Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ambrosiozyma_20monospora_20[genbank_20GCA_5F001599995.1_202016-03-
01] 118 sequences; 24,978,438 total letters
Query= NC_021247.1
Length=228750
Score E
Sequences producing significant alignments: (Bits) Value
seq12 232 1e-55
seq40 141 1e-28
seq3 123 4e-23
seq17 122 1e-22
>seq12
Length=722896
Score = 232 bits (256), Expect = 1e-55
Identities = 568/845 (67%), Gaps = 38/845 (4%)
Strand=Plus/Minus
Query 17879 ACTTTTTTCTCGAAGAAATTTGTCTTTCCTTCCAATGATATTAAATTCATAAAATCAAAT 17938
||| | ||||||||||| || ||||| || |||| || || | ||| || || |||
Sbjct 314429 ACTCTCTTCTCGAAGAAGTTAGTCTTACCAGCCAAGGAAATATTTTCCATGAAGTCGAAT 314370
Query 17939 GGATTAGTG--GTTTTATAATATTTTTCTTGTATT--AATTCGTATAATAATCTATCTGC 17994
|| || ||| ||| || | | |||||| || || | || ||||| || ||
Sbjct 314369 GGGTTTGTGACGTTGTAGA----TCTTCTTGCATCCCAAAGCAACCAACAATCTGTCAGC 314314
Query 17995 TACAAATTCGACATATTGTGACATCAAATCGCAATTCATACCTAGTAGTCTGAAAGGTAG 18054
|||||||| || ||||| ||||||| || || |||||||| | | ||| || |
Sbjct 314313 AACAAATTCAACGTATTGACACATCAAGTCACAGTTCATACCCAACAACTTGACTGGCAA 314254
Query 18055 AGCATCAATAATAAAT-TCTTTCTCTATCTCAACAGACTCTTTTATTATGTTTATTACCC 18113
||||||| | | || ||||| || || ||||| | || | || || || ||
Sbjct 314253 AGCATCAGTGAAGTATCTCTTT-TCAATGTCAACGGCTTCAGTGATAATCTTGGCAACA- 314196
Query 18114 TAGATTTTGGCAATT----TATTAATTATGTGATTATAATATAATAAACACGCAAAATCA 18169
|||| || | | || | | |||| | |||| ||||| || ||||||
Sbjct 314195 ---ATTTCTTCATCTGGGGTGTTGTTCAAGTGAG---AGAATAACAAACAAGCGAAATCA 314142
Query 18170 GTGTGTAAACCTTCATCTCTGGATATTAATTCGTTACTAAACGTTAACCCGGGCATTATA 18229
|| || | |||||||||||| | || ||||||||| || || || || ||||| | |
Sbjct 314141 GTATGCAGACCTTCATCTCTACAGATCAATTCGTTAGAGAAAGTCAAACCTGGCATCAAA 314082
Query 18230 CCTCttttttttAGCCAAAATATCGATGCGAAACTACTAGAAAAGAATATACCCTCAAC- 18288
||||| || || | ||| || || | || ||| || ||| ||||| |||||||||||
Sbjct 314081 CCTCTCTTCTTCAACCAGAAGATGGCAGCAAAAGAACCAGAGAAGAAAATACCCTCAACA 314022
Query 18289 GCACGCGAACGCTATTAATCTTTCAGCAAA-ACTGTATTTATTGCTCAG-TATCCATTTT 18346
||| || || || | ||||||||| |||| | | ||| || |||| |||||| |
Sbjct 314021 GCA-GCAAAGGCAACCAATCTTTCACCAAACAAAGCATT--TTCATCAGAAATCCATCTC 313965
Query 18347 TGTGCCCATTCTCCTTNNNNNNNNATACACGGTATACTCTCTATAGCATT---AAACAAA 18403
||||| || ||| ||||| || | | || |||||||| || |||
Sbjct 313964 AAAGCCCAGTCCGCTTTTTCTCTGATACATGGAACGTTATCAATAGCATTGAATAAGAAA 313905
Query 18404 TCATCTTTTTCTTTGGAATCTTTTATATAAGTGTCGATTAACAAAGAATACATTTCAGAA 18463
||| | || |||||| ||| || | ||||||||| || || | ||| || |||||||
Sbjct 313904 TCAGC--TTCCTTTGG-ATCCTTGACATAAGTGTCAATCAATAGAGAGTAAGTTTCAGAG 313848
Query 18464 TGTATGCTTTCCATAGCTATCTGAAAACTATAAAACGATCTAGCCTCGGGATATTGAATC 18523
|| ||| ||||||| || || |||| || || | |||| || ||| |||||
Sbjct 313847 TGGATGTTTTCCATCATGATTTGGAAACCGTAGAAACACTTAGCTTCAGGAACTTGAACT 313788
Query 18524 TCGCTATAAAATCTTTCTACCAAATTCTCATTAACTATACCGTCAGCAGATGCGAAAAAT 18583
|| | | || |||| ||||| || ||||| || ||||| || | || || || ||
Sbjct 313787 TCAGCAGAGAAGTTTTCAACCAAGTTTTCATTGACAATACCATCGGAAGCAGCAAAGAAA 313728
Query 18584 GCCAAAACATATTTA-ATGAAATGTTTTTCATTATCCTTGA---GATTGTTCCATTCATC 18639
|||||||| | | | ||||||| | |||||||| | || | |||||||| |||||
Sbjct 313727 GCCAAAAC-TCTAGACATGAAATATCTTTCATTAGCATTCAACTTGTTGTTCCAGTCATC 313669
Query 18640 TATATCTTTTGATAGATCAACTTCTTCCGATGTCCAAAAAGATGATTCGGCCTGTTTGTA 18699
| ||| || || | ||||| ||||| | ||||| ||||| | ||| || |||||
Sbjct 313668 CAAATCCTTAGACAAATCAATCTCTTCAGCAGTCCAGAAAGAAGCTTCTTGCTTCTTGTA 313609
Query 18700 CATTT 18704
|||||
Sbjct 313608 CATTT 313604
>seq40
Length=167105
Score = 141 bits (156), Expect = 1e-28
Identities = 170/230 (74%), Gaps = 4/230 (2%)
