Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ambrosiozyma_20monospora_20[genbank_20GCA_5F001599995.1_202016-03-
01] 118 sequences; 24,978,438 total letters
Query= NC_021249.1
Length=282895
Score E
Sequences producing significant alignments: (Bits) Value
seq12 187 5e-42
seq40 140 6e-28
seq3 134 2e-26
seq17 129 1e-24
>seq12
Length=722896
Score = 187 bits (206), Expect = 5e-42
Identities = 372/543 (69%), Gaps = 11/543 (2%)
Strand=Plus/Minus
Query 38832 TTTTGGTATTCAGAAACttttttttCGAAAAAGTTTGTTTTTCCTTCTAATGATATTAAA 38891
||||| || ||||||||| | || ||||| ||||| || || || | || || ||
Sbjct 314444 TTTTGATAGTCAGAAACTCTCTTCTCGAAGAAGTTAGTCTTACCAGCCAAGGAAATATTT 314385
Query 38892 TTCATAAAATCAAATGGATTTTTGGTATTATA-ATATTTTTCTCCTATCAATACATATAA 38950
| ||| || || ||||| ||| || || || || || || | | ||| || ||
Sbjct 314384 TCCATGAAGTCGAATGGGTTTGTGACGTTGTAGATCTTCTTG-CATCCCAAAGCAACCAA 314326
Query 38951 TAATCTATCGGCCACAAATTCAACATATTGTAACATTAATTCACAATTCATACCCAATAA 39010
||||| || || ||||||||||| ||||| |||| || ||||| ||||||||||| ||
Sbjct 314325 CAATCTGTCAGCAACAAATTCAACGTATTGACACATCAAGTCACAGTTCATACCCAACAA 314266
Query 39011 TTTAAATGGTAATGCATCA-TCAATAAATTCtttttctatttctacagcttgtttaatta 39069
|| | ||| || |||||| | || | || ||||| || || || |||| | || |
Sbjct 314265 CTTGACTGGCAAAGCATCAGTGAAGTATCTC-TTTTCAATGTCAACGGCTTCAGTGATAA 314207
Query 39070 tcataattatattattttttga--taatttatatttaatatgattcgcatataGTAAACA 39127
|| | | | |||| || | | | | || | ||| | ||| |||||
Sbjct 314206 TCTTGGCAACA--ATTTCTTCATCTGGGGTGTTGTTCAAGTGA---GAGAATAACAAACA 314152
Query 39128 TGCAAAATCCGTATGTAAACCTTCGTCCCTAGATATAAATTCATTACTAAAAGTTAATCC 39187
|| ||||| ||||| | |||||| || ||| | || ||||| ||| ||||| || ||
Sbjct 314151 AGCGAAATCAGTATGCAGACCTTCATCTCTACAGATCAATTCGTTAGAGAAAGTCAAACC 314092
Query 39188 TGGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAAAAGAATAT 39247
|||||| || |||||||| || | ||| || || | |||||| || ||| ||||| ||
Sbjct 314091 TGGCATCAAACCTCTCTTCTTCAACCAGAAGATGGCAGCAAAAGAACCAGAGAAGAAAAT 314032
Query 39248 ACCCTCCACACACGCAAATGCTATTATTCTTGCTCCAAACATTAATTTATCATCTAAAAT 39307
|||||| ||| ||||| || | | |||| | ||||||| || ||||| ||||
Sbjct 314031 ACCCTCAACAGCAGCAAAGGCAACCAATCTTTCACCAAACAAAGCATTTTCATCAGAAAT 313972
Query 39308 CCAATTTATGGCCCAATCTGCtttttttttGATAGAAGGTATATTTTCTATAGCTTTAAA 39367
||| | | ||||| || ||||||| | ||||| | || | || || ||||| || ||
Sbjct 313971 CCATCTCAAAGCCCAGTCCGCTTTTTCTCTGATACATGGAACGTTATCAATAGCATTGAA 313912
Query 39368 TAA 39370
|||
Sbjct 313911 TAA 313909
>seq40
Length=167105
Score = 140 bits (154), Expect = 6e-28
Identities = 168/229 (73%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 171841 TACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTG 171900
|||||||||| | || ||| || || || | ||| | || || || || || || |
Sbjct 19992 TACCACCTCTCAATCTTAAAACCAAGTGAAGAGTTGATTCCTTTTGGATGTTGTAGTCAG 19933
Query 171901 ATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTG 171960
| || | || | || || ||||| |||||||| ||||||||||||||||| |||||||
Sbjct 19932 ACAARGTTCTACCATCTTCTAATTGCTTACCAGCGAAAATTAATCTCTGTTGATCAGGTG 19873
Query 171961 GTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTA 172020
| || || || |||||||| || || ||| || ||| || || || || ||||| |
Sbjct 19872 GAATACCCTCCTTATCTTGGATCTTTGATTTAACGTTATCAATGGTGTCAGATGATTCAA 19813
Query 172021 CTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
|||| | ||| || || |||||||| |||||||||| || || |||||
Sbjct 19812 CTTCCAAAGTGATAGTCTTACCAGTCAATGTTTTAACAAAGATTTGCAT 19764
Score = 93.3 bits (102), Expect = 8e-14
Identities = 128/182 (70%), Gaps = 0/182 (0%)
Strand=Plus/Minus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
||||||||||| | || || || || || | || | || || || || || ||
Sbjct 19765 ATACCACCTCTCAATCTCAACACCAAGTGAAGWGTTGATTCCTTTTGRATGTTGTAGTCA 19706
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
|| || | || | || || ||||| |||||||| ||||| ||||| ||||||||||||
Sbjct 19705 GACAARGTTCTACCATCTTCTAATTGCTTACCAGCGAAAATCAATCTTTGTTGGTCAGGT 19646
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || ||||| |||||||| || || || ||||| || || || || |||||
Sbjct 19645 GGAATACCTTCCTTATCTTGWATCTTGGACTTAACATTGTCAATGGTGTCAGATGATTCG 19586
Query 172020 AC 172021
||
Sbjct 19585 AC 19584
>seq3
Length=1000385
Score = 134 bits (148), Expect = 2e-26
Identities = 170/234 (73%), Gaps = 0/234 (0%)
Strand=Plus/Plus
Query 171837 ATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAA 171896
|| ||||||||||| | || || || || || ||||| | || || ||| || ||
Sbjct 936288 ATGATACCACCTCTCAATCTCAAAACCAAGTGCAAAGTGGATTCCTTTTGAATGTTGTAG 936347
Query 171897 TCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCA 171956
|| || || | || |||| |||||||| ||||| ||||| || ||||| ||||| |||
Sbjct 936348 TCGGACAAGGTTCTACCGTCTTCCAATTGCTTACCGGCAAAGATCAATCTTTGTTGATCA 936407
Query 171957 GGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGAT 172016
||||| || ||||| |||||||| || || || ||||| || || || || |||
Sbjct 936408 GGTGGGATACCTTCCTTATCTTGGATCTTGGACTTGACATTGTCAATGGTGTCGGAAGAT 936467
Query 172017 TCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATT 172070
|| ||||| | ||||| || |||||||| || || |||| || || ||||||
Sbjct 936468 TCAACTTCCAAGGTAATTGTCTTACCAGTCAAGGTCTTAACAAAAATTTGCATT 936521
>seq17
Length=626534
Score = 129 bits (142), Expect = 1e-24
Identities = 177/246 (72%), Gaps = 1/246 (0%)
Strand=Plus/Plus
Query 171834 TTCATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTA 171893
||| || ||||||||| | || || || || || | ||| | || || ||| ||
Sbjct 620741 TTCTTACCACCACCTCTCAATCTCAAAACCAAGTGAAGAGTGGATTCCTTTTGAATGTTG 620800
Query 171894 TAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGG 171953
|| || || |||| || | || |||||||| |||||||||||||| ||||| ||||||
Sbjct 620801 TAGTCAGACAAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAAATCAATCTTTGTTGG 620860
Query 171954 TCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGAC 172013
|||||||| || ||||| || ||||| || || || ||||| || || || ||
Sbjct 620861 TCAGGTGGGATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAG 620920
Query 172014 GATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTTA 172073
||||| || || | ||| ||||| ||||| || | || |||| || || ||||| |||
Sbjct 620921 GATTCGACCTCCAAAGTGATGGTCTTACCTGTAAGGGTCTTAACAAAAATTTGCATCTTA 620980
Query 172074 -TTATA 172078
|||||
Sbjct 620981 GTTATA 620986
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 905134664924400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |