Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ambrosiozyma_20monospora_20[genbank_20GCA_5F001599995.1_202016-03- 01] 118 sequences; 24,978,438 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq58 116 4e-21 >seq58 Length=80238 Score = 116 bits (128), Expect = 4e-21 Identities = 269/397 (68%), Gaps = 10/397 (3%) Strand=Plus/Minus Query 138173 ATGTTTTGCTACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAA 138232 ||||| || |||| ||| ||||| || || ||||||||||| || || || || || Sbjct 16064 ATGTTCAGCAACACAAATTGGACCCACACCTGGACCTCCACCACCGTGAGGTATGGCAAA 16005 Query 138233 TGTCTTATGTAAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACC 138292 |||||||||||| |||| ||||| ||||| ||||| | |||| ||| | || || Sbjct 16004 TGTCTTATGTAAGTTTAAGTGACAAACATCAGCACCCAAATCACCTGGAGAAGTTAATCC 15945 Query 138293 TACCTGTGCATTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGAT 138352 || || ||||| | || |||||||| | || || ||||| ||| |||||| | Sbjct 15944 CACTTGGGCATTCATGTTGGCACCATCCATGTAAACTTGACCTCCAGCAGTATGAACCA- 15886 Query 138353 CTTACATATCTG-TCTGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAATCA 138411 || | | | | ||| || ||| || || | ||||| || |||||||| ||||||| Sbjct 15885 ATTCAACAGCAGTTCTAATTGTTGGCTCGAACAGACCATATGTAGATGGATAAGTAATCA 15826 Query 138412 TAAT-ACATGAGAGTT---CAAATGTATTCATGATTGCTTTCTTCTCTAGATCTTTGATG 138467 |||| || |||| | |||| || | | |||| | || ||||| | Sbjct 15825 TAATGGCAGCTAAGTTTTCCGCATGTTTT--TCA-ACCTTTACTTTC-AGATCGGCCAAA 15770 Query 138468 TCTATGTTGCCATCATCATCACACTTGACACCTACAACTTTCATTCCTGCCATGACTGCA 138527 || | ||| |||| | ||| || ||| |||||||||| || ||||| | ||| Sbjct 15769 TCCAAGTTACCATTACTTAAACATTTCACAGGAACAACTTTCAAACCGGCCATAGCAGCA 15710 Query 138528 CTAGCAGGATTAGTTCCATGTGCTGACTCTGGTATCA 138564 || |||||||| ||||| |||||| | || |||| Sbjct 15709 GAGGCTGGATTAGTACCATGGGCTGACACAGGAATCA 15673 Score = 113 bits (124), Expect = 5e-20 Identities = 158/222 (71%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 139859 CATTGCCTCTGCTGCTGCAGTTGCTTCATCTAATAGAGATGCGTTTGCTATTGGTAATCC 139918 ||| || || || || || || |||||||||| | ||| | ||| || | ||| || || Sbjct 14336 CATGGCTTCAGCAGCAGCTGTACCTTCATCTAACAAAGAAGAGTTAGCAACTGGCAAGCC 14277 Query 139919 TGTAAGTTCTGTGATGAGCGTTTGGTAATTGAATAAAGCTTCCAATCTTCCCTGAGATAT 139978 || | || | || | ||||||||||| |||||| || ||||| || ||||| | Sbjct 14276 AGTTAAGTCAGAGACAACGGTTTGGTAATTCAATAAACTCTCTAATCTACCTTGAGAAAC 14217 Query 139979 CTCAGCTTGATAGGGAGTGTAAGATGTGTACCAACTAGGATTCTCAAGAACGTTTCGCTG 140038 |||| |||||| ||||||||||| || |||||| || || || | | ||||| || Sbjct 14216 TTCAGGTTGATAAGGAGTGTAAGAAGTATACCAAGCTGGGTTTTCTAACAAGTTTCTTTG 14157 Query 140039 TATGACTGGGGGTGTAATGGTTCCATAGTATCCTTGACCTAT 140080 ||||| ||| || ||||||||||| |||| ||| || Sbjct 14156 AATGACACCAGGTAGGATTGTTCCATAGTAACCTTTACCAAT 14115 Score = 96.9 bits (106), Expect = 4e-15 Identities = 191/280 (68%), Gaps = 2/280 (1%) Strand=Plus/Minus Query 139263 CCATCTGCACCATGATATGCTGCATAGAATCCAGACATATTTGCGAGCAGTGCTTGTGCT 139322 ||||| ||||||| || | ||||| | || || || || | || ||||| || Sbjct 14956 CCATCAACACCATGGTAGACAGCATAATTTGCAACAATGTTAGCCAACAAAGCTTGAGCG 14897 Query 139323 GTGCAGATGTTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTAGTTTGTAGTGCT 139382 || || ||||| || || || ||||| |||| || || ||||| ||||| | || Sbjct 14896 GTACAAATGTTGGAAGTAGCCTTTTCTCTCTTAATGTGTTGTTCTCTTGTTTGCAAAGCC 14837 Query 139383 AATCTGTATGCAGGATTGCCTTCGCTGTCCACTGACTGACCTACAATTCTGCCAGGTATC 139442 ||||| | || |||| || || || || ||| || | ||| || || || Sbjct 14836 AATCTTAAAGCTTGATTACCCAATCTATCTTTGGAGACACCAACCAATCTACCTGGCATT 14777 Query 139443 TTTCTCTTATACTTGTCTGTTGTTGCAAAGAATGCAGCATGAGGACCTCCGTATCCCATA 139502 ||||| | | || | || ||||||||||||||||||||||| ||| ||||||| Sbjct 14776 TTTCTTTGCAATTTTTGGGTGACAGCAAAGAATGCAGCATGAGGACCACCGAATCCCATT 14717 Query 139503 GGAATACCAAACCTTTGCATACTA-CCTACAGCAATATCA 139541 || | |||||| ||||| | || | |||| | |||||||| Sbjct 14716 GGGACACCAAATCTTTG-AGACGATCCTAAAACAATATCA 14678 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578997545977360