Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ambrosiozyma_20monospora_20[genbank_20GCA_5F001599995.1_202016-03- 01] 118 sequences; 24,978,438 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq17 129 5e-25 seq40 127 2e-24 seq3 123 2e-23 >seq17 Length=626534 Score = 129 bits (142), Expect = 5e-25 Identities = 167/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || ||||| | || ||||| ||||| |||||||| ||||||||||| || || | Sbjct 620750 CCACCTCTCAATCTCAAAACCAAGTGAAGAGTGGATTCCTTTTGAATGTTGTAGTCAGAC 620809 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || | | ||| || | ||| || |||||| | ||||||||||| || || || || Sbjct 620810 AAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAAATCAATCTTTGTTGGTCAGGTGGG 620869 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 ||||| || |||||||| | || |||||| | || | |||||||| ||| || Sbjct 620870 ATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAGGATTCGACC 620929 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTTA 29790 || | ||| || || || || || | ||| |||||||| || ||||| ||| Sbjct 620930 TCCAAAGTGATGGTCTTACCTGTAAGGGTCTTAACAAAAATTTGCATCTTA 620980 >seq40 Length=167105 Score = 127 bits (140), Expect = 2e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || ||||| | | ||||| ||||| || ||||| ||||| ||||| || || | Sbjct 19990 CCACCTCTCAATCTTAAAACCAAGTGAAGAGTTGATTCCTTTTGGATGTTGTAGTCAGAC 19931 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || | | ||| || | ||| || ||||| | || ||||| || ||||| || ||| Sbjct 19930 AARGTTCTACCATCTTCTAATTGCTTACCAGCGAAAATTAATCTCTGTTGATCAGGTGGA 19871 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 |||||||| || ||||| | ||| ||| || | || | |||||||| ||| ||| Sbjct 19870 ATACCCTCCTTATCTTGGATCTTTGATTTAACGTTATCAATGGTGTCAGATGATTCAACT 19811 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || | ||| ||||| || ||||| || ||||||||||| || ||||| Sbjct 19810 TCCAAAGTGATAGTCTTACCAGTCAATGTTTTAACAAAGATTTGCAT 19764 Score = 91.5 bits (100), Expect = 1e-13 Identities = 121/170 (71%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || ||||| | || |||||| ||||| || ||||| ||||| ||||| || || | Sbjct 19762 CCACCTCTCAATCTCAACACCAAGTGAAGWGTTGATTCCTTTTGRATGTTGTAGTCAGAC 19703 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || | | ||| || | ||| || ||||| | ||||||||||| || || || ||| Sbjct 19702 AARGTTCTACCATCTTCTAATTGCTTACCAGCGAAAATCAATCTTTGTTGGTCAGGTGGA 19643 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGA 29729 ||||| || || ||||| | || || ||| | || | |||||||| Sbjct 19642 ATACCTTCCTTATCTTGWATCTTGGACTTAACATTGTCAATGGTGTCAGA 19593 >seq3 Length=1000385 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || ||||| | || ||||| || | |||||||| ||||||||||| || || | Sbjct 936294 CCACCTCTCAATCTCAAAACCAAGTGCAAAGTGGATTCCTTTTGAATGTTGTAGTCGGAC 936353 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||| | | || || | ||| || || ||| | ||||||||||| ||||| || || Sbjct 936354 AAGGTTCTACCGTCTTCCAATTGCTTACCGGCAAAGATCAATCTTTGTTGATCAGGTGGG 936413 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 ||||| || || ||||| | || |||||| | || | ||||| ||| ||| ||| Sbjct 936414 ATACCTTCCTTATCTTGGATCTTGGACTTGACATTGTCAATGGTGTCGGAAGATTCAACT 936473 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 || | || || || || ||||| ||||| |||||||| || |||||| Sbjct 936474 TCCAAGGTAATTGTCTTACCAGTCAAGGTCTTAACAAAAATTTGCATT 936521 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385218646006638