATAGTTGT 128061 Query 48802 AT 48803 || Sbjct 128060 AT 128059 >seq17 Length=626534 Score = 208 bits (230), Expect = 9e-49 Identities = 1179/1880 (63%), Gaps = 73/1880 (4%) Strand=Plus/Minus Query 47013 GTTCGTAAATAATACATACCAGTCTTTAAACCTAAACTCCATCCATAGAAATGCATACTA 47072 |||| || ||||| ||||||||||| | ||| || ||| ||||||||||||| || Sbjct 355334 GTTCTCAAGTAATATATACCAGTCTTGAGCCCTTTACCCCAGGCATAGAAATGCATGCTT 355275 Query 47073 GTTAATTTAGAATAACTAGGTTCTGAAATATGAATA--TTAAGAGATTGACTCTGATCAA 47130 || || ||||| | |||| | | ||||||| || | ||| ||||||| Sbjct 355274 GTCAACTTAGACATGGTTGGTTGTTTA--ATGAATAAGTTCATGCTCTGAGATTGATCAA 355217 Query 47131 TAAATGCACCTCTATCAGCTGCCATATCTAAAATAACCCTTTGTGGTATCTCCCATACTG 47190 |||| | |||| ||||| |||||||| | | ||| |||| | |||||||| |||| Sbjct 355216 TAAAAGGTGCTCTGTCAGCAGCCATATCAATGACAACTTTTTGAGACATCTCCCAAACTG 355157 Query 47191 TTTTATAAATTTGTTT--AATGTCTTCTGGGAGATT---AGTATTTTGAATAGATCCTCC 47245 || | || | | ||| |||| || ||| | ||| | | |||||||| ||||| Sbjct 355156 TTCTGTACAATGATTTCAAATGGCT--TGGTATATTGTCAATGTTTTGAATTGATCCATT 355099 Query 47246 gttttctataattttgttttttaa---ttcatttgaccaaagttttcgttcagttaatgt 47302 | ||| | ||||| ||||| || |||||| ||| | | | | | ||| Sbjct 355098 TTGTTCCAGAATTTCATTTTTCAAATCTTCATT---CCATAAACCTAGCTTTGATAAATC 355042 Query 47303 ttttaaAAGATGAGGATTAACAATTTGAAATTCTCCAGATAGTACTCTACGGCTATATAT 47362 | | | || ||||||| || || |||||||| || || | | | ||| || Sbjct 355041 ATCCACCAAATACTTGTTAACAACCTGGAACTCTCCAGAAAGAACACGTCTGGAATAAAT 354982 Query 47363 ATTACTTGT-ATATGGTTCTATAGATTCATTATTTCCAAAAATTTGAGCAGTTGATGCTG 47421 || || ||| || || | | |||||||| || || ||||| | || || || | Sbjct 354981 GTTGGAAGTGATA-GGCTCAAAACATTCATTAAAGCCCAAGATTTGGGAGGTCGAGGCCG 354923 Query 47422 TAGGCATGGATGCAACTAATAAGCTATTTCTTACTCCATATTTTTGTATCTNNNNNNNNN 47481 ||||||| ||||||| | ||| ||||| |||||| ||| || Sbjct 354922 TAGGCATCAATGCAACAAGTAATGAGTTTCTGACTCCAAATTGAGAAATTCGTTGTTTCA 354863 Query 47482 NNNGTTTCCAATCCCAAAGATCTGATGGAACAACATTCCAAAAATCATATTGAAGAATTC 47541 || ||||||||| | ||| | || ||||||||| | ||| | || | || | Sbjct 354862 AACTTTCCCAATCCCATAAATCGGTAGGTTTAACATTCCACATATCGAACTGTAATATGC 354803 Query 47542 CTTTACTTATCGGAGAACCATTATATGTTTTATAAGGACCGTATAGTTTAGCGAGTTCAC 47601 |||| || || ||||| | ||||| | ||| || | | || ||| | |||| Sbjct 354802 CTTTGGAAATTGGGGAACCCTCGTATGTCTCATAGCATCCTTCAACTTCAGCCAATTCAA 354743 Query 