Strand=Plus/Plus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
|||||||| ||| |||||||||||||||| || ||||| || || ||||| ||| |||
Sbjct 19764 ATGCAAATCTTTGTTAAAACATTGACTGGTAAGACTATCACTTTGGAAGTTGAATCATCT 19823
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|| | ||| ||||| ||| || || |||||||| || || || || || || |||
Sbjct 19824 GACACCATTGATAACGTTAAATCAAAGATCCAAGATAAGGAGGGTATTCCACCTGATCAA 19883
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
|| ||||| |||| || |||||||| | |||||| ||||| || || || || |
Sbjct 19884 CAGAGATTAATTTTCGCTGGTAAGCAATTAGAAGATGGTAGAACYTTGTCTGACTACA-- 19941
Query 156003 ATATCCAAA--GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050
| ||||||| || | || ||||| || || |||||||| ||||| |||
Sbjct 19942 ACATCCAAAAGGAATCAACTCTTCACTTGGTTTTAAGATTGAGAGGTGGT 19991
Score = 98.7 bits (108), Expect = 1e-15
Identities = 135/188 (72%), Gaps = 2/188 (1%)
Strand=Plus/Plus
Query 155864 ATTAGAAGTCGAAGATTCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGA 155923
|||| | |||||| ||||| | ||| || || || || || |||||||| ||
Sbjct 19577 ATTATAGGTCGAATCATCTGACACCATTGACAATGTTAAGTCCAAGATWCAAGATAAGGA 19636
Query 155924 AGGCATACCTCCAGAACAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAG 155983
||| || || || || |||||||||||||||| || |||||||| | |||||| ||
Sbjct 19637 AGGTATTCCACCTGACCAACAAAGATTGATTTTCGCTGGTAAGCAATTAGAAGATGGTAG 19696
Query 155984 AACTTTATCAGATTATAATATATCCAAA-GAGGCGACGCTTCATTTAGTGTTAAGATTAA 156042
||| || || || || || || | ||| || | || ||||| || ||||| ||||| |
Sbjct 19697 AACYTTGTCTGACTACAACAT-YCAAAAGGAATCAACWCTTCACTTGGTGTTGAGATTGA 19755
Query 156043 GAGGCGGT 156050
|||| |||
Sbjct 19756 GAGGTGGT 19763
>seq3
Length=1000385
Score = 123 bits (136), Expect = 4e-23
Identities = 167/230 (73%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881
||||||||| ||| |||| || |||||||| || || ||||| || ||||| ||| |||
Sbjct 936521 AATGCAAATTTTTGTTAAGACCTTGACTGGTAAGACAATTACCTTGGAAGTTGAATCTTC 936462
Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941
|| | ||| || || || || || |||||||| ||||| || || || || ||
Sbjct 936461 CGACACCATTGACAATGTCAAGTCCAAGATCCAAGATAAGGAAGGTATCCCACCTGATCA 936402
Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAA 156001
|||||||||||| | |||||||||||| | ||||| ||||| || || || || ||
Sbjct 936401 ACAAAGATTGATCTTTGCCGGTAAGCAATTGGAAGACGGTAGAACCTTGTCCGACTACAA 936342
Query 156002 TATATCCAAA-GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050
|| || ||| || | || | || || || || ||||| ||||| |||
Sbjct 936341 CAT-TCAAAAGGAATCCACTTTGCACTTGGTTTTGAGATTGAGAGGTGGT 936293
>seq17
Length=626534
Score = 122 bits (134), Expect = 1e-22
Identities = 169/234 (72%), Gaps = 2/234 (1%)
Strand=Plus/Minus
Query 155819 TAAAATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGA 155878
||| |||||||| ||| |||| || | || || || || || || || || ||||||
Sbjct 620980 TAAGATGCAAATTTTTGTTAAGACCCTTACAGGTAAGACCATCACTTTGGAGGTCGAATC 620921
Query 155879 TTCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGA 155938
||||| | ||| || || || || || ||||| || ||||| || || || ||
Sbjct 620920 CTCTGACACCATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATCCCACCTGA 620861
Query 155939 ACAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTA 155998
|||||||||||||||| ||| |||||||| | |||||| |||||||| || || ||
Sbjct 620860 CCAACAAAGATTGATTTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCTGACTA 620801
Query 155999 TAATATATCCAAA-GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGTG 156051
|| || || ||| || | || ||||| || || || ||||| ||||| ||||
Sbjct 620800 CAACAT-TCAAAAGGAATCCACTCTTCACTTGGTTTTGAGATTGAGAGGTGGTG 620748
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 731870920488800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |