Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ambrosiozyma_20monospora_20[genbank_20GCA_5F001599995.1_202016-03-
01] 118 sequences; 24,978,438 total letters
Query= NC_023442.1
Length=120420
Score E
Sequences producing significant alignments: (Bits) Value
seq17 129 5e-25
seq40 127 2e-24
seq3 123 2e-23
>seq17
Length=626534
Score = 129 bits (142), Expect = 5e-25
Identities = 167/231 (72%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| || ||||| | || ||||| ||||| |||||||| ||||||||||| || || |
Sbjct 620750 CCACCTCTCAATCTCAAAACCAAGTGAAGAGTGGATTCCTTTTGAATGTTGTAGTCAGAC 620809
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| || | | ||| || | ||| || |||||| | ||||||||||| || || || ||
Sbjct 620810 AAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAAATCAATCTTTGTTGGTCAGGTGGG 620869
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739
||||| || |||||||| | || |||||| | || | |||||||| ||| ||
Sbjct 620870 ATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAGGATTCGACC 620929
Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTTA 29790
|| | ||| || || || || || | ||| |||||||| || ||||| |||
Sbjct 620930 TCCAAAGTGATGGTCTTACCTGTAAGGGTCTTAACAAAAATTTGCATCTTA 620980
>seq40
Length=167105
Score = 127 bits (140), Expect = 2e-24
Identities = 164/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| || ||||| | | ||||| ||||| || ||||| ||||| ||||| || || |
Sbjct 19990 CCACCTCTCAATCTTAAAACCAAGTGAAGAGTTGATTCCTTTTGGATGTTGTAGTCAGAC 19931
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| || | | ||| || | ||| || ||||| | || ||||| || ||||| || |||
Sbjct 19930 AARGTTCTACCATCTTCTAATTGCTTACCAGCGAAAATTAATCTCTGTTGATCAGGTGGA 19871
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739
|||||||| || ||||| | ||| ||| || | || | |||||||| ||| |||
Sbjct 19870 ATACCCTCCTTATCTTGGATCTTTGATTTAACGTTATCAATGGTGTCAGATGATTCAACT 19811
Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| | ||| ||||| || ||||| || ||||||||||| || |||||
Sbjct 19810 TCCAAAGTGATAGTCTTACCAGTCAATGTTTTAACAAAGATTTGCAT 19764
Score = 91.5 bits (100), Expect = 1e-13
Identities = 121/170 (71%), Gaps = 0/170 (0%)
Strand=Plus/Minus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| || ||||| | || |||||| ||||| || ||||| ||||| ||||| || || |
Sbjct 19762 CCACCTCTCAATCTCAACACCAAGTGAAGWGTTGATTCCTTTTGRATGTTGTAGTCAGAC 19703
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| || | | ||| || | ||| || ||||| | ||||||||||| || || || |||
Sbjct 19702 AARGTTCTACCATCTTCTAATTGCTTACCAGCGAAAATCAATCTTTGTTGGTCAGGTGGA 19643
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGA 29729
||||| || || ||||| | || || ||| | || | ||||||||
Sbjct 19642 ATACCTTCCTTATCTTGWATCTTGGACTTAACATTGTCAATGGTGTCAGA 19593
>seq3
Length=1000385
Score = 123 bits (136), Expect = 2e-23
Identities = 164/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| || ||||| | || ||||| || | |||||||| ||||||||||| || || |
Sbjct 936294 CCACCTCTCAATCTCAAAACCAAGTGCAAAGTGGATTCCTTTTGAATGTTGTAGTCGGAC 936353
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| ||| | | || || | ||| || || ||| | ||||||||||| ||||| || ||
Sbjct 936354 AAGGTTCTACCGTCTTCCAATTGCTTACCGGCAAAGATCAATCTTTGTTGATCAGGTGGG 936413
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739
||||| || || ||||| | || |||||| | || | ||||| ||| ||| |||
Sbjct 936414 ATACCTTCCTTATCTTGGATCTTGGACTTGACATTGTCAATGGTGTCGGAAGATTCAACT 936473
Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787
|| | || || || || ||||| ||||| |||||||| || ||||||
Sbjct 936474 TCCAAGGTAATTGTCTTACCAGTCAAGGTCTTAACAAAAATTTGCATT 936521
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 385218646006638
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |