Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ambrosiozyma_20monospora_20[genbank_20GCA_5F001599995.1_202016-03- 01] 118 sequences; 24,978,438 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq12 176 9e-39 seq40 152 1e-31 seq3 141 2e-28 seq17 120 6e-22 >seq12 Length=722896 Score = 176 bits (194), Expect = 9e-39 Identities = 480/733 (65%), Gaps = 16/733 (2%) Strand=Plus/Minus Query 49647 AATAATCTATCGGCTACAAATTCAACATATTGTGACATTAATTCACAATTCATACCCAAT 49706 || ||||| || || ||||||||||| ||||| |||| || ||||| ||||||||||| Sbjct 314327 AACAATCTGTCAGCAACAAATTCAACGTATTGACACATCAAGTCACAGTTCATACCCAAC 314268 Query 49707 AATTTAAATGGTAATGCATCA-TCAATAAATTCtttttctatttctacagcttgtttaat 49765 || || | ||| || |||||| | || | |||||| | || || || |||| | || Sbjct 314267 AACTTGACTGGCAAAGCATCAGTGAAGTATCTCTTTT-CAATGTCAACGGCTTCAGTGAT 314209 Query 49766 tatcataattatattattttttgataatttatatt--taatatgattcgcatatattaaA 49823 ||| | | | |||| || || | || | | ||| | ||| ||| Sbjct 314208 AATCTTGGCAACA--ATTTCTTCATCTGGGGTGTTGTTCAAGTGA---GAGAATAACAAA 314154 Query 49824 CATGCAAAATCAGTATGTAAACCCTCGTCCCTAGATATAAATTCATTACTAAAAGTTAAT 49883 || || ||||||||||| | ||| || || ||| | || ||||| ||| ||||| || Sbjct 314153 CAAGCGAAATCAGTATGCAGACCTTCATCTCTACAGATCAATTCGTTAGAGAAAGTCAAA 314094 Query 49884 CCTGGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAAAAGAAT 49943 |||||||| || |||||||| || | ||| || || | |||||| || ||| ||||| Sbjct 314093 CCTGGCATCAAACCTCTCTTCTTCAACCAGAAGATGGCAGCAAAAGAACCAGAGAAGAAA 314034 Query 49944 ATACCCTCGACACACGCAAATGCTATTATTCTTGCTCCAAACATTAATTTATCATCTAAT 50003 |||||||| ||| ||||| || | | |||| | ||||||| || ||||| | Sbjct 314033 ATACCCTCAACAGCAGCAAAGGCAACCAATCTTTCACCAAACAAAGCATTTTCATCAGAA 313974 Query 50004 ATCCAATTTATAGCCCAATCTGCtttttttttGATAGAAGGTATATTTTCTATAGCTTTA 50063 ||||| | | |||||| || ||||||| | ||||| | || | || || ||||| || Sbjct 313973 ATCCATCTCAAAGCCCAGTCCGCTTTTTCTCTGATACATGGAACGTTATCAATAGCATTG 313914 Query 50064 AATAATTCAtttttttCATNNNNNNNNNNNNNNNNNNNNNNNATTAATAAAGAATACATT 50123 ||||| || ||| | || |||| ||| || || Sbjct 313913 AATAAGAAATCAGCTTCCTTTGGATCCTTGACATAAGTGTCAATCAATAGAGAGTAAGTT 313854 Query 50124 TCAGAATGTACAGCTTCCATAGCTATTTGAAATGAATAAAATTGTCTTGCTTCTGAATAC 50183 ||||| || | |||||| ||||| || || || | ||||| | | Sbjct 313853 TCAGAGTGGATGTTTTCCATCATGATTTGGAAACCGTAGAAACACTTAGCTTCAGGAACT 313794 Query 50184 TGAACTTCGGAAAAGAATCGTTCAACTAAATTCTCAGATACAATACCATCAGATGCTGCG 50243 |||||||| | | |||| |||||| || || ||| ||||||||||| || || || Sbjct 313793 TGAACTTCAGCAGAGAAGTTTTCAACCAAGTTTTCATTGACAATACCATCGGAAGCAGCA 313734 Query 50244 AAGAATGCTAAAACGTATTTA-ATAAAATGTTTTTCATTATCTTTTAAATT----TTCCC 50298 ||||| || ||||| | | | || |||| | |||||||| | || || || |||| Sbjct 313733 AAGAAAGCCAAAAC-TCTAGACATGAAATATCTTTCATTAGCATTCAACTTGTTGTTCCA 313675 Query 50299 AAGATTCAAGATCGTTTGATAAATCTACTTCTTCTATTGTCCAAAATGATGCTACGGATT 50358 || ||| ||| || || ||||| | ||||| ||||| || || ||| | | Sbjct 313674 GTCATCCAA-ATCCTTAGACAAATCAATCTCTTCAGCAGTCCAGAAAGAAGCTTCTTGCT 313616 Query 50359 TTTTATACATTTG 50371 | || |||||||| Sbjct 313615 TCTTGTACATTTG 313603 >seq40 Length=167105 Score = 152 bits (168), Expect = 1e-31 Identities = 171/229 (75%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 192308 TACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAG 192367 |||||||||| | | ||| || || || | ||| | || || ||| || || |||| Sbjct 19992 TACCACCTCTCAATCTTAAAACCAAGTGAAGAGTTGATTCCTTTTGGATGTTGTAGTCAG 19933 Query 192368 ATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTG 192427 | || |||| |||| || ||||| |||||||| || |||||||||||||||||||||| Sbjct 19932 ACAARGTTCTACCATCTTCTAATTGCTTACCAGCGAAAATTAATCTCTGTTGATCAGGTG 19873 Query 192428 GTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTA 192487 | || || || |||||||| || || ||| || ||| || | || || ||||| | Sbjct 19872 GAATACCCTCCTTATCTTGGATCTTTGATTTAACGTTATCAATGGTGTCAGATGATTCAA 19813 Query 192488 CTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 |||| | ||| || || |||||||| |||||||||| ||| || ||||| Sbjct 19812 CTTCCAAAGTGATAGTCTTACCAGTCAATGTTTTAACAAAGATTTGCAT 19764 Score = 89.7 bits (98), Expect = 1e-12 Identities = 106/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 ||||||||||| | | || || || || | || | || || || || || ||| Sbjct 19765 ATACCACCTCTCAATCTCAACACCAAGTGAAGWGTTGATTCCTTTTGRATGTTGTAGTCA 19706 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || || |||| |||| || ||||| |||||||| || || ||||| ||||| |||||| Sbjct 19705 GACAARGTTCTACCATCTTCTAATTGCTTACCAGCGAAAATCAATCTTTGTTGGTCAGGT 19646 Query 192427 GGTATTCCTTCTTTATCTTGTATTTT 192452 || || ||||| |||||||| || || Sbjct 19645 GGAATACCTTCCTTATCTTGWATCTT 19620 >seq3 Length=1000385 Score = 141 bits (156), Expect = 2e-28 Identities = 177/240 (74%), Gaps = 2/240 (1%) Strand=Plus/Plus Query 192299 GTTTAATAATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCT-CTTTAGAGATA 192357 ||| ||| ||||||||||| | | || || || || ||||| | | |||| || || Sbjct 936283 GTTCAATGATACCACCTCTCAATCTCAAAACCAAGTGCAAAGTGGATTCCTTTTGA-ATG 936341 Query 192358 TTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGT 192417 || || || || || |||| | || |||||||| ||||| |||||||| ||||| ||| Sbjct 936342 TTGTAGTCGGACAAGGTTCTACCGTCTTCCAATTGCTTACCGGCAAAGATCAATCTTTGT 936401 Query 192418 TGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCT 192477 ||||||||||| || ||||| |||||||| || || || ||||| || | || Sbjct 936402 TGATCAGGTGGGATACCTTCCTTATCTTGGATCTTGGACTTGACATTGTCAATGGTGTCG 936461 Query 192478 GACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATT 192537 || ||||| ||||| | ||||| || |||||||| || || |||| ||| || |||||| Sbjct 936462 GAAGATTCAACTTCCAAGGTAATTGTCTTACCAGTCAAGGTCTTAACAAAAATTTGCATT 936521 >seq17 Length=626534 Score = 120 bits (132), Expect = 6e-22 Identities = 168/233 (72%), Gaps = 2/233 (1%) Strand=Plus/Plus Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTC-TTTAGAGATATTATAATCAG 192367 ||||||||| | | || || || || | ||| | || ||| || || || || |||| Sbjct 620749 ACCACCTCTCAATCTCAAAACCAAGTGAAGAGTGGATTCCTTTTGA-ATGTTGTAGTCAG 620807 Query 192368 ATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTG 192427 | || |||| |||| |||||||| ||||||||||| || ||||| ||||| ||||||| Sbjct 620808 ACAAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAAATCAATCTTTGTTGGTCAGGTG 620867 Query 192428 GTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTA 192487 | || ||||| || ||||| || || || ||||| || | || || ||||| | Sbjct 620868 GGATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAGGATTCGA 620927 Query 192488 CTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTTA 192540 | || | ||| ||||| ||||| || | || |||| ||| || ||||| ||| Sbjct 620928 CCTCCAAAGTGATGGTCTTACCTGTAAGGGTCTTAACAAAAATTTGCATCTTA 620980 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984478511589300