Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ambrosiozyma_20monospora_20[genbank_20GCA_5F001599995.1_202016-03- 01] 118 sequences; 24,978,438 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq3 159 6e-34 seq40 147 4e-30 seq17 134 2e-26 >seq3 Length=1000385 Score = 159 bits (176), Expect = 6e-34 Identities = 174/231 (75%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 |||||||||||||||| | |||| ||||| || | || || ||| || |||||| Sbjct 936291 ATACCACCTCTCAATCTCAAAACCAAGTGCAAAGTGGATTCCTTTTGAATGTTGTAGTCG 936350 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 || || |||||| || || ||||| || |||||||| || ||||| ||||||||||| Sbjct 936351 GACAAGGTTCTACCGTCTTCCAATTGCTTACCGGCAAAGATCAATCTTTGTTGATCAGGT 936410 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || ||||| |||||||| || |||| || | ||| ||| || |||||||| ||| Sbjct 936411 GGGATACCTTCCTTATCTTGGATCTTGGACTTGACATTGTCAATGGTGTCGGAAGATTCA 936470 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATT 193361 ||||| | || || || ||||| || | || || ||||| ||||||||| Sbjct 936471 ACTTCCAAGGTAATTGTCTTACCAGTCAAGGTCTTAACAAAAATTTGCATT 936521 >seq40 Length=167105 Score = 147 bits (162), Expect = 4e-30 Identities = 170/229 (74%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 193132 TACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGG 193191 ||||||||||||||| | |||| || | || | || || || || ||||| | Sbjct 19992 TACCACCTCTCAATCTTAAAACCAAGTGAAGAGTTGATTCCTTTTGGATGTTGTAGTCAG 19933 Query 193192 ATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAG 193251 | || |||||| ||| |||||||| || || || ||||||||||||||||||||||| | Sbjct 19932 ACAARGTTCTACCATCTTCTAATTGCTTACCAGCGAAAATTAATCTCTGTTGATCAGGTG 19873 Query 193252 GTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAA 193311 | || || || |||||||| || || | ||| | || ||| || || || || |||| Sbjct 19872 GAATACCCTCCTTATCTTGGATCTTTGATTTAACGTTATCAATGGTGTCAGATGATTCAA 19813 Query 193312 CTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 |||| | ||| ||||| ||||| || | ||||| ||||| |||||||| Sbjct 19812 CTTCCAAAGTGATAGTCTTACCAGTCAATGTTTTAACAAAGATTTGCAT 19764 Score = 107 bits (118), Expect = 3e-18 Identities = 143/200 (72%), Gaps = 2/200 (1%) Strand=Plus/Minus Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184 |||| |||||||||||||||| | |||| || | || | || || || || Sbjct 19771 ATTTGCATACCACCTCTCAATCTCAACACCAAGTGAAGWGTTGATTCCTTTTGRATGTTG 19712 Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244 ||||| || || |||||| ||| |||||||| || || || ||||| ||||| ||||| Sbjct 19711 TAGTCAGACAARGTTCTACCATCTTCTAATTGCTTACCAGCGAAAATCAATCTTTGTTGG 19652 Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304 ||||| || || ||||| |||||||| || |||| || | ||| ||| || || || Sbjct 19651 TCAGGTGGAATACCTTCCTTATCTTGWATCTTGGACTTAACATTGTCAATGGTGTCAGAT 19592 Query 193305 GACTCAACTTCTAGAGTTAT 193324 || || || ||| | |||| Sbjct 19591 GATTCGAC--CTATAATTAT 19574 >seq17 Length=626534 Score = 134 bits (148), Expect = 2e-26 Identities = 169/232 (73%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 193133 ACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGA 193192 |||||||||||||| | |||| || | || | || || ||| || ||||| || Sbjct 620749 ACCACCTCTCAATCTCAAAACCAAGTGAAGAGTGGATTCCTTTTGAATGTTGTAGTCAGA 620808 Query 193193 TAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGG 193252 || |||||| ||| || ||||| || || |||||||| ||||| ||||| ||||| || Sbjct 620809 CAAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAAATCAATCTTTGTTGGTCAGGTGG 620868 Query 193253 TATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAAC 193312 || ||||| || ||||| || |||| || | ||| ||| || || || || || || Sbjct 620869 GATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAGGATTCGAC 620928 Query 193313 TTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATTTTA 193364 || | ||| || || |||||||| || || || ||||| |||||||| ||| Sbjct 620929 CTCCAAAGTGATGGTCTTACCTGTAAGGGTCTTAACAAAAATTTGCATCTTA 620980 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899653073009760