47602 AACTTGCTTCCAATGCACTATAATATATTGTTTCAAATATTTTTATGTTTAGATTCCTTG 47661 |||||||||||| || |||||| ||||||||||| ||||| || | | || | Sbjct 354742 CCGAAGCTTCCAATGCAGCATGATATATGGTTTCAAATATCTTTATATTCAACTCTCTCG 354683 Query 47662 CTTCTG-ATGATTCAAAAGGATANNNNNNNNNNNNNAATGTATCTGCCAATCCTTGAACA 47720 || | || | |||| | ||| |||||||| ||||| ||||||||| Sbjct 354682 ATTGAGCATCA-CCAAATGAATATCCCATTTTGAAAAATGTATCAGCCAAACCTTGAACA 354624 Query 47721 CCAATACCAATTGGTCTATGAGTTTTATTAGA-AAACTCAGCTTCTGGTAATGGATATTT 47779 |||| | | | ||||||||| |||| || || ||| ||||| ||| |||||| Sbjct 354623 CCAACAGCCACTGGTCTATGCCTTTTGTTTGAGCGACT-TGCTTCAGGTGTTGGATAAGC 354565 Query 47780 GTTTATATCTATAATTTTATTTAGANNNNNNNNNNNNNNNNNNACAATTTCTCTTAATTT 47839 || ||| || || || || | ||||| | || || Sbjct 354564 ACCTACATCGATGATCTTGTTCA---------AGTTCTTAACCACAATCTTGGCTACCTT 354514 Query 47840 AT-TAA--AATCAAACT----TGTT--------ATTTATAACAAACCTATTAAGTGCTAT 47884 || ||| ||| ||| | |||| | | |||||| | || | | Sbjct 354513 ATGTAAAGAATTAAAGTCATATGTTCCAGAGCCAGAGTTCACAAACATTGATAGAGAAAC 354454 Query 47885 AGATGCTAGATTACATACAGCTACCTCATTTGGATTAGTATATTGTATTATTTCAGCACA 47944 || ||||| || || ||||| || || || | ||| | | |||||| ||| Sbjct 354453 TGAAGCTAGGTTGCAGACAGCGGTTTCCTTGTCATCCGAATACTCCACAATTTCACAACA 354394 Query 47945 TAGATTACCACATTTGATAGTACCCAAATTTTGATGATT--ATTNNNNTTGTTACATGCG 48002 | ||| ||||||| || || | ||| | ||||| ||| | |||||||| Sbjct 354393 CAAGTTAGATGATTTGATGGTTCCAAGATTCTTTTGATTTGATT--TCTCATTACATGCA 354336 Query 48003 TCCTTGTAAAGCATAAAAGGTGTTCCAGTTTCTATCTGAGATTCAATGATAGATTTCCAA 48062 || |||||||| | ||| || | || |||||| | |||| | | |||| | ||| Sbjct 354335 TCTTTGTAAAGTAAAAATGGATTCCCTGTTTCTGTTTGAGCGACTAAAATAGCATGCCAT 354276 Query 48063 A----CAGT--CCTAGCCTTTATAACAGCTCTAGCTTTATTATCATGTTCGTATTTAGTA 48116 | | || || | ||| ||| | | ||| | |||| || || || Sbjct 354275 AGTTTCTGTGCACTGACTTTTCGGACATATTTTCCTTCAGCCTCATATTTGT------TA 354222 Query 48117 TATAACTTCTCAAATTCATCCCCATACACATTATCTAACCCAGGACATTCATTAGGACAC 48176 || ||||| |||| || | |||||| || ||| |||||||| | || | Sbjct 354221 TACAACTTAACAAACTCGGCACCATACGTATCTGTTAAGCCAGGACAACTGTCTTGAGAA 354162 Query 48177 ATCAATGACCAATCCTCATCATTTTTTACTCTAGTCATAAATATATCTGGTATCCAAAGA 48236 | ||| ||||||| || | |||| ||| | ||| || | |||| ||||||||| Sbjct 354161 AACAAACACCAATCTTCGGCCTTTTGAACTTTTTCCATGAAAAGGTCTGATATCCAAAGG 354102 Query 48237 GCTATAAATAAATCCCTAGTTCTTAGTTCTTCATTGCCACTATTCCTTTTAAGTTCAAGA 48296 || ||| ||||| || | | | | |||||| || ||| ||| || | | ||| | | Sbjct 354101 GCATAAAACAAATCTCTTGCTTTCACTTCTTCCTTTCCATGGTTCTTTCTCAATTCCAAA 354042 Query 48297 AAGTCCATTATATCAGCATGCCATGGTTCTAAATATATTGCCATTACACCTGGTCGTTTA 48356 || || | ||||| |||||||| ||||| | |||||| | | | ||||||| |||| Sbjct 354041 AATTCAAAAATATCTGCATGCCAAGGTTCAAGATATATGCAAAATGCTCCTGGTCTTTTA 353982 Query 48357 TTACCTCCTTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACAATA 48416 ||||| |||||||| | ||| |||||||| ||| | || | ||||| || || | Sbjct 353981 TTACCACCTTGATCAACATACTTGGCAGTAGCATTAAACACCCGCAACATCGGCACCAAT 353922 Query 48417 CCATTTGATATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTATATTACTAA-T 48475 ||| |||| || ||||| ||||| || || || || || || | ||||| || Sbjct 353921 CCACTTGACATTCCATTTGTTCCAGATATGTAGCTACCCGAGGCACGAATATTTGAAACA 353862 Query 48476 TGAAATACCTATACCACCTGCCATTTTAGATATTAGAGCACACCGTTTAAGGGTATCATA 48535 || ||| || | |||||| || ||| || || || || | | || || | | Sbjct 353861 TGTAAT-CCAACACCACCAGCACATTTCGAAATAAGTGCTGTTTGATGAACAGTTTTGAA 353803 Query 48536 AATTCCTTCTATACTATCATCTATCATATTTAATAGAAAACAACTAGACATTTGCGGATG 48595 ||| || || || || || ||||| | | ||| ||| || | ||||| Sbjct 353802 AATGCCATCGATGGAGTCGTCCTTCATAGCAACCAAAAAGCAAGAGGA----TAAGGATG 353747 Query 48596 ACA----AGTTCCTGAATTAAATAATGTTGGAGATGCATGAATAAACCATTTCTCTGATA 48651 | || || || | ||||| |||||||||||||| || || |||||| ||| | Sbjct 353746 GAATCTCTGTACCGGAGTAGAATAAAGTTGGAGATGCATGGATGAAATATTTCTTTGACA 353687 Query 48652 ACAATTTATATGTTTCAATAACAGAATCTATATCCCATTGATGTATACCTATAGATACAC 48711 || | ||| ||||| | | ||| ||| ||||| | ||| || || | || || | Sbjct 353686 TTAACTCATAGGTTTCCAAAGCAGCATCAATATCATCATCATGAATTCCAAGGGACACTC 353627 Query 48712 GCATTAACATATATTGAGGTCTTTCAACAATTTTGTTATTTATTTTCAAAAGATATGATT 48771 ||| || | |||||| || | |||| | | ||| | || ||||| || |||| Sbjct 353626 TCATGAAAAGATATTGCGGAGTCTCAAGCAACTGACCATTGAACTTTAAAAGGTAAGATT 353567 Query 48772 TTTCCAATGTTTTAAAACCAAAATAGTTGTATGAAAAGTCGTTATCATTAATAATTGATG 48831 | |||||| || || |||||||| | | || | || | |||||| ||| | | Sbjct 353566 TCATCAATGTCTTCAATCCAAAATAATCCAACAAATAATCTCTTTCATTATCAATAGCAG 353507 Query 48832 AATTTATTCTTTCCTTATGT 48851 ||| |||||||| ||||| Sbjct 353506 AATCGATTCTTTCAGTATGT 353487 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562107970889520