Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ambrosiozyma_20monospora_20[genbank_20GCA_5F001599995.1_202016-03- 01] 118 sequences; 24,978,438 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq23 203 1e-46 seq17 131 5e-25 seq14 111 5e-19 seq42 93.3 1e-13 seq38 89.7 2e-12 >seq23 Length=373761 Score = 203 bits (224), Expect = 1e-46 Identities = 622/949 (66%), Gaps = 17/949 (2%) Strand=Plus/Minus Query 155587 CAATAGACGCCAGATTACATACCGCAGTCTCCTTGTCGTCGCTGTATTCTACAATCTCAC 155646 ||| ||| |||| ||||| || ||||| || | |||| ||||| ||||| |||| Sbjct 128981 CAACAGAAGCCAAGTTACAAACAGCAGTTTCAGTTGGGTCGGAATATTCAACAATTTCAC 128922 Query 155647 AGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTGTTACAAG 155706 | |||| ||| || |||||| || || ||||| |||||||| || ||||||||| Sbjct 128921 AACACAAGTTGGATGACTTGATAACACCCAAGTTCTTTTGGTTAGACTTTTTGTTACAAG 128862 Query 155707 CATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAATCTTTAGCC 155766 |||| ||||| | ||| | || || || || || | || || |||| || || Sbjct 128861 CATCTTTGTACAACATGAAAGGAGTACCAGTTTCAGTTTGAGCTTCCAAGATGGAGTACC 128802 Query 155767 AGAGGTCACGGGCATTAATTTGCTTGTTGTA--TCTGCCTTCCGACTCATATTTCATATA 155824 | | | | || |||| | ||| || ||| ||||| | ||||| || | || Sbjct 128801 ACAACTTTTGAGCCTTAACAG--TGGTTCTACCTCTACCTTCAGTTTCATACTTGGTGTA 128744 Query 155825 CAGCGTTCGGTAA-TCCTCACCGTAACAATCACTCAGTCCAGG-GCACTTATCGGGGCAA 155882 || | ||| || || ||||| ||| ||| | || || ||| | | || | Sbjct 128743 CAAC-TTCTCAAACTCATCACCATAAACCTCAGATAAACCTGGAGCA-TCAGAAGGTGAG 128686 Query 155883 AACAGCGACCAAATTTTATTACCGATTACACGCTC--CATAAATACATCACTCGCCCAAA 155940 |||| | ||| |||| |||| || ||| ||| || | ||| ||| | Sbjct 128685 AACAAAGTCCATTCAGAATTA--GATTCAACTCTCTTCATGAACAAATCTGGAATCCACA 128628 Query 155941 TAGCATAGAAAAGGTCCCTTGCCTTTGACTCCT-CATCGCCGTGATTCTTCCGTAGCTCT 155999 ||| ||| | || || || | ||| | || | | ||||||||||| | | || Sbjct 128627 AAGCTGGGAACAAATCTCTGGC-TCTGATTTCTTCTTTACCGTGATTCTTTCTGATATCA 128569 Query 156000 AAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTACCATTCCTC 156059 | || || || |||| || ||| || | ||| | |||||| |||| ||| Sbjct 128568 ATAAAGTCAAAGATGTCAGCGTGCCATGGTTCAATATAAAGGGCAAAAGCACCAGGTCTC 128509 Query 156060 TTG---CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAATA 156116 ||| ||||| ||||| ||||| | |||||| || ||||| || | | ||||||||| Sbjct 128508 TTGTTACCACCTTGATCAACATATCTAGCAGTATTGTTGAAAACTCTAACCATAGGAATG 128449 Query 156117 ATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAACATTATGA 156176 |||||||| ||||| || ||||| ||| || | ||||||| | | || || ||| Sbjct 128448 ATACCATTTGAAGTACCGTTGGTACCGGCGATGTAAGAACCAGTGGCTCTAATGTTGTGA 128389 Query 156177 ATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTACAGTATTG 156236 || ||||| ||||||||||||| |||||||| |||| || ||||| | |||| Sbjct 128388 ATGTGTAGACCAATACCACCTGCAGTCTTAGAAATCAGAGCACACTCCTTCAATGTATCA 128329 Query 156237 AAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTAATTGAGGT 156296 ||||||||||||||||||| || | ||| | | | | || || | ||| || Sbjct 128328 TAAATACCTTCAATAGAATCTTCCTTCATGGCAACCAAGAAACAAGAGGACATTTGTGGG 128269 Query 156297 CGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACTTATTAGACATA 156356 || || || |||||||| || | || || | ||||| | ||||| | | ||||| Sbjct 128268 CGAGGAGTACCAGCGTTAAACAAAGTTGGAGAAGCATGGGTGAAATATCTTTGGGACATC 128209 Query 156357 TAATCGTATGTCTCCTTAATCTTCTCAAGATTAGACCCGTGAATACAGATAGAGACCCTC 156416 | | ||| ||||| || || || ||| |||||||||| || | || ||| Sbjct 128208 AAGTTGTAAGTCTCTAAAACTTTAGGAATGTTATCACCGTGAATACCAATGGCAACTCTC 128149 Query 156417 ATCCACATATGCTGAGGACGCTCTACAATCACTCCATCAATTCGCAGAAGGTATGCGCGT 156476 || || ||| || || | || ||| | |||||||||| || ||| || | | | Sbjct 128148 ATGATCAAATGTTGTGGTCTTTCAGCAACCTTACCATCAATTCTCAAAAGATAGGATCTT 128089 Query 156477 TCCAGAGTTTTAAACCCGAAATAATCAAACAGAAAATCACGGTTGTAAT 156525 |||| ||| || || |||||||| | | | |||||||||| ||||| Sbjct 128088 TCCAAAGTCTTGAAACCGAAATAGTTGTATTGGAAATCACGGTCGTAAT 128040 >seq17 Length=626534 Score = 131 bits (144), Expect = 5e-25 Identities = 636/999 (64%), Gaps = 17/999 (2%) Strand=Plus/Minus Query 155385 ATATCC-ATCTTGAAAAATGTGTCGGCTAAACCCTGAACTCCAATACCGACTGGGCGATG 155443 |||||| || ||||||||||| || || ||||| ||||| |||| | | ||||| | ||| Sbjct 354663 ATATCCCATTTTGAAAAATGTATCAGCCAAACCTTGAACACCAACAGCCACTGGTCTATG 354604 Query 155444 CCTGTAATTGCTCCTGCTTGTCTTCTTGT-TTGGGTAAAAATTCACATCAATAATGTTAT 155502 ||| | || | |||| |||| || |||| ||| | ||||| || || || | Sbjct 354603 CCTTTTGTTTGAGCGACTTG-CTTCAGGTGTTGGATAAGCACCTACATCGATGATCTTGT 354545 Query 155503 TTAAATTTGTAACCAATACCTTGGTTACGTCTGCTAATTTCACATAGTCAAATGTTTTAT 155562 | || || |||||| | ||||| ||| | ||| | ||||| ||||| | Sbjct 354544 TCAAGTTCTTAACCACAATCTTGGCTACCTTATGTAAAGAATTAAAGTCATATGTTCCAG 354485 Query 155563 CCTCA---TTTACAAACATACCAAGACCAATAGACGCCAGATTACATACCGCAGTCTCCT 155619 || || |||||||| ||| || || || || || || || || || |||| Sbjct 354484 AGCCAGAGTTCACAAACATTGATAGAGAAACTGAAGCTAGGTTGCAGACAGCGGTTTCCT 354425 Query 155620 TGTCGTCGCTGTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAAT 155679 |||| || || || ||||| ||||| |||| |||||| |||||||| || | || Sbjct 354424 TGTCATCCGAATACTCCACAATTTCACAACACAAGTTAGATGATTTGATGGTTCCAAGAT 354365 Query 155680 TCTTCTGGTTAGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCT 155739 |||| || || ||||| ||||| ||||| ||||| || | |||| | ||||| | Sbjct 354364 TCTTTTGATTTGATTTCTCATTACATGCATCTTTGTAAAGTAAAAATGGATTCCCTGTTT 354305 Query 155740 CCATCTGTGCGTCCAGAATCTTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATC 155799 | | || ||| | | ||| |||| || | | ||| | | || | ||| Sbjct 354304 CTGTTTGAGCGACTAAAATAGCATGCCATAGTTTCTGTGCACTGACTTTTCGGACATATT 354245 Query 155800 TGCCTTCCGACTCATATTTCATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCA 155859 | ||||| | ||||||||| |||||| | | | || |||| || ||| | | Sbjct 354244 TTCCTTCAGCCTCATATTTGTTATACAACTTAACAAACTCGGCACCATACGTATCTGTTA 354185 Query 155860 GTCCAGGGCACTTATCGGGGCAAAACAGCGACCAAATTTTATTACCGATT--ACACGCTC 155917 ||||| || | || | |||||| ||||| | | || || || || Sbjct 354184 AGCCAGGACAACTGTCTTGAGAAAACAAACACCAA--TCTTCGGCCTTTTGAACTTTTTC 354127 Query 155918 CATAAATACATCACTCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGAC-TCCTCAT 155976 ||| || | || ||||| ||||| || | || |||| |||| || || || | Sbjct 354126 CATGAAAAGGTCTGATATCCAAAGGGCATAAAACAAATCTCTTG-CTTTCACTTCTTCCT 354068 Query 155977 CGCCGTGATTCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGAT 156036 || || ||||| | | || || ||||| |||||| | ||| || || |||| Sbjct 354067 TTCCATGGTTCTTTCTCAATTCCAAAAATTCAAAAATATCTGCATGCCAAGGTTCAAGAT 354008 Query 156037 ACATAGCAAAA--CTACCATTC--CTCTTGCCACCCTGATCTACATACCGAGCAGTCTTA 156092 | || |||||| || | || | || ||||| ||||| |||||| ||||| | Sbjct 354007 ATAT-GCAAAATGCTCCTGGTCTTTTATTACCACCTTGATCAACATACTTGGCAGTAGCA 353949 Query 156093 TTGAAGACACCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGC 156152 || || || | | ||| || | | ||| | || | ||||| ||||| || | Sbjct 353948 TTAAACACCCGCAACATCGGCACCAATCCACTTGACATTCCATTTGTTCCAGATATGTAG 353889 Query 156153 GAACCAGATGAGCGAACATTATGAATATGTAGTCCAATACCACCTGACCATTTAGAAATT 156212 ||| || | |||| ||| || ||||| ||||| |||||| | ||||| ||||| Sbjct 353888 CTACCCGAGGCACGAATATTTGAAACATGTAATCCAACACCACCAGCACATTTCGAAATA 353829 Query 156213 TGAGCGCATTCCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGT 156272 | || || | ||||| |||||||| || || || || || || | ||| | | Sbjct 353828 AGTGCTGTTTGATGAACAGTTTTGAAAATGCCATCGATGGAGTCGTCCTTCATAGCAACC 353769 Query 156273 AGATAGCACGAACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCA 156332 | | |||| || ||| || ||| || | || ||||| || || | |||| Sbjct 353768 AAAAAGCAAGAGGATAAGGATGGAATCTCTGTACCGGAGTAGAATAAAGTTGGAGATGCA 353709 Query 156333 TGAATAAAATACTTATTAGACATATAATCGTATGTCTCC 156371 || || ||||| || || ||||| | || || || ||| Sbjct 353708 TGGATGAAATATTTCTTTGACATTAACTCATAGGTTTCC 353670 >seq14 Length=679229 Score = 111 bits (122), Expect = 5e-19 Identities = 333/504 (66%), Gaps = 15/504 (3%) Strand=Plus/Minus Query 288852 ATCAAACCTACCAGAACGAGTTAATGCTGGGTCTAATATATCGGCTCTGTTTGTTGCTGC 288911 |||||| ||||| | | ||| || | ||| || | ||| |||||||| || | || Sbjct 85095 ATCAAATCTACCTGGTCTCAATAAAGCAGAGTCCAAAACATCAGCTCTGTTGGTACCAGC 85036 Query 288912 CAATACAACAATA-GATTCGGTTTGCTTAAATCCATCCATACTTGTTAAAATTTGATT-- 288968 || ||||||| | ||| | | | ||| |||||||| || | |||||| Sbjct 85035 TAAGACAACAACATGATCAGATGTAGAGAAA-CCATCCATTTCAACCAATAATTGATTTA 84977 Query 288969 AAGTGTTTGTTCCCTTTCATCATTTGAACCTCTTGAATCACCCGAATCGCTCCttttttt 289028 |||||||| || |||||||| || ||| || | ||| | | || | || Sbjct 84976 AAGTGTTT--TCTCTTTCATCGTTACCACCCATTCCCTTACCTTTACCTCT---TGACTT 84922 Query 289029 ACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATTGC 289088 ||||| |||||| ||||| |||| ||||| | | | |||| ||||| ||| ||| | Sbjct 84921 ACCAATAGCATCGATTTCATCAACGAAAACAATAGAAGGAGCATTTTCTCTAGCAGTCTT 84862 Query 289089 AAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAAGC 289148 || || ||||| || | || || |||| ||| ||| ||||||| || ||||||||| | Sbjct 84861 GAACAAATCTCTCACTCTAGAAGCACCAACACCGACAAACATTTCAACGAATTCAGAACC 84802 Query 289149 GGATACTTGAAT-GAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCT 289207 ||| || || | ||| | ||| ||||| || || |||| | || || | ||| | Sbjct 84801 GGAAACA-GAGTAGAACGGAACACCAGCTTCACCAGCAGTTGCCTTAGCGAGCAATGTTT 84743 Query 289208 TACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGCCCCAGCAGACT 289267 |||| || ||||| || || || | | || |||| | || || || || | Sbjct 84742 TACCGGTACCAGGAGGACCAGACAAAATGGCACCTCTTGGAATCTTAGCACCT--AGTTT 84685 Query 289268 T--ATATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTCATATTTTGCCTC 289325 | |||||| | ||| | || ||||| | || | ||| | || | ||| ||||| Sbjct 84684 TTCATATTTGGCTGGGTTTTTCAAAAACTTGACGAACTCCATGATCTCTTCTTTAGCCTC 84625 Query 289326 ATCACATCCTGCTACATCAGCAAA 289349 ||||| || || ||||||||||| Sbjct 84624 GTCACAACCAGCGACATCAGCAAA 84601 >seq42 Length=156912 Score = 93.3 bits (102), Expect = 1e-13 Identities = 220/328 (67%), Gaps = 6/328 (2%) Strand=Plus/Plus Query 289026 tttACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAAT 289085 |||||||| ||||||||||| || | || | | | || | ||||| ||| || | Sbjct 107967 TTTACCAATGGCATCAATTTCATCGACAAAGACAATGGATGGGGCATTTTCTCTAGCGGT 108026 Query 289086 TGCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGA 289145 || || || | || | || || || | |||||| |||| || ||||||||||| Sbjct 108027 CTTGAACAAGTCACGCACTCTAGAAGCACCCACACCAACGAACATCTCAACAAATTCAGA 108086 Query 289146 AGCGGATACTTGAAT-GAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTG 289204 | | || || || | ||||| ||| ||||| || || ||| | || ||||||| Sbjct 108087 ACCAGAAAC-AGAGTAGAATGGAACACCAGCTTCACCAGCAGTAGCCTTAGCTAGAAGTG 108145 Query 289205 TCTTACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGCCCCAGCAG 289264 ||||||| || ||||| || || ||| | | || |||| | || || || || Sbjct 108146 TCTTACCGGTACCAGGAGGACCAGATAAAATGGCACCTCTTGGAATCTTAGCACC--CAA 108203 Query 289265 ACTT--ATATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTCATATTTTGC 289322 ||| ||| || | ||| |||| || |||| |||| ||| | ||| | || || Sbjct 108204 TCTTTCATACTTGGCTGGGTTCTTCAAGAATTTCACAAACTCCATGATTTCTTCCTTGGC 108263 Query 289323 CTCATCACATCCTGCTACATCAGCAAAA 289350 |||||||| ||||| ||||| |||||| Sbjct 108264 TTCATCACAACCTGCAACATCTGCAAAA 108291 >seq38 Length=199180 Score = 89.7 bits (98), Expect = 2e-12 Identities = 124/170 (73%), Gaps = 4/170 (2%) Strand=Plus/Minus Query 302553 ATCATAACCAATCATAATGTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGT 302612 ||||||| || |||||| ||||||| | ||| | ||||| | |||||||||||||| Sbjct 23832 ATCATAATGAACCATAATATCTTCCAAAGCCTTCAACAAACGTCTTTGAATATAACCAGT 23773 Query 302613 TGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAA 302672 | | || || || || |||||||| | ||| | | |||| ||||||| |||||||| Sbjct 23772 TTCGGCAGTCTTGACGGCAGTATCAATCAAACCTTCTCTACCAGCCATAGCGTGGAAGAA 23713 Query 302673 TAGCTCTTCCGGTCGT--AGCCCCCCAATAAAGGAGCTCTCAACGAAACC 302720 | ||||| ||| || | || | ||| | | ||| | || |||||||| Sbjct 23712 GAACTCTTGAGGT-GTCAAACCTCTCAA-ATAAGAGTTTTCCACGAAACC 23665 Score = 89.7 bits (98), Expect = 2e-12 Identities = 107/142 (75%), Gaps = 5/142 (4%) Strand=Plus/Minus Query 301812 CAGAATTTC-TTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAG 301870 || |||||| || ||| | |||||||| || ||||| |||||| | ||||||| Sbjct 24591 CAAAATTTCCTTTAAT-CTAGGAACACCCAATGTGACGTT---CTTGGAAGACACACCAG 24536 Query 301871 CAAAGTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAA 301930 || | |||||||| |||| ||| | |||||||| || |||||||| ||| || |||| Sbjct 24535 CATAATGGAAAGTGTTCAAAGTCATTTGAGTAGCCGGTTCACCAATGGATTGAGCAGCAA 24476 Query 301931 TCATACCAACCATTTCTCCTGG 301952 | |||||||||||| ||||| Sbjct 24475 CGACACCAACCATTTCACCTGG 24454 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471815374795766