Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ambrosiozyma_20monospora_20[genbank_20GCA_5F001599995.1_202016-03-
01] 118 sequences; 24,978,438 total letters
Query= NC_021248.1
Length=307691
Score E
Sequences producing significant alignments: (Bits) Value
seq12 176 9e-39
seq40 152 1e-31
seq3 141 2e-28
seq17 120 6e-22
>seq12
Length=722896
Score = 176 bits (194), Expect = 9e-39
Identities = 480/733 (65%), Gaps = 16/733 (2%)
Strand=Plus/Minus
Query 49647 AATAATCTATCGGCTACAAATTCAACATATTGTGACATTAATTCACAATTCATACCCAAT 49706
|| ||||| || || ||||||||||| ||||| |||| || ||||| |||||||||||
Sbjct 314327 AACAATCTGTCAGCAACAAATTCAACGTATTGACACATCAAGTCACAGTTCATACCCAAC 314268
Query 49707 AATTTAAATGGTAATGCATCA-TCAATAAATTCtttttctatttctacagcttgtttaat 49765
|| || | ||| || |||||| | || | |||||| | || || || |||| | ||
Sbjct 314267 AACTTGACTGGCAAAGCATCAGTGAAGTATCTCTTTT-CAATGTCAACGGCTTCAGTGAT 314209
Query 49766 tatcataattatattattttttgataatttatatt--taatatgattcgcatatattaaA 49823
||| | | | |||| || || | || | | ||| | ||| |||
Sbjct 314208 AATCTTGGCAACA--ATTTCTTCATCTGGGGTGTTGTTCAAGTGA---GAGAATAACAAA 314154
Query 49824 CATGCAAAATCAGTATGTAAACCCTCGTCCCTAGATATAAATTCATTACTAAAAGTTAAT 49883
|| || ||||||||||| | ||| || || ||| | || ||||| ||| ||||| ||
Sbjct 314153 CAAGCGAAATCAGTATGCAGACCTTCATCTCTACAGATCAATTCGTTAGAGAAAGTCAAA 314094
Query 49884 CCTGGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAAAAGAAT 49943
|||||||| || |||||||| || | ||| || || | |||||| || ||| |||||
Sbjct 314093 CCTGGCATCAAACCTCTCTTCTTCAACCAGAAGATGGCAGCAAAAGAACCAGAGAAGAAA 314034
Query 49944 ATACCCTCGACACACGCAAATGCTATTATTCTTGCTCCAAACATTAATTTATCATCTAAT 50003
|||||||| ||| ||||| || | | |||| | ||||||| || ||||| |
Sbjct 314033 ATACCCTCAACAGCAGCAAAGGCAACCAATCTTTCACCAAACAAAGCATTTTCATCAGAA 313974
Query 50004 ATCCAATTTATAGCCCAATCTGCtttttttttGATAGAAGGTATATTTTCTATAGCTTTA 50063
||||| | | |||||| || ||||||| | ||||| | || | || || ||||| ||
Sbjct 313973 ATCCATCTCAAAGCCCAGTCCGCTTTTTCTCTGATACATGGAACGTTATCAATAGCATTG 313914
Query 50064 AATAATTCAtttttttCATNNNNNNNNNNNNNNNNNNNNNNNATTAATAAAGAATACATT 50123
||||| || ||| | || |||| ||| || ||
Sbjct 313913 AATAAGAAATCAGCTTCCTTTGGATCCTTGACATAAGTGTCAATCAATAGAGAGTAAGTT 313854
Query 50124 TCAGAATGTACAGCTTCCATAGCTATTTGAAATGAATAAAATTGTCTTGCTTCTGAATAC 50183
||||| || | |||||| ||||| || || || | ||||| | |
Sbjct 313853 TCAGAGTGGATGTTTTCCATCATGATTTGGAAACCGTAGAAACACTTAGCTTCAGGAACT 313794
Query 50184 TGAACTTCGGAAAAGAATCGTTCAACTAAATTCTCAGATACAATACCATCAGATGCTGCG 50243
|||||||| | | |||| |||||| || || ||| ||||||||||| || || ||
Sbjct 313793 TGAACTTCAGCAGAGAAGTTTTCAACCAAGTTTTCATTGACAATACCATCGGAAGCAGCA 313734
Query 50244 AAGAATGCTAAAACGTATTTA-ATAAAATGTTTTTCATTATCTTTTAAATT----TTCCC 50298
||||| || ||||| | | | || |||| | |||||||| | || || || ||||
Sbjct 313733 AAGAAAGCCAAAAC-TCTAGACATGAAATATCTTTCATTAGCATTCAACTTGTTGTTCCA 313675
Query 50299 AAGATTCAAGATCGTTTGATAAATCTACTTCTTCTATTGTCCAAAATGATGCTACGGATT 50358
|| ||| ||| || || ||||| | ||||| ||||| || || ||| | |
Sbjct 313674 GTCATCCAA-ATCCTTAGACAAATCAATCTCTTCAGCAGTCCAGAAAGAAGCTTCTTGCT 313616
Query 50359 TTTTATACATTTG 50371
| || ||||||||
Sbjct 313615 TCTTGTACATTTG 313603
>seq40
Length=167105
Score = 152 bits (168), Expect = 1e-31
Identities = 171/229 (75%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 192308 TACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAG 192367
|||||||||| | | ||| || || || | ||| | || || ||| || || ||||
Sbjct 19992 TACCACCTCTCAATCTTAAAACCAAGTGAAGAGTTGATTCCTTTTGGATGTTGTAGTCAG 19933
Query 192368 ATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTG 192427
| || |||| |||| || ||||| |||||||| || ||||||||||||||||||||||
Sbjct 19932 ACAARGTTCTACCATCTTCTAATTGCTTACCAGCGAAAATTAATCTCTGTTGATCAGGTG 19873
Query 192428 GTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTA 192487
| || || || |||||||| || || ||| || ||| || | || || ||||| |
Sbjct 19872 GAATACCCTCCTTATCTTGGATCTTTGATTTAACGTTATCAATGGTGTCAGATGATTCAA 19813
Query 192488 CTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
|||| | ||| || || |||||||| |||||||||| ||| || |||||
Sbjct 19812 CTTCCAAAGTGATAGTCTTACCAGTCAATGTTTTAACAAAGATTTGCAT 19764
Score = 89.7 bits (98), Expect = 1e-12
Identities = 106/146 (73%), Gaps = 0/146 (0%)
Strand=Plus/Minus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
||||||||||| | | || || || || | || | || || || || || |||
Sbjct 19765 ATACCACCTCTCAATCTCAACACCAAGTGAAGWGTTGATTCCTTTTGRATGTTGTAGTCA 19706
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
|| || |||| |||| || ||||| |||||||| || || ||||| ||||| ||||||
Sbjct 19705 GACAARGTTCTACCATCTTCTAATTGCTTACCAGCGAAAATCAATCTTTGTTGGTCAGGT 19646
Query 192427 GGTATTCCTTCTTTATCTTGTATTTT 192452
|| || ||||| |||||||| || ||
Sbjct 19645 GGAATACCTTCCTTATCTTGWATCTT 19620
>seq3
Length=1000385
Score = 141 bits (156), Expect = 2e-28
Identities = 177/240 (74%), Gaps = 2/240 (1%)
Strand=Plus/Plus
Query 192299 GTTTAATAATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCT-CTTTAGAGATA 192357
||| ||| ||||||||||| | | || || || || ||||| | | |||| || ||
Sbjct 936283 GTTCAATGATACCACCTCTCAATCTCAAAACCAAGTGCAAAGTGGATTCCTTTTGA-ATG 936341
Query 192358 TTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGT 192417
|| || || || || |||| | || |||||||| ||||| |||||||| ||||| |||
Sbjct 936342 TTGTAGTCGGACAAGGTTCTACCGTCTTCCAATTGCTTACCGGCAAAGATCAATCTTTGT 936401
Query 192418 TGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCT 192477
||||||||||| || ||||| |||||||| || || || ||||| || | ||
Sbjct 936402 TGATCAGGTGGGATACCTTCCTTATCTTGGATCTTGGACTTGACATTGTCAATGGTGTCG 936461
Query 192478 GACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATT 192537
|| ||||| ||||| | ||||| || |||||||| || || |||| ||| || ||||||
Sbjct 936462 GAAGATTCAACTTCCAAGGTAATTGTCTTACCAGTCAAGGTCTTAACAAAAATTTGCATT 936521
>seq17
Length=626534
Score = 120 bits (132), Expect = 6e-22
Identities = 168/233 (72%), Gaps = 2/233 (1%)
Strand=Plus/Plus
Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTC-TTTAGAGATATTATAATCAG 192367
||||||||| | | || || || || | ||| | || ||| || || || || ||||
Sbjct 620749 ACCACCTCTCAATCTCAAAACCAAGTGAAGAGTGGATTCCTTTTGA-ATGTTGTAGTCAG 620807
Query 192368 ATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTG 192427
| || |||| |||| |||||||| ||||||||||| || ||||| ||||| |||||||
Sbjct 620808 ACAAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAAATCAATCTTTGTTGGTCAGGTG 620867
Query 192428 GTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTA 192487
| || ||||| || ||||| || || || ||||| || | || || ||||| |
Sbjct 620868 GGATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAGGATTCGA 620927
Query 192488 CTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTTA 192540
| || | ||| ||||| ||||| || | || |||| ||| || ||||| |||
Sbjct 620928 CCTCCAAAGTGATGGTCTTACCTGTAAGGGTCTTAACAAAAATTTGCATCTTA 620980
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 984478511589300
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |