Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ambrosiozyma_20monospora_20[genbank_20GCA_5F001599995.1_202016-03- 01] 118 sequences; 24,978,438 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq3 145 7e-30 seq17 138 1e-27 seq40 127 2e-24 >seq3 Length=1000385 Score = 145 bits (160), Expect = 7e-30 Identities = 170/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 24701 ACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCC 24760 || ||||| || ||| |||| || | || ||||| || ||||| | ||||| ||| | Sbjct 936523 ACAATGCAAATTTTTGTTAAGACCTTGACTGGTAAGACAATTACCTTGGAAGTTGAATCT 936464 Query 24761 ACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGAT 24820 ||||||| | || | || || ||||||||||| || ||||| || || || ||| Sbjct 936463 TCCGACACCATTGACAATGTCAAGTCCAAGATCCAAGATAAGGAAGGTATCCCACCTGAT 936404 Query 24821 CAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTAT 24880 |||||| | |||||||||||||| || || |||| || |||| | |||| || || Sbjct 936403 CAACAAAGATTGATCTTTGCCGGTAAGCAATTGGAAGACGGTAGAACCTTGTCCGACTAC 936344 Query 24881 AACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||||||||||||||||| || | |||||||| ||| ||||| | || || Sbjct 936343 AACATTCAAAAGGAATCCACTTTGCACTTGGTTTTGAGATTGAGAGGTGG 936294 >seq17 Length=626534 Score = 138 bits (152), Expect = 1e-27 Identities = 171/234 (73%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 24700 TACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGC 24759 || |||||| || ||| |||| || || || ||||| || || || | || || ||| | Sbjct 620980 TAAGATGCAAATTTTTGTTAAGACCCTTACAGGTAAGACCATCACTTTGGAGGTCGAATC 620921 Query 24760 CACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGA 24819 | | ||||| | || | || || |||||||||||||| ||||| || || || || Sbjct 620920 CTCTGACACCATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATCCCACCTGA 620861 Query 24820 TCAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTA 24879 |||||| | ||||| ||||| || || || |||| ||| |||| |||| || || Sbjct 620860 CCAACAAAGATTGATTTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCTGACTA 620801 Query 24880 TAACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCGG 24933 ||||||||||||||||| || || |||||||| ||| ||||| | || || || Sbjct 620800 CAACATTCAAAAGGAATCCACTCTTCACTTGGTTTTGAGATTGAGAGGTGGTGG 620747 >seq40 Length=167105 Score = 127 bits (140), Expect = 2e-24 Identities = 166/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| |||||| ||||||| | || ||||| ||||| || | ||||| ||| | | Sbjct 19764 ATGCAAATCTTTGTTAAAACATTGACTGGTAAGACTATCACTTTGGAAGTTGAATCATCT 19823 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || |||| |||| |||| ||||||||| || || || || || || ||||| Sbjct 19824 GACACCATTGATAACGTTAAATCAAA-GATCCAAGATAAGGAGGGTATTCCACCTGATCA 19882 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 ||| | || || || || || || || | || ||| |||| |||| || || || Sbjct 19883 ACAGAGATTAATTTTCGCTGGTAAGCAATTAGAAGATGGTAGAACYTTGTCTGACTACAA 19942 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||| ||||||||||| || || |||||||| || ||||| | || || Sbjct 19943 CATCCAAAAGGAATCAACTCTTCACTTGGTTTTAAGATTGAGAGGTGG 19990 Score = 102 bits (112), Expect = 7e-17 Identities = 107/143 (75%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 24788 AAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAA 24847 ||||| ||||| || ||||| || || || || |||||| | ||||| || || || || Sbjct 19620 AAGATWCAAGATAAGGAAGGTATTCCACCTGACCAACAAAGATTGATTTTCGCTGGTAAG 19679 Query 24848 CAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACAC 24907 || | || ||| |||| |||| || || ||||| ||||||||||| || || ||| Sbjct 19680 CAATTAGAAGATGGTAGAACYTTGTCTGACTACAACATYCAAAAGGAATCAACWCTTCAC 19739 Query 24908 TTGGTGTTGCGATTGCGCGGAGG 24930 ||||||||| ||||| | || || Sbjct 19740 TTGGTGTTGAGATTGAGAGGTGG 19762 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449896936401040