Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ambrosiozyma_20monospora_20[genbank_20GCA_5F001599995.1_202016-03- 01] 118 sequences; 24,978,438 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq23 196 2e-45 seq17 158 6e-34 >seq23 Length=373761 Score = 196 bits (216), Expect = 2e-45 Identities = 326/471 (69%), Gaps = 0/471 (0%) Strand=Plus/Minus Query 25896 AGAATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGAATCCACA 25955 |||| ||| ||| |||| ||| |||||| ||| ||| || |||||||||||||||| Sbjct 128687 AGAACAAAGTCCATTCAGAATTAGATTCAACTCTCTTCATGAACAAATCTGGAATCCACA 128628 Query 25956 TTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTAGATCTA 26015 || || |||||||| ||||| ||||||||||| |||||||||||| | | ||| | Sbjct 128627 AAGCTGGGAACAAATCTCTGGCTCTGATTTCTTCTTTACCGTGATTCTTTCTGATATCAA 128568 Query 26016 AGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACCTTTTCTTT 26075 || ||||| || || | |||||||||||| | ||| | |||||| ||| ||| | Sbjct 128567 TAAAGTCAAAGATGTCAGCGTGCCATGGTTCAATATAAAGGGCAAAAGCACCAGGTCTCT 128508 Query 26076 TTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACATTGGAACTA 26135 | ||||||||||| || ||||| ||||| | ||||||||| | | ||| |||| | Sbjct 128507 TGTTACCACCTTGATCAACATATCTAGCAGTATTGTTGAAAACTCTAACCATAGGAATGA 128448 Query 26136 ATCCAGTTGAAAATCCGTTTGTGCTATGAATCTTGGATCCTGTCGATCTAATATCGTGAG 26195 ||| ||||| ||||| || | || | || || || | |||||| | |||| Sbjct 128447 TACCATTTGAAGTACCGTTGGTACCGGCGATGTAAGAACCAGTGGCTCTAATGTTGTGAA 128388 Query 26196 CATGAATACCGATTCCACCAGCCCATTTTGAAATAGCTGCACAATCTGAAACTGTATCGA 26255 || | ||| || ||||| || || ||||| ||||| || | |||||| Sbjct 128387 TGTGTAGACCAATACCACCTGCAGTCTTAGAAATCAGAGCACACTCCTTCAATGTATCAT 128328 Query 26256 AAATTCCTTTTATGCTATCACCTTTCATTCCTAATAAAAAACAAGAAGATAATTGCGAAT 26315 |||| |||| || ||| | ||||| | | || |||||||| || | ||| | Sbjct 128327 AAATACCTTCAATAGAATCTTCCTTCATGGCAACCAAGAAACAAGAGGACATTTGTGGGC 128268 Query 26316 GAGTTGTTCCTGAATTAAATAATGTCGGTGTAGCATGAGTATAATATCCTT 26366 ||| || || | ||||| || || || | |||||| || |||||| || Sbjct 128267 GAGGAGTACCAGCGTTAAACAAAGTTGGAGAAGCATGGGTGAAATATCTTT 128217 Score = 116 bits (128), Expect = 2e-21 Identities = 386/590 (65%), Gaps = 24/590 (4%) Strand=Plus/Minus Query 24653 TCTTTTTCTAATGTAAATTGCTTAGCTGATACTGCTGGTTTAGTTCTAAGATAATACATT 24712 ||||| || | ||||||||| | || | | || | || |||||| ||||||||||| Sbjct 129906 TCTTTATCAACTGTAAATTGAATGGCAGCAGCGGCAGCTTGAGTTCTTAGATAATACATA 129847 Query 24713 CCAGTTTTCAATTTCTTCTTCCAACCGTAAAAATGCATTGATGTTAGTTTTGCAATGTTT 24772 ||||| ||||| ||||||||||||||| |||||||| || || | || | ||| || Sbjct 129846 CCAGTCTTCAAACCCTTCTTCCAACCGTAGAAATGCATGGAAGTCAACTTACCCATGGTT 129787 Query 24773 GCTGATTCTAAAAACAA--GTTCATCGATTGAGCTTGGCAAACAAAACGTTGTCTATCTG 24830 | | |||| || | ||||| ||||| | ||| || || ||| || | Sbjct 129786 G--GGTTCTTCAAGTGAATGTTCAAAGATTGGGATTGATCGACGTAAGCACCTCTGTCAG 129729 Query 24831 CAGCTAAGTCAATGATCG--TTTTCATCGATATATCGTAAGCTGTTTTGTATCTCTCTTT 24888 ||| | ||||| || | |||| | || || || | | || ||||| ||| ||| Sbjct 129728 CAGACATATCAATAATAGCCTTTTGA--GAAATTTCCCACACAGTCTTGTAAATCTTTTT 129671 Query 24889 TATCTCAGTTGGAATACTTGCAATATTTTGAACTGATCCATTTTCTCTCAATAGATTCAA 24948 | ||| |||| | | | | ||||||| || || || || |||| || | Sbjct 129670 CAATTCATCAGGAACATTAGGCAAGTTTTGAATGGAACCGTTATCAGA-AATA-ATGAAG 129613 Query 24949 TC--TCATATTCGGTGTCCAAAGATTAATTTTTTCAAGATCTCTAATCAAGTGTTTATTT 25006 | |||| || ||||||| | || | | ||| | | ||||| | || Sbjct 129612 TTCTTCATGTTATCATCCCAAAGACCCAAGTTAACCAAATCCTTCAACAAGTATGGGTTG 129553 Query 25007 ATGATAATAAATTCTCCAGACAAAACTCTTCTTATTGATAAGTTTGAAGTGAATGGTTCA 25066 | || ||||| |||| ||| |||||||| | | ||| || ||| |||| || Sbjct 129552 ACAATTTGGAATTCACCAGCCAAGACTCTTCTAGAGTAAATGTTGGAGGTGTATGGCTCG 129493 Query 25067 AAACATTCATTATTTCCTAAGATTTGAGAAGTAGATGCTGTTGGCATTAATGCTATTAAT 25126 ||||||||||| | || |||||||||||||| || || ||||||||| |||| || Sbjct 129492 AAACATTCATTGTAACCCAAGATTTGAGAAGTGGAAGCAGTTGGCATTGGAGCTAACAAC 129433 Query 25127 AGCGAATTTCTCAAACCATATTTAACAATCTCTTGTTTTAATTTATCCCAATC---TAAA 25183 | || ||||| ||||| | || ||||| |||| || || |||||| || |||| Sbjct 129432 AATGAGTTTCTTAAACCGTGCTTGACAATGTCTTCCTTCAAAGAATCCCACTCCCATAAA 129373 Query 25184 TTATTATCTAACTCGATATCGTTATCATATAAATCAAATTGTAACAATCC 25233 | | | | || || ||| | ||||||||||||| || ||||| Sbjct 129372 TCAGT---TGGCT-----TC-TTACCCCATAAATCAAATTGCAATAATCC 129332 >seq17 Length=626534 Score = 158 bits (174), Expect = 6e-34 Identities = 280/402 (70%), Gaps = 11/402 (3%) Strand=Plus/Minus Query 25910 TCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGAATCCACATTGCATAAAATAAA 25969 || || ||||| |||||| ||||| || | |||| ||||| | |||||||| ||| Sbjct 354146 TCGGCCTTTTG---AACTTTTTCCATGAAAAGGTCTGATATCCAAAGGGCATAAAACAAA 354090 Query 25970 TCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATA 26029 ||||| ||| ||| |||||| ||||| || |||||| | | || || || ||||||||| Sbjct 354089 TCTCTTGCTTTCACTTCTTCCTTTCCATGGTTCTTTCTCAATTCCAAAAATTCAAAAATA 354030 Query 26030 TCTGAGTGCCATGGTTCTAAATAGATAGCAAAA--CTACCTTTTCTTTTTCCTCCACCTT 26087 |||| ||||| ||||| | ||| || |||||| || ||| |||||| ||||||| Sbjct 354029 TCTGCATGCCAAGGTTCAAGATATAT-GCAAAATGCT-CCTGGTCTTTTATTACCACCTT 353972 Query 26088 GATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACATTGGAACTAATCCAGTTGAAA 26147 |||| || || | ||||| |||| || || |||||| || || |||||| |||| | Sbjct 353971 GATCAACATACTTGGCAGTAGCATTAAACACCCGCAACATCGGCACCAATCCACTTGACA 353912 Query 26148 ATCCGTTTGTGCTATGAATCTTGGATCCTGTCGATCTAATATCGTGAGCATGAATACCGA 26207 ||| ||||| | | || | | || | | | ||||| | |||| | || | Sbjct 353911 TTCCATTTGTTCCAGATATGTAGCTACCCGAGGCACGAATATTTGAAACATGTAATCCAA 353852 Query 26208 TTCCACCAGCCCATTTTGAAATAGCTGCACAATCTGA--AACTGTATCGAAAATTCCTTT 26265 |||||||| ||||| |||||| || | | ||| ||| || | |||||| || | Sbjct 353851 CACCACCAGCACATTTCGAAATAAGTG--CTGTTTGATGAACAGTTTTGAAAATGCCATC 353794 Query 26266 TATGCTATCACCTTTCATTCCTAATAAAAAACAAGAAGATAA 26307 ||| || | ||||| | | ||||| ||||| ||||| Sbjct 353793 GATGGAGTCGTCCTTCATAGCAACCAAAAAGCAAGAGGATAA 353752 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253039636096850