Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ambrosiozyma_20monospora_20[genbank_20GCA_5F001599995.1_202016-03-
01] 118 sequences; 24,978,438 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq3 145 7e-30
seq17 138 1e-27
seq40 127 2e-24
>seq3
Length=1000385
Score = 145 bits (160), Expect = 7e-30
Identities = 170/230 (74%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 24701 ACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCC 24760
|| ||||| || ||| |||| || | || ||||| || ||||| | ||||| ||| |
Sbjct 936523 ACAATGCAAATTTTTGTTAAGACCTTGACTGGTAAGACAATTACCTTGGAAGTTGAATCT 936464
Query 24761 ACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGAT 24820
||||||| | || | || || ||||||||||| || ||||| || || || |||
Sbjct 936463 TCCGACACCATTGACAATGTCAAGTCCAAGATCCAAGATAAGGAAGGTATCCCACCTGAT 936404
Query 24821 CAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTAT 24880
|||||| | |||||||||||||| || || |||| || |||| | |||| || ||
Sbjct 936403 CAACAAAGATTGATCTTTGCCGGTAAGCAATTGGAAGACGGTAGAACCTTGTCCGACTAC 936344
Query 24881 AACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
||||||||||||||||| || | |||||||| ||| ||||| | || ||
Sbjct 936343 AACATTCAAAAGGAATCCACTTTGCACTTGGTTTTGAGATTGAGAGGTGG 936294
>seq17
Length=626534
Score = 138 bits (152), Expect = 1e-27
Identities = 171/234 (73%), Gaps = 0/234 (0%)
Strand=Plus/Minus
Query 24700 TACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGC 24759
|| |||||| || ||| |||| || || || ||||| || || || | || || ||| |
Sbjct 620980 TAAGATGCAAATTTTTGTTAAGACCCTTACAGGTAAGACCATCACTTTGGAGGTCGAATC 620921
Query 24760 CACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGA 24819
| | ||||| | || | || || |||||||||||||| ||||| || || || ||
Sbjct 620920 CTCTGACACCATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATCCCACCTGA 620861
Query 24820 TCAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTA 24879
|||||| | ||||| ||||| || || || |||| ||| |||| |||| || ||
Sbjct 620860 CCAACAAAGATTGATTTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCTGACTA 620801
Query 24880 TAACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCGG 24933
||||||||||||||||| || || |||||||| ||| ||||| | || || ||
Sbjct 620800 CAACATTCAAAAGGAATCCACTCTTCACTTGGTTTTGAGATTGAGAGGTGGTGG 620747
>seq40
Length=167105
Score = 127 bits (140), Expect = 2e-24
Identities = 166/228 (73%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| |||||| ||||||| | || ||||| ||||| || | ||||| ||| | |
Sbjct 19764 ATGCAAATCTTTGTTAAAACATTGACTGGTAAGACTATCACTTTGGAAGTTGAATCATCT 19823
Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| | || |||| |||| |||| ||||||||| || || || || || || |||||
Sbjct 19824 GACACCATTGATAACGTTAAATCAAA-GATCCAAGATAAGGAGGGTATTCCACCTGATCA 19882
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
||| | || || || || || || || | || ||| |||| |||| || || ||
Sbjct 19883 ACAGAGATTAATTTTCGCTGGTAAGCAATTAGAAGATGGTAGAACYTTGTCTGACTACAA 19942
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
||| ||||||||||| || || |||||||| || ||||| | || ||
Sbjct 19943 CATCCAAAAGGAATCAACTCTTCACTTGGTTTTAAGATTGAGAGGTGG 19990
Score = 102 bits (112), Expect = 7e-17
Identities = 107/143 (75%), Gaps = 0/143 (0%)
Strand=Plus/Plus
Query 24788 AAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAA 24847
||||| ||||| || ||||| || || || || |||||| | ||||| || || || ||
Sbjct 19620 AAGATWCAAGATAAGGAAGGTATTCCACCTGACCAACAAAGATTGATTTTCGCTGGTAAG 19679
Query 24848 CAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACAC 24907
|| | || ||| |||| |||| || || ||||| ||||||||||| || || |||
Sbjct 19680 CAATTAGAAGATGGTAGAACYTTGTCTGACTACAACATYCAAAAGGAATCAACWCTTCAC 19739
Query 24908 TTGGTGTTGCGATTGCGCGGAGG 24930
||||||||| ||||| | || ||
Sbjct 19740 TTGGTGTTGAGATTGAGAGGTGG 19762
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449896936401040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |