Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ambrosiozyma_20monospora_20[genbank_20GCA_5F001599995.1_202016-03- 01] 118 sequences; 24,978,438 total letters Query= NC_023611.1 Length=198533 Score E Sequences producing significant alignments: (Bits) Value seq20 143 3e-29 seq17 93.3 5e-14 seq38 84.2 3e-11 >seq20 Length=536142 Score = 143 bits (158), Expect = 3e-29 Identities = 204/286 (71%), Gaps = 1/286 (0%) Strand=Plus/Minus Query 168519 ATTCTTAAAGAACTTTTATGGGTTATAAAAGGTTCAACTGATTCAAAACAATTAAATGAT 168578 |||||| | |||||| ||||| ||||| ||| || || || | |||| | Sbjct 410238 ATTCTTCATGAACTTCTATGGTTTATATCCGGTAAGACAGACGGTAAGCTATTATCAGCC 410179 Query 168579 ATAGGTGTTAAAGTTTGGAACGATAATGGTTCTCGTGAATTTTTAGATTTATGTGGTTTT 168638 | |||||||||| ||||| | | |||||| || | || | || |||| | || || Sbjct 410178 AAAGGTGTTAAAATTTGGGAAGGTAATGGATCAAGAGAGTACTTGGATTCCTTAGGATTA 410119 Query 168639 ACCGAAAGAAAAGAAGGTGATTTAGGTCCAATTTATGGATTTCAATGGAGACATGCAGGA 168698 || | |||| ||||||||| ||||||||| | |||||||| |||||||||||| || Sbjct 410118 ACTCACAGAAGAGAAGGTGACTTAGGTCCAGTGTATGGATTCCAATGGAGACATTTCGGT 410059 Query 168699 GCTCAATATATTGACTGTGATACAGATTACACCGGACAAGGAGTAGACCAATTAAGTCAA 168758 || |||| | ||||||||| |||| ||||| |||||||| | || ||| | |||| Sbjct 410058 GCGGAATACAAGGACTGTGATGCAGACTACACAGGACAAGGTTTTGATCAACTCGCTCAA 409999 Query 168759 ACTATAAATACTTTACACAACAATCCGGAAAATAGAAGAAT-ATTA 168803 || ||||| || | |||||||| | |||||||||| |||| Sbjct 409998 GTCATCAATACATTGAAAAACAATCCATATGATAGAAGAATCATTA 409953 >seq17 Length=626534 Score = 93.3 bits (102), Expect = 5e-14 Identities = 198/293 (68%), Gaps = 2/293 (1%) Strand=Plus/Minus Query 193756 TGTATTGTGGGTTTACTGGTAAAAGAATTGAAAATAAAATTTTTATAGGGCCAACTTATT 193815 ||||| |||| |||||||| || | | || | | ||||| | || || | ||| | Sbjct 361235 TGTATAGTGGTATTACTGGTGAATGTTTACAAGCTTACATTTTCTTTGGTCCTATTTACT 361176 Query 193816 ATCATCGTCTTAAACATATGGTTAAGGATAAAATGCATGCTAGAAGTCATGGAC-AAGTG 193874 |||| | || |||||||| |||||| ||||| || ||| | || | ||| | Sbjct 361175 ATCAAAAGTTGAAGCATATGGTGTTGGATAAGATGCACGCCAGAGCTAGAGGTCCAAGAG 361116 Query 193875 ACTACTTTACATCGACAACCAAATTGTGGTCGTTCTCAAGGTGGAGGTTTAAGATTTGGA 193934 || ||| ||||||||| ||| | ||| || ||| ||||| ||||| ||| Sbjct 361115 -CTGTGTTAACGAGACAACCAACAGAAGGTAGATCTAGAGATGGTGGTTTGAGATTGGGA 361057 Query 193935 GAAATGGAGAAAGACTGTATTTTAGTTCATGGTGCTACTCAATTCTTGAATGAAAGAATG 193994 |||||||||| ||| ||| || | | | | ||||| ||||||| || || ||| | Sbjct 361056 GAAATGGAGAGAGATTGTGTTATTGCTTACGGTGCCTCTCAATTATTATTGGAGAGATTA 360997 Query 193995 TTTTTGTATTCTGATCCTTTTCAAGTCGATGTTTGCACAGAATGTGGTATGAT 194047 | ||| ||||||| | ||| | ||||||||||| | ||| ||| |||| Sbjct 360996 ATGTTGAGTTCTGATGCCTTTGATGTCGATGTTTGTAACACATGCGGTTTGAT 360944 Score = 86.0 bits (94), Expect = 8e-12 Identities = 107/147 (73%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 193445 ACCTGAAATAGGGGATAAATTTTGTTCAGGAATGGCCCAAAAAGGAACTTGTGGTATGAT 193504 ||| ||| |||| ||||| |||| ||| || | ||||| || ||||||||| || Sbjct 361531 ACCCGAATTAGGTGATAAGTTTTCCTCAAGACACGGTCAAAAGGGTGTTTGTGGTATTAT 361472 Query 193505 TTATTCACAAGAAGATATGCCATTTACAGCTTCAGGTATGGTACCAGATATTATTATTAA 193564 | |||||||||||||||||| | | | |||||| |||||||||||||| || Sbjct 361471 TGTGCAACAAGAAGATATGCCATTCAATGATCAAGGTATCTGCCCAGATATTATTATGAA 361412 Query 193565 TCCAAATTGTATTCCATCCAGAATGAC 193591 ||| || || | |||||| | ||||| Sbjct 361411 TCCGCATGGTTTCCCATCCCGTATGAC 361385 >seq38 Length=199180 Score = 84.2 bits (92), Expect = 3e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 51957 ACATTTAAAATGAATTTGGCTATGACTAAAGCATATAATGCTGATTTTGATGGGGATGAA 52016 || || | |||||| ||| | | |||| |||||||||| ||||| ||||| ||||| Sbjct 22678 ACTTTCAGAATGAACTTGTCCGTTACTACTCCATATAATGCCGATTTCGATGGTGATGAG 22737 Query 52017 ATGAATTTACATGTTCCTCAATCATATGGAGCTACTGCTGAATT 52060 |||||||| || ||||||||||| |||| | | | |||||||| Sbjct 22738 ATGAATTTGCACGTTCCTCAATCTTATGAAACCAGAGCTGAATT 22781 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635176663